BAC Information

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BAC

Clone NameB6Ng01-288C07
Chromosome8 (Build37)
Map Location 17,889,670 - 17,890,169
singlet/doubletsinglet
Overlap genenone
Upstream geneCsmd1
Downstream geneLOC665638, LOC100040466, Mcph1, Angpt2, Agpat5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-288C07.bB6Ng01-288C07.g
ACCGA085883GA085884
length4941,100
definitionB6Ng01-288C07.b B6Ng01-288C07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
attaaagtgtaaggcatctataaaagaacacaccaaaatataattaacta
agattattagaatccaaaagagaaattgatggacagagctgaaaaaggga
tagagcctttaatcccatgtcccaagaggcaaaggaaggcagatctctat
gagttccaggacagctgaagctacatagagaaaccttgcctaaaaattaa
ttaattagttagttaattaattaaaagttttgggccatgtagttaaaaat
gggagcaaatacaataaaattcaaaaaaataatttaatatatgttttatt
ttttgtttgttttttcccctctgacaatattgctgatgatattcaacttg
tgtctctagctgcatatgtatcagaagatggcctggttggccatcactgg
aaagagaggcccattggtcttgcaaactttatatgccccagtacagggga
acgccagggccaagaagtgggaatgggtgagtagggggtgggga
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcaaaatggctaagatcaaaaatcaggtgacagca
aatgctggcgtggatgtggagaaagaggaacactcctccattgttggtga
gattgcaggcttgtaccaccactctggaaatcagtctggcggttcctcag
aaaattggacatagtactaccggaggatccagcaatacctctcctgggca
tatgtccagaagatgccccaacgggtaagaaggacacatgctccactatg
ttcatagcagccttatttataatagccagaagctggaaagaacccagatg
cccctcaacagaggaatggatacagaaaatgtggtacatctacacaatgg
agtactactcagctattaaaaagaatgaatttatgaaattcctagccaaa
tggatggaccttgagggcatcatcctgagtgaggtaacacattcacaaag
gaactcacacaatatgtactcactgataagtggatattagccccaaacct
aggatacccaagatataagatacaatttgctaaacacatgaaactcaaga
agaatgaagactgaagtgtggacactatgcccctccttagaattgggaac
aaaacacccatggaaggagttacagagacaaagtttggagctgagatgaa
aggatggaccatgtagagactgccatatccagggatccaccccataatca
gcatccaaacgctgacaccattgcatacactagcaagattttattgaaag
gacccagatgtagctgtctcttgtgagagtacgctggggcctagcaaaca
cattaagtgggatgctcacagttcagctaatggatggatcacagggctcc
caatgcagaaagctagagaaagtagccaaggagctaaggggatctgcaac
ctattaggtggaacacatgatgaactaaccagtaccccggaagctcttga
ctctagttgcatatgttatccaaaaggaatggcctagcggcatcactgtg

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_17889670_17890169
seq2: B6Ng01-288C07.b_44_543

seq1  GAATTCATTAAAGTGTAAGGCATCTATAAAAGAACACACCAAAATATAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTAAAGTGTAAGGCATCTATAAAAGAACACACCAAAATATAAT  50

seq1  TAACTAAGATTATTAGAATCCAAAAGAGAAATTGATGGACAGAGCTGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTAAGATTATTAGAATCCAAAAGAGAAATTGATGGACAGAGCTGAAA  100

seq1  AAGGGATAGAGCCTTTAATCCCATGTCCCAAGAGGCAAAGGAAGGCAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGATAGAGCCTTTAATCCCATGTCCCAAGAGGCAAAGGAAGGCAGAT  150

seq1  CTCTATGAGTTCCAGGACAGCTGAAGCTACATAGAGAAACCTTGCCTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATGAGTTCCAGGACAGCTGAAGCTACATAGAGAAACCTTGCCTAAA  200

seq1  AATTAATTAATTAGTTAGTTAATTAATTAAAAGTTTTGGGCCATGTAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAATTAATTAGTTAGTTAATTAATTAAAAGTTTTGGGCCATGTAGTT  250

seq1  AAAAATGGGAGCAAATACAATAAAATTCAAAAAAATAATTTAATATATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGGGAGCAAATACAATAAAATTCAAAAAAATAATTTAATATATGT  300

seq1  TTTATTTTTTGTTTGTTTTTTCCCCTCTGACAATATTGCTGATGATATTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTTTGTTTGTTTTTTCCCCTCTGACAATATTGCTGATGATATTC  350

seq1  AACTTGTGTCTCTAGCTGCATATGTATCAGAAGATGGCCTGGTTGGCCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGTGTCTCTAGCTGCATATGTATCAGAAGATGGCCTGGTTGGCCAT  400

seq1  CACTGGAAAGAGAGGCCCATTGGTCTTGCAAACTTTATATGCCCCAGTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGAAAGAGAGGCCCATTGGTCTTGCAAACTTTATATGCCCCAGTAC  450

seq1  AGGGGAACGCCAGGGCCAAGAAGTGGGAATGGGTGAGTAGGGGGTGGGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAACGCCAGGGCCAAGAAGTGGGAATGGGTGAGTAGGGGGTGGGGA  500