BAC Information

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BAC

Clone NameB6Ng01-287F14
Chromosome8 (Build37)
Map Location 93,685,829 - 93,686,959
singlet/doubletsinglet
Overlap geneLOC100041222
Upstream geneTox3, LOC100041133, Chd9, LOC100041156, EG626231, Rbl2, Aktip, LOC667162
Downstream geneRpgrip1l, AJ237917, LOC100041254, LOC674324, LOC100040628, Irx3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-287F14.bB6Ng01-287F14.g
ACCGA085300GA085301
length1,129899
definitionB6Ng01-287F14.b B6Ng01-287F14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtctgggcagcacagacaggccacagctctagaaaagatcatt
ctggtgggtgtgtggacttgtttatattatggtcccgccctccctgcctg
ttgtgctgagctgtgtactaaacctaggacttcatgcattctgagctata
gtctcaccatgacagaccttcttgagttcataaactccaaggtgcctgca
ccactttaccagagggccaatcctgtcctttcccccagtgtcctccctac
agccggcctgctttttgtgctaaggggtaacatggccttaagtcttattt
ttctttcgaccgtgaacttggtctgccttttaaggttaatttagtccctt
tagcttcttgccctgttgtgtggggaacacccagagcacaacagaacgct
ccctgactctctacatggctggtatttcccactcactgtttgcttattgc
atgtggactctgtcaccacgtgggtaccgcacccactctgatttgctcct
tgagtgacccgctcattgcctctgtacctcaaataccatccatgggaatg
gaggtgtctggctctttgctatttccatatctaacctaaggaggaaatga
gaggcataaaccattttctgatgtcttaccagccttgaagtgctgaggtg
attttggtctttgttgagcaacaaacaaattagttttcatttggataagc
ctcgtttctgatgcctttcgttctggcctggccccactccacggctcagt
tactaaagtgactgtcaccagtgaggagatggagggagctataggtcaga
agttgtttgctaactagccagcttcgatttcttgcagactcagtggacac
aactgagcatagttggattcctcaaatcttctcaagttgatttttcagaa
ttgtcttaataacagtttgtctacctagctaacccatttatctacccgtg
aagttaagaaaacacctgggagctatctttaaggtacctcctcccactcc
cttgaggctccctctcttggcacaccccttaccacatatccttactcaga
gacgctccatacaggctactaattcccagtgatggtctacaccttacttc
tctaccaaatcagagaagtttgttctttg
gaattctgcactgaacctatctggtcctgggtatttttttggttgggaga
cttttaatgactgcttctatttcttccttccttccttcctttctttcttt
ctttttttttttttttttttttggttttttgaggcagagtttctctgtac
agccctggctgtcctggaactcactctgtagaccaggctggcctcgaact
cagaaatctgcctgcctttgcctcccaagtgctgggattaaaggcatgcg
ccaccatgcccggcacttctatttctttaagggttatgggattgtctaga
tggtttatctgatcctgatttaaccttggtacttggtatctgtctagaaa
attgtgcatttcactcagattctccagttttgtttaatataggcttttgt
agtaggatctgatgatttttggatttcctcagattctgttgttatatttc
ccttttcatttctgattttgtttattgggatactgtttctgtgccctctg
gttagtctggctaaggatttatctatcttgttgattttctcaaagaacca
gctcctggttttgttgattctttgtatagttctttttgtttctacttggt
tgatttttttcagccccgagtttgatttttttcctgccatctactcattt
tgggtgtatttacttgtttttgttctagagctttcaagtgtgctcttaag
ctgctagtgtatgctctctccagtttctttttggaggcactcagagcttt
gaatttttctcttagcactgctttcattgtgtcttgtaagtttgggtatg
ttgtaccctcattttcattaaattctaaaagtctaacttctttctttcct
ttatttcttccttgatcagttatcattgagtagagcatggttcagcttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_93685829_93686959
seq2: B6Ng01-287F14.b_46_1174 (reverse)

seq1  CAAAG-ACAAACTTCTCTGATTTTGTAGGAGAAGGTAGGTGTAGACCACT  49
      ||||| ||||||||||||||||| ||| ||||||  |||||||||||| |
seq2  CAAAGAACAAACTTCTCTGATTTGGTA-GAGAAGTAAGGTGTAGACCA-T  48

seq1  CACTGGGAATTAGTTACCCTTGTTTGGAGCGGTCTTCTGAGTAGGGATTT  99
      ||||||||||||||  ||  ||| |||||| ||| |||||||| |||| |
seq2  CACTGGGAATTAGTAGCC--TGTATGGAGC-GTC-TCTGAGTAAGGATAT  94

seq1  GTGTGTAGGGGTGTGCCCAAGGAGAGGG-GGCTCAAGGGAGTGG--AGAG  146
      |||   |||||||||||  | ||||||| | |||||||||||||   |||
seq2  GTGGTAAGGGGTGTGCC--AAGAGAGGGAGCCTCAAGGGAGTGGGAGGAG  142

seq1  GTACCCTAAAGATAGCT-CCAGGTGTTTTCTTAACTTCACGGGTAGATAA  195
      ||||| ||||||||||| ||||||||||||||||||||||||||||||||
seq2  GTACCTTAAAGATAGCTCCCAGGTGTTTTCTTAACTTCACGGGTAGATAA  192

seq1  ATGGGTTAGCTAGGTAGACAAACCTGTATTAAAGAC-ATTCTGAAAAATC  244
      |||||||||||||||||||||| ||||  | ||||| |||||||||||||
seq2  ATGGGTTAGCTAGGTAGACAAA-CTGTTATTAAGACAATTCTGAAAAATC  241

seq1  AACTTGAGAAGATTTGAGGAAATCAACTATGCTCAGTTGTGTCCACTGAG  294
      |||||||||||||||||||||  |||||||||||||||||||||||||||
seq2  AACTTGAGAAGATTTGAGGAATCCAACTATGCTCAGTTGTGTCCACTGAG  291

seq1  TCTGC-AGAAATCGAAGCTGGCTAGTTAGCAAACAACTTCTGACCTATAG  343
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAAGAAATCGAAGCTGGCTAGTTAGCAAACAACTTCTGACCTATAG  341

seq1  CTCCCTCCATCTCCTCACTGGTGACAGTCACTTTAGTAACTGAGCCGTGG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTCCATCTCCTCACTGGTGACAGTCACTTTAGTAACTGAGCCGTGG  391

seq1  AGTGGGGCCAGGCCAGAACGAAAGGCATCAGAAACGAGGCTTATCCAAAT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGGCCAGGCCAGAACGAAAGGCATCAGAAACGAGGCTTATCCAAAT  441

seq1  GAAAACTAATTTGTTTGTTGCTCAACAAAGACCAAAATCACCTCAGCACT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACTAATTTGTTTGTTGCTCAACAAAGACCAAAATCACCTCAGCACT  491

seq1  TCAAGGCTGGTAAGACATCAGAAAATGGTTTATGCCTCTCATTTCCTCCT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGCTGGTAAGACATCAGAAAATGGTTTATGCCTCTCATTTCCTCCT  541

seq1  TAGGTTAGATATGGAAATAGCAAAGAGCCAGACACCTCCATTCCCATGGA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTAGATATGGAAATAGCAAAGAGCCAGACACCTCCATTCCCATGGA  591

seq1  TGGTATTTGAGGTACAGAGGCAATGAGCGGGTCACTCAAGGAGCAAATCA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATTTGAGGTACAGAGGCAATGAGCGGGTCACTCAAGGAGCAAATCA  641

seq1  GAGTGGGTGCGGTACCCACGTGGTGACAGAGTCCACATGCAATAAGCAAA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGGTGCGGTACCCACGTGGTGACAGAGTCCACATGCAATAAGCAAA  691

seq1  CAGTGAGTGGGAAATACCAGCCATGTAGAGAGTCAGGGAGCGTTCTGTTG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAGTGGGAAATACCAGCCATGTAGAGAGTCAGGGAGCGTTCTGTTG  741

seq1  TGCTCTGGGTGTTCCCCACACAACAGGGCAAGAAGCTAAAGGGACTAAAT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTGGGTGTTCCCCACACAACAGGGCAAGAAGCTAAAGGGACTAAAT  791

seq1  TAACCTTAAAAGGCAGACCAAGTTCACGGTCGAAAGAAAAATAAGACTTA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTTAAAAGGCAGACCAAGTTCACGGTCGAAAGAAAAATAAGACTTA  841

seq1  AGGCCATGTTACCCCTTAGCACAAAAAGCAGGCCGGCTGTAGGGAGGACA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCATGTTACCCCTTAGCACAAAAAGCAGGCCGGCTGTAGGGAGGACA  891

seq1  CTGGGGGAAAGGACAGGATTGGCCCTCTGGTAAAGTGGTGCAGGCACCTT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGGAAAGGACAGGATTGGCCCTCTGGTAAAGTGGTGCAGGCACCTT  941

seq1  GGAGTTTATGAACTCAAGAAGGTCTGTCATGGTGAGACTATAGCTCAGAA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTTATGAACTCAAGAAGGTCTGTCATGGTGAGACTATAGCTCAGAA  991

seq1  TGCATGAAGTCCTAGGTTTAGTACACAGCTCAGCACAACAGGCAGGGAGG  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGAAGTCCTAGGTTTAGTACACAGCTCAGCACAACAGGCAGGGAGG  1041

seq1  GCGGGACCATAATATAAACAAGTCCACACACCCACCAGAATGATCTTTTC  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGGACCATAATATAAACAAGTCCACACACCCACCAGAATGATCTTTTC  1091

seq1  TAGAGCTGTGGCCTGTCTGTGCTGCCCAGACTGAATTC  1131
      ||||||||||||||||||||||||||||||||||||||
seq2  TAGAGCTGTGGCCTGTCTGTGCTGCCCAGACTGAATTC  1129