MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-288E15
Chromosome	8 (Build37)
Map Location	88,820,705 - 88,968,570
singlet/doublet	doublet
Overlap gene	none
Upstream gene	Vps35, Orc6l, D830007F02Rik, 4921524J17Rik, Gpt2, Dnaja2, Neto2, Itfg1, LOC100040798, Phkb, LOC671665, LOC100040165
Downstream gene	Abcc12, Lonp2, Siah1a, ENSMUSG00000074178, BC004022, LOC666960, EG625298, EG330819
Link	Open Mouse BAC browser

Click to get alignment info.

name	Vps35 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:65114 MGI:1890467
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Orc6l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56452 MGI:1929285
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D830007F02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213435 MGI:2443063
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4921524J17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66714 MGI:1913964
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpt2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108682 MGI:1915391
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dnaja2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56445 MGI:1931882
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Neto2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74513 MGI:1921763
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Itfg1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71927 MGI:106419
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040798 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040798
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 ESTs, 5 Proteins pseudo : _no_value

name	Phkb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:102093 MGI:97578
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC671665 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:671665
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC100040165 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040165
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Abcc12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:244562 MGI:2441679
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lonp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66887 MGI:1914137
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Siah1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20437 MGI:108064
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	ENSMUSG00000074178 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666945 MGI:3704316
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs

name	BC004022 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:80750 MGI:2136825
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 142 ESTs, 5 Proteins

name	LOC666960 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666960
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	EG625298 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:625298 MGI:3647042
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 1246 ESTs, 6 Proteins

name	EG330819 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330819 MGI:3645880
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Vps35 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367507 GeneID:65114 MGI:1890467
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vacuolar protein sorting 35 transcript_id : NM_022997.3

name	Orc6l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:9790136 GeneID:56452 MGI:1929285
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : origin recognition complex, subunit 6-like (S. cerevisiae) transcript_id : NM_019716.1

name	D830007F02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142374524 GeneID:213435 MGI:2443063
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA D830007F02 gene transcript_id : NM_175441.4

name	4921524J17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142386323 GeneID:66714 MGI:1913964
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4921524J17 gene transcript_id : NM_025722.2

name	Gpt2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142369119 GeneID:108682 MGI:1915391
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutamic pyruvate transaminase (alanine aminotransferase) 2 transcript_id : NM_173866.2

name	Dnaja2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142382324 GeneID:56445 MGI:1931882
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DnaJ (Hsp40) homolog, subfamily A, member 2 transcript_id : NM_019794.2

name	Neto2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486762 GeneID:74513 MGI:1921763
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neuropilin (NRP) and tolloid (TLL)-like 2 transcript_id : NM_001081324.1

name	Itfg1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802868 GeneID:71927 MGI:106419
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : integrin alpha FG-GAP repeat containing 1 transcript_id : NM_028007.2

name	Phkb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40789095 GeneID:102093 MGI:97578
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphorylase kinase beta transcript_id : NM_199446.1

name	Abcc12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129935 GeneID:244562 MGI:2441679
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATP-binding cassette, sub-family C (CFTR/MRP), member 12 transcript_id : NM_172912.4

name	Lonp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981168 GeneID:66887 MGI:1914137
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lon peptidase 2, peroxisomal transcript_id : NM_025827.2

name	Siah1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6677946 GeneID:20437 MGI:108064
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : seven in absentia 1A transcript_id : NM_009172.1

name	ENSMUSG00000074178 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149258968 GeneID:666945 MGI:3704316
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs product : predicted gene, ENSMUSG00000074178 transcript_id : XM_987158.2

name	BC004022 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94383719 GeneID:80750 MGI:2136825
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 142 ESTs, 5 Proteins product : cDNA sequence BC004022, transcript variant 1 transcript_id : XM_894155.2

name	EG625298 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94383722 GeneID:625298 MGI:3647042
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 1246 ESTs, 6 Proteins product : predicted gene, EG625298 transcript_id : XM_889857.2

name	EG330819 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149258980 GeneID:330819 MGI:3645880
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : predicted gene, EG330819 transcript_id : XM_898721.3

name	Vps35 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13928670 GeneID:65114 MGI:1890467
definition	GO_component : GO:0016021 - integral to membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_process : GO:0015031 - protein transport [Evidence IEA]; GO:0045045 - secretory pathway [Evidence ISS]; GO:0006810 - transport [Evidence IEA]; GO:0006624 - vacuolar protein processing or maturation [Evidence ISS] codon_start : 1 note : maternal embryonic message 3 product : vacuolar protein sorting 35 protein_id : NP_075373.1

name	Orc6l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9790137 CCDS:CCDS22497.1 GeneID:56452 MGI:1929285
definition	GO_component : GO:0005664 - nuclear origin of replication recognition complex [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA] GO_process : GO:0006260 - DNA replication [Evidence IEA] codon_start : 1 exception : mismatches in translation note : origin recognition complex subunit 6 product : origin recognition complex subunit 6-like protein_id : NP_062690.1

name	D830007F02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83776559 GeneID:213435 MGI:2443063
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0004687 - myosin light chain kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 product : myosin light chain kinase protein_id : NP_780650.2

name	4921524J17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385182 CCDS:CCDS22498.1 GeneID:66714 MGI:1913964
definition	codon_start : 1 product : hypothetical protein LOC66714 protein_id : NP_079998.1

name	Gpt2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27805389 CCDS:CCDS22499.1 GeneID:108682 MGI:1915391
definition	GO_function : GO:0016847 - 1-aminocyclopropane-1-carboxylate synthase activity [Evidence IEA]; GO:0004021 - alanine transaminase activity [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016769 - transferase activity, transferring nitrogenous groups [Evidence IEA] GO_process : GO:0009058 - biosynthesis [Evidence IEA] codon_start : 1 product : glutamic pyruvate transaminase (alanine aminotransferase) 2 protein_id : NP_776291.1

name	Dnaja2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9789937 CCDS:CCDS22500.1 GeneID:56445 MGI:1931882
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0031072 - heat shock protein binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006457 - protein folding [Evidence IEA] codon_start : 1 note : DNA J protein product : DnaJ (Hsp40) homolog, subfamily A, member 2 protein_id : NP_062768.1

name	Neto2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486763 GeneID:74513 MGI:1921763
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 note : brain-specific transmembrane protein product : neuropilin- and tolloid-like protein 2 protein_id : NP_001074793.1

name	Itfg1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386278 GeneID:71927 MGI:106419
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] codon_start : 1 exception : mismatches in translation product : T-cell immunomodulatory protein protein_id : NP_082283.1

name	Phkb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40789096 CCDS:CCDS22501.1 GeneID:102093 MGI:97578
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005516 - calmodulin binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA] GO_process : GO:0005975 - carbohydrate metabolism [Evidence IEA]; GO:0005977 - glycogen metabolism [Evidence IEA] codon_start : 1 product : phosphorylase kinase beta protein_id : NP_955517.1

name	Abcc12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52138554 CCDS:CCDS22502.1 GeneID:244562 MGI:2441679
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0042626 - ATPase activity, coupled to transmembrane movement of substances [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 product : ATP-binding cassette, sub-family C (CFTR/MRP), member 12 protein_id : NP_766500.3

name	Lonp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385298 CCDS:CCDS22503.1 GeneID:66887 MGI:1914137
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA] codon_start : 1 product : peroxisomal lon protease protein_id : NP_080103.1

name	Siah1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677947 CCDS:CCDS22504.1 GeneID:20437 MGI:108064
definition	GO_function : GO:0016874 - ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] [Evidence IEA]; GO:0004842 - ubiquitin-protein ligase activity [Evidence TAS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0007049 - cell cycle [Evidence IEA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007141 - male meiosis I [Evidence IMP]; GO:0009791 - post-embryonic development [Evidence IMP]; GO:0040014 - regulation of body size [Evidence IMP]; GO:0007283 - spermatogenesis [Evidence IMP]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 product : seven in absentia 1A protein_id : NP_033198.1

name	ENSMUSG00000074178 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94383718 GeneID:666945 MGI:3704316
definition	codon_start : 1 product : hypothetical protein protein_id : XP_992252.1

name	BC004022 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94383720 GeneID:80750 MGI:2136825
definition	codon_start : 1 product : Nedd4 binding protein 1 isoform 1 protein_id : XP_899248.2

name	EG625298 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82918165 GeneID:625298 MGI:3647042
definition	codon_start : 1 product : hypothetical protein protein_id : XP_894950.1

name	EG330819 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82918167 GeneID:330819 MGI:3645880
definition	codon_start : 1 product : hypothetical protein protein_id : XP_903814.1

name	LOC671665 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671665
definition	number : 1 pseudo : _no_value

name	LOC100040165 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040165
definition	number : 3 pseudo : _no_value

name	LOC100040165 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040165
definition	number : 2 pseudo : _no_value

name	LOC100040165 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040165
definition	number : 1 pseudo : _no_value

name	LOC666960 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666960
definition	number : 1 pseudo : _no_value

name	LOC666960 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666960
definition	number : 2 pseudo : _no_value

name	LOC666960 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666960
definition	number : 3 pseudo : _no_value

name	LOC100040798 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149258979 GeneID:100040798
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 ESTs, 5 Proteins product : similar to F1Fo-ATPase subunit e pseudo : _no_value transcript_id : XR_032558.1

clone name	MSMg01-374P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515M13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-136F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-048K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-187O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-084H19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-271G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-308B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-523K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473K06
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-476C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-107H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-109B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309L20
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-288E15.b	B6Ng01-288E15.g
ACC	GA085991	GA085992
length	743	1,116
definition	B6Ng01-288E15.b	B6Ng01-288E15.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(88,820,705 - 88,821,446)	(88,967,467 - 88,968,570)
sequence	gaattctctctttacctttgtacccttttttttaattgggttatttgggt tgttggtgtctaacttcttgagttctttatcaattttagatataagccct ctgtcagatgtaggattggtgacaatcttttcccagtctgtaggctgtcg atttgtcctattgacaaagtctttgccttacagaagcttttcagttccac aaggtctcatttatcaattttttatcttagagcctaaatggctggtgctc tgttcaggaaggtgtctcctgtatcaatgagttcaaggttattcctcact ttctgctctatttgatttacactctctctttaatattcaatgtttttctt ttcttttttttgagaagagtttatttcatcttatattttacagtatatta tgaatggtagtcaggacaggaaatcaaacatgaacttggaggcaggcact gaagaagaggtcatgaagggatagaattactatcttgtgcagactgattt cttattccagctgttcagggatggcacttgcaatgtaaatcaccagtcaa gaaaatactcaatgatcttttgcctactagacaatctgatggagacattt tctcaagtgaagtttcctttttcagtttgactcctgttagactatatttt aattaaaaaaaaggaaaagaaagaaacaaaggaggaaggagagagagaga gagagagagagagagagagagagagagagagagagagagagag	gaattcctgttccgacttccttcagagatgaactacataagccaaatatg aaattataagctaaataaaccctttcctcttcaacttgcttttggtcata gggcttcatcacagcaatattatccctgcctaagacacaggaatggttca taacccttcctttgcctagataggaagtatatctgcactctgcctcccta cagatcatactccaacccacaaggtctaaagccttgctccacactgacag ggttcctggctttgagctgccttctagcctcggtgaatcccacaaccctc ttctgcagagctggagtgagggcagcagctatatcacacagagtgaggaa taaatgtgatttcccctatggaagaggcttgcatcatgctgctttagaat aagtggccaataaaggtcagacatctttatatcgttctgataatcggcat gctgggggctatgtctgtctttcactcatgatctcatatgttagtgtaca aaattaggaacatagctccctttgacccctagggtctactactactaggg gctgtctgtctttgctactctgtgtagacaggtactctgcaatgtgtgtc ctctctctcacacacacatgccacattaatgtcttcactcctgatggctt gcatctggggcatctgggcactgtgcctgctgggtgagggcagaggcagg agctggcatgtgacttccaagcctgaacacagtgatttgtgagtcaaggc aagttgtttctgtgggttgtcatgccgtttcagctgctccgtaaacacag cttgggccttggtggtgggtaaactgtgtgctcagacctgtattttaaga tcttacttggacagaggctggcagtcagaggaccaaagggtataatttta gattagtgtatccctagcttccaggtttgcctagggccacagcagcctct tctggaatccgatttgtgactggctgtactacaattgttaggcaactaga ttttgttcaggaaaggaaaatagtgtgtatggtgaagggtttctggagac aactagcaccccttgcattgttctgagctcatggtgcatgagcacacaca tacatcacacatacac
quality values	Open. Hide. 41 29 12 12 47 36 31 45 41 58 58 58 42 42 41 62 47 62 62 54 62 42 47 62 62 62 62 62 62 62 62 62 47 56 18 15 14 21 20 16 14 19 32 21 21 28 38 38 44 59 62 49 62 62 49 35 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 51 49 34 34 28 32 36 39 59 56 62 56 56 56 56 56 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 56 62 59 59 62 62 62 62 62 59 62 62 62 62 62 54 49 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 48 54 51 62 49 59 62 59 59 59 62 62 62 62 62 62 56 62 62 62 59 62 62 59 62 43 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 43 62 62 62 62 59 62 62 62 51 62 62 62 62 62 62 62 59 62 62 62 47 51 62 62 62 54 47 62 62 62 47 51 62 62 62 62 62 62 62 62 62 56 62 62 62 62 54 62 62 62 62 62 62 62 62 56 62 62 62 62 56 62 62 62 47 47 62 56 62 62 56 62 56 62 62 56 62 62 62 56 62 56 56 21 18 22 6 18 22 51 62 62 62 56 47 56 43 54 62 62 62 62 46 62 56 56 62 56 62 62 62 56 56 62 42 62 56 39 62 62 62 56 54 29 56 33 62 43 62 56 50 42 62 62 35 62 46 52 52 46 62 62 62 54 46 41 32 47 38 21 39 54 42 41 18 62 62 62 62 62 62 43 39 62 38 41 44 41 38 43 52 52 52 43 52 21 54 21 52 52 47 52 45 14 45 40 48 49 58 54 39 52 37 48 34 47 52 54 39 52 33 47 31 52 35 54 50 54 32 54 32 54 46 58 41 45 29 54 23 38 22 44 22 43 46 52 37 53 39 27 19 25 22 26 14 23 24 47 27 46 11 13 13	Open. Hide. 49 35 28 44 62 62 62 62 62 62 62 30 25 10 23 28 23 24 18 23 25 25 27 27 27 54 43 59 59 62 62 62 59 59 62 62 62 62 62 62 59 62 54 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 34 49 46 28 28 28 48 50 50 62 62 62 62 62 62 54 62 62 62 62 62 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 56 62 62 46 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 53 62 62 62 62 62 62 62 54 62 62 58 58 58 58 58 58 58 45 41 58 58 58 54 58 42 58 58 54 58 58 54 58 58 58 58 58 54 58 45 46 52 58 58 58 58 58 58 58 58 58 58 54 58 53 58 58 58 58 47 52 58 58 54 58 58 54 58 54 49 52 58 52 51 54 58 58 52 58 58 58 58 58 58 51 58 58 58 39 58 47 46 53 58 58 58 58 58 54 58 58 54 51 40 53 58 58 53 58 54 51 51 58 58 58 58 51 53 52 58 41 47 50 51 58 42 54 58 58 53 50 54 58 54 58 50 58 44 34 50 58 46 58 48 54 52 46 58 53 51 50 58 58 49 37 50 53 53 52 58 49 58 53 50 45 54 50 52 53 49 54 53 49 51 49 37 58 54 50 50 51 24 58 41 39 50 30 58 9 36 41 39 25 58 58 24 51 53 45 58 38 34 41 39 29 47 37 35 53 53 39 51 39 47 41 50 54 49 50 44 46 38 37 45 40 40 52 53 24 16 54 47 42 39 39 54 23 37 38 33 26 19 54 22 24 14 30 31 51 40 29 54 47 54 37 38 35 31 54 21 20 45 47 21 37 33 37 45 36 54 45 32 54 35 31 29 24 34 34 37 34 31 39 39 21 31 32 53 39 34 24 52 29 35 53 32 37 45 51 33 18 46 31 32 31 31 31 47 32 22 21 41 15 8 22 46 33 29 30 51 31 43 42 34 36 39 31 31 26 37 18 33 31 33 36 43 33 51 51 29 29 32 21 31 25 31 30 32 28 32 31 13 21 42 43 28 31 27 43 31 32 26 31 31 42 25 30 29 31 31 26 28 46 22 31 42 22 23 17 46 16 33 46 21 14 23 14 16 29 12 46 46 23 36 24 30 28 26 31 30 32 41 26 27 24 22 48 34 29 35 23 32 21 27 11 31 27 10 17 31 44 30 30 26 30 19 21 10 44 9 33 16 11 16 20 21 29 31 23 32 25 32 42 16 29 32 29 38 21 30 31 17 21 21 13 20 9 44 32 26 23 23 32 24 24 12 26 23 31 11 9 22 20 32 32 23 15 12 19 9 23 17 14 17 21 27 8 5 6 21 27 34 12 32 21 48 37 30 13 22 6 7 9 4 9 21 38 13 17 7 22 34 34 16 10 23 9 16 27 15 11 14 28 19 13 11 17 16 16 8 13 29 21 9 21 16 20 7 6 6 13 9 17 21 7 9 18 6 8 9 21 11 21 34 34 27 13 16 27 11 20 11 11 6 5 11 13 6 16 22 16 16 21 21 20 10 13 9 9 12 13 15 7 6 9 4 7 4 5 6 8 11 4 8 7 6 6 8 7 12 10 4 4 6 8 4 5 8 5 3

Alignment Information

BAC End 1

BAC End 2

seq1: chr8_88820705_88821446
seq2: B6Ng01-288E15.b_45_787

seq1  GAATTCTCTCTTTACCTTTGTACCCTTTTTTTTAATTGGGTTATTTGGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTTTACCTTTGTACCCTTTTTTTTAATTGGGTTATTTGGGT  50

seq1  TGTTGGTGTCTAACTTCTTGAGTTCTTTATCAATTTTAGATATAAGCCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGTGTCTAACTTCTTGAGTTCTTTATCAATTTTAGATATAAGCCCT  100

seq1  CTGTCAGATGTAGGATTGGTGACAATCTTTTCCCAGTCTGTAGGCTGTCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAGATGTAGGATTGGTGACAATCTTTTCCCAGTCTGTAGGCTGTCG  150

seq1  ATTTGTCCTATTGACAAAGTCTTTGCCTTACAGAAGCTTTTCAGTTCCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTCCTATTGACAAAGTCTTTGCCTTACAGAAGCTTTTCAGTTCCAC  200

seq1  AAGGTCTCATTTATCAATTTTTTATCTTAGAGCCTAAATGGCTGGTGCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCTCATTTATCAATTTTTTATCTTAGAGCCTAAATGGCTGGTGCTC  250

seq1  TGTTCAGGAAGGTGTCTCCTGTATCAATGAGTTCAAGGTTATTCCTCACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCAGGAAGGTGTCTCCTGTATCAATGAGTTCAAGGTTATTCCTCACT  300

seq1  TTCTGCTCTATTTGATTTACACTCTCTCTTTAATATTCAATGTTTTTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCTCTATTTGATTTACACTCTCTCTTTAATATTCAATGTTTTTCTT  350

seq1  TTCTTTTTTTTGAGAAGAGTTTATTTCATCTTATATTTTACAGTATATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTTTTGAGAAGAGTTTATTTCATCTTATATTTTACAGTATATTA  400

seq1  TGAATGGTAGTCAGGACAGGAAATCAAACATGAACTTGGAGGCAGGCACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGGTAGTCAGGACAGGAAATCAAACATGAACTTGGAGGCAGGCACT  450

seq1  GAAGAAGAGGTCATGAAGGGATAGAATTACTATCTTGTGCAGACTGATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGAGGTCATGAAGGGATAGAATTACTATCTTGTGCAGACTGATTT  500

seq1  CTTATTCCAGCTGTTCAGGGATGGCACTTGCAATGTAAATCACCAGTCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTCCAGCTGTTCAGGGATGGCACTTGCAATGTAAATCACCAGTCAA  550

seq1  GAAAATACTCAATGATCTTTTGCCTACTAGACAATCTGATGGAGACATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATACTCAATGATCTTTTGCCTACTAGACAATCTGATGGAGACATTT  600

seq1  TCTCAAGTGAAGTTTCCTTTTTCAGTTTGACTCCTGTTAGACTATA-TTT  649
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TCTCAAGTGAAGTTTCCTTTTTCAGTTTGACTCCTGTTAGACTATATTTT  650

seq1  AATTAAAAAAAAGGAAAAGAAAGAAACAAAGGAGGAAGGAGAGAGAGAGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAAAAAAAGGAAAAGAAAGAAACAAAGGAGGAAGGAGAGAGAGAGA  700

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  742
      |||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  743

seq1: chr8_88967467_88968570
seq2: B6Ng01-288E15.g_71_1186 (reverse)

seq1  GTGTGTGTGTG-----TGTGTGTGCTCATGCA-CATGAGCTCAGGAACAT  44
      |||| ||||||     |||||||||||||||| ||||||||||| |  ||
seq2  GTGTATGTGTGATGTATGTGTGTGCTCATGCACCATGAGCTCAGAACAAT  50

seq1  GCAAGGGGTGCTAGTTGGTCT-CAGAAACCC-TCA-CATACACACTATTT  91
      |||||||||||||||| |||| ||||||||| ||| ||||||||||||||
seq2  GCAAGGGGTGCTAGTT-GTCTCCAGAAACCCTTCACCATACACACTATTT  99

seq1  TCCTTTCCTTGAACAAAATCTAG-TGCCTAACAATTGTAGTACAGCCAGT  140
      |||||||| |||||||||||||| ||||||||||||||||||||||||||
seq2  TCCTTTCC-TGAACAAAATCTAGTTGCCTAACAATTGTAGTACAGCCAGT  148

seq1  CACAAATCGGATTCCAGAAGAGGCTGCTGTGG-CCTAGGCAAACCTGGAA  189
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CACAAATCGGATTCCAGAAGAGGCTGCTGTGGCCCTAGGCAAACCTGGAA  198

seq1  GCTAGGGATACACTAATCT-AAATTATACCC-TTGGTCCTCTGACTGCCA  237
      ||||||||||||||||||| ||||||||||| ||||||||||||||||||
seq2  GCTAGGGATACACTAATCTAAAATTATACCCTTTGGTCCTCTGACTGCCA  248

seq1  GCCTCTGTCCAAGTAAGATCTT-AAATACAGGTCTGAGCACACAGTTTAC  286
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GCCTCTGTCCAAGTAAGATCTTAAAATACAGGTCTGAGCACACAGTTTAC  298

seq1  CCACCACCAAGGCCCAAGCTGTGTTTACGGAGCAGCTGAAACGGCATGAC  336
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCACCAAGGCCCAAGCTGTGTTTACGGAGCAGCTGAAACGGCATGAC  348

seq1  AACCCACAGAAACAACTTGCCTTGACTCACAAATCACTGTGTTCAGGCTT  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCACAGAAACAACTTGCCTTGACTCACAAATCACTGTGTTCAGGCTT  398

seq1  GGAAGTCACATGCCAGCTCCTGCCTCTGCCCTCACCCAGCAGGCACAGTG  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTCACATGCCAGCTCCTGCCTCTGCCCTCACCCAGCAGGCACAGTG  448

seq1  CCCAGATGCCCCAGATGCAAGCCATCAGGAGTGAAGACATTAATGTGGCA  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGATGCCCCAGATGCAAGCCATCAGGAGTGAAGACATTAATGTGGCA  498

seq1  TGTGTGTGTGAGAGAGAGGACACACATTGCAGAGTACCTGTCTACACAGA  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGAGAGAGAGGACACACATTGCAGAGTACCTGTCTACACAGA  548

seq1  GTAGCAAAGACAGACAGCCCCTAGTAGTAGTAGACCCTAGGGGTCAAAGG  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCAAAGACAGACAGCCCCTAGTAGTAGTAGACCCTAGGGGTCAAAGG  598

seq1  GAGCTATGTTCCTAATTTTGTACACTAACATATGAGATCATGAGTGAAAG  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTATGTTCCTAATTTTGTACACTAACATATGAGATCATGAGTGAAAG  648

seq1  ACAGACATAGCCCCCAGCATGCCGATTATCAGAACGATATAAAGATGTCT  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACATAGCCCCCAGCATGCCGATTATCAGAACGATATAAAGATGTCT  698

seq1  GACCTTTATTGGCCACTTATTCTAAAGCAGCATGATGCAAGCCTCTTCCA  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTTATTGGCCACTTATTCTAAAGCAGCATGATGCAAGCCTCTTCCA  748

seq1  TAGGGGAAATCACATTTATTCCTCACTCTGTGTGATATAGCTGCTGCCCT  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGGAAATCACATTTATTCCTCACTCTGTGTGATATAGCTGCTGCCCT  798

seq1  CACTCCAGCTCTGCAGAAGAGGGTTGTGGGATTCACCGAGGCTAGAAGGC  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCAGCTCTGCAGAAGAGGGTTGTGGGATTCACCGAGGCTAGAAGGC  848

seq1  AGCTCAAAGCCAGGAACCCTGTCAGTGTGGAGCAAGGCTTTAGACCTTGT  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCAAAGCCAGGAACCCTGTCAGTGTGGAGCAAGGCTTTAGACCTTGT  898

seq1  GGGTTGGAGTATGATCTGTAGGGAGGCAGAGTGCAGATATACTTCCTATC  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTGGAGTATGATCTGTAGGGAGGCAGAGTGCAGATATACTTCCTATC  948

seq1  TAGGCAAAGGAAGGGTTATGAACCATTCCTGTGTCTTAGGCAGGGATAAT  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCAAAGGAAGGGTTATGAACCATTCCTGTGTCTTAGGCAGGