BAC Information

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BAC

Clone NameB6Ng01-287N03
Chromosome8 (Build37)
Map Location 104,039,218 - 104,040,347
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042086, LOC100042092, LOC384895
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-287N03.bB6Ng01-287N03.g
ACCGA085641GA085642
length1,2391,112
definitionB6Ng01-287N03.b B6Ng01-287N03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcccctatactggttcatccagccttcacaggctcttcaaagaact
cccctcccattgatgcccaacaaggccatcctatgctacatatgcagctg
gagtcataggtcactccatgtgtactctggttggtgatttagttcctggg
agttctgggaaatctggttggtttatatttttgttcctcttatggggttg
cagaccccttcagctccttcagtccttcccctaactcctcttttgcagtc
ctgatgttcagactgatagttgactgagagtcataagcatctatatttgt
cagactctggcagagcctctcaggagacagctgtaacaggctcctgttag
caagcacgttttggcgttagccatagtgtatggatttggtgtctatatat
gggatgaatctcaaggtggggcagtgtctggatggtctttcctttaggct
ctgccccacactttgtcccagtatttcctttagacaagaacaattttggg
ttaaaaatttggagatgagtggatggctccattcctcaaccagggacctt
gcctaacctatggatatggctgctacaggttcgccctagtgtttgttggg
catttcagctaatctcatcaccattgggtcctgggagcctaatgctttcc
tgccatttgggactttctattggctacccatagtatatattacaggtata
ccatacaatccaataagccaagcaccttaaagaatatgcttaataaacag
aaatgggggacaaaaactcctagaaatagacagaaaaattccttattaac
attaagtgttttaattccaaaggggctagaaaaactgatgatgacagaca
ctggattgtagaaaaaaaaaaaacgttgaattagatcaacttgttataat
ttaaagatgttttagtatcagaatggacattaaagaacatatttcttttg
gagaaagttttccacaggtaataagaaagatccaatccaagttaagagaa
gcttccacatgaaagaaaaaactcaagaaagggagaaattgcagaaaaga
caaaaagtccacatcatttcagaaaggtttaccacacatgcatgagacag
ctcgaacagcaagctgagacggaatcatcgacttgttcgaagaagaaggc
ttgatacagaaatgccattgctgatacgatgactaggccgtggtatgcac
atgtgaccagaactttccatagaagacacattatattca

gaattctttggaaatggagttgcagacagttgtacactgcctgcagaggg
tgcagggaattggacctagcacttctacaagagcaataagtgctcttaac
tgcagcgacatctagccatctccagtttttggacattaaagtggatctat
tctaggtgtgcaagtgtgagtgctgaaaaatctgtgataaatccattgtg
aagtaaccatagcaaaatattctgaactacatcaaagtaataattgacct
cacaattttgtgaccacacgaaataattcaatgacctcactcacaaaaag
agacatgtataatataaagatgtattaagctatagactaatgatggcttt
tgttcttttgagattttttttaagtttataaatgaaatttaactaaatgg
tactactgtgcattcttcagattactacccacaaaaagcatgttttattg
tttttccatctaatccaactcctaggaaattcatgaagtacattgaaatt
caatgtgttgtatgaaattttcctgatatctttttgtcaaattgttgccc
ccacaactttcttcacataaacacccaggactttcagatgatgagttata
tgagcaaggtaaatgacaggaatggtgattttaatagtgattctttctat
atagaaagaatctgagataactcaagatcagacaacataaaaccttcaaa
atcatgactgtcttttacagaagtgtattctttcattttaggactatgtg
gcacaaaatagagtcattttggaagatcaaaattgagttgagaaaattac
ctcaacagattagcctaggtaagactgtagcacagtttcttgtttgatca
gcagtcagactgcctgagcactataaatagcaaggtgaggaagccatgaa
tcacagccataaggaacacttcttcatgatcttttgtatcagtttctgcc
tcagggtttctgtctgagtttctgcctgacttcttcagtgatatataaga
gaaatagtctttctcatagtgtcttttcaatatgtattttatcacagcag
tagaaatctagacactggataaaccgacatgggtagtgcctcataatctg
accatgtgtttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_104039218_104040347
seq2: B6Ng01-287N03.g_63_1174 (reverse)

seq1  AAAACACATGGTCAGATTAAAGTGAGGCACTACCCAATGGTCTGTTTAT-  49
      |||||||||||||||||||   ||||||||||||||   ||| |||||| 
seq2  AAAACACATGGTCAGATTA---TGAGGCACTACCCA--TGTCGGTTTATC  45

seq1  CAGTTTGTCTTAGATTTCTACTGCTGTGATAAAATACCATTATGAAAAGA  99
      |||  |||| |||||||||||||||||||||||||| |||  ||||||||
seq2  CAG--TGTC-TAGATTTCTACTGCTGTGATAAAATA-CATATTGAAAAGA  91

seq1  CACTTATGGAGGAAAGAATTTATTTCTCTTATATATCACTGAAGGAAGTC  149
      ||| ||||   ||||||   ||||||||||||||||||||||| ||||||
seq2  CAC-TATG--AGAAAGA--CTATTTCTCTTATATATCACTGAA-GAAGTC  135

seq1  AAGGCAGAAACTCAAGACAGAAACCCTGAGGCAGAAACTGATACAAAAGA  199
       |||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  -AGGCAGAAACTC-AGACAGAAACCCTGAGGCAGAAACTGATACAAAAGA  183

seq1  TCATGAAGAAGTGTTCCTTATGGCTTGTGATTCATGGCTTCCTCACCTTG  249
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TCATGAAGAAGTGTTCCTTATGGC-TGTGATTCATGGCTTCCTCACCTTG  232

seq1  CTATTTATAGTGCTCAGGCAGTCCTGACTGCTGATCAAACAAGAAACTGT  299
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CTATTTATAGTGCTCAGGCAGT-CTGACTGCTGATCAAACAAGAAACTGT  281

seq1  GCTACAGTCTTACCTAGGCTAATCTGTTGAGGTAATTTTCTCAACTCAAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACAGTCTTACCTAGGCTAATCTGTTGAGGTAATTTTCTCAACTCAAT  331

seq1  TTTGATCTTCCAAAATGACTCTATTTTGTGCCACATAGTCCTAAAATGAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATCTTCCAAAATGACTCTATTTTGTGCCACATAGTCCTAAAATGAA  381

seq1  AGAATACACTTCTGTAAAAGACAGTCATGATTTTGAAGGTTTTATGTTGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATACACTTCTGTAAAAGACAGTCATGATTTTGAAGGTTTTATGTTGT  431

seq1  CTGATCTTGAGTTATCTCAGATTCTTTCTATATAGAAAGAATCACTATTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCTTGAGTTATCTCAGATTCTTTCTATATAGAAAGAATCACTATTA  481

seq1  AAATCACCATTCCTGTCATTTACCTTGCTCATATAACTCATCATCTGAAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCACCATTCCTGTCATTTACCTTGCTCATATAACTCATCATCTGAAA  531

seq1  GTCCTGGGTGTTTATGTGAAGAAAGTTGTGGGGGCAACAATTTGACAAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGGGTGTTTATGTGAAGAAAGTTGTGGGGGCAACAATTTGACAAAA  581

seq1  AGATATCAGGAAAATTTCATACAACACATTGAATTTCAATGTACTTCATG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATCAGGAAAATTTCATACAACACATTGAATTTCAATGTACTTCATG  631

seq1  AATTTCCTAGGAGTTGGATTAGATGGAAAAACAATAAAACATGCTTTTTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCCTAGGAGTTGGATTAGATGGAAAAACAATAAAACATGCTTTTTG  681

seq1  TGGGTAGTAATCTGAAGAATGCACAGTAGTACCATTTAGTTAAATTTCAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTAGTAATCTGAAGAATGCACAGTAGTACCATTTAGTTAAATTTCAT  731

seq1  TTATAAACTTAAAAAAAATCTCAAAAGAACAAAAGCCATCATTAGTCTAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAACTTAAAAAAAATCTCAAAAGAACAAAAGCCATCATTAGTCTAT  781

seq1  AGCTTAATACATCTTTATATTATACATGTCTCTTTTTGTGAGTGAGGTCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTAATACATCTTTATATTATACATGTCTCTTTTTGTGAGTGAGGTCA  831

seq1  TTGAATTATTTCGTGTGGTCACAAAATTGTGAGGTCAATTATTACTTTGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATTATTTCGTGTGGTCACAAAATTGTGAGGTCAATTATTACTTTGA  881

seq1  TGTAGTTCAGAATATTTTGCTATGGTTACTTCACAATGGATTTATCACAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTTCAGAATATTTTGCTATGGTTACTTCACAATGGATTTATCACAG  931

seq1  ATTTTTCAGCACTCACACTTGCACACCTAGAATAGATCCACTTTAATGTC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCAGCACTCACACTTGCACACCTAGAATAGATCCACTTTAATGTC  981

seq1  CAAAAACTGGAGATGGCTAGATGTCGCTGCAGTTAAGAGCACTTATTGCT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAACTGGAGATGGCTAGATGTCGCTGCAGTTAAGAGCACTTATTGCT  1031

seq1  CTTGTAGAAGTGCTAGGTCCAATTCCCTGCACCCTCTGCAGGCAGTGTAC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTAGAAGTGCTAGGTCCAATTCCCTGCACCCTCTGCAGGCAGTGTAC  1081

seq1  AACTGTCTGCAACTCCATTTCCAAAGAATTC  1130
      |||||||||||||||||||||||||||||||
seq2  AACTGTCTGCAACTCCATTTCCAAAGAATTC  1112


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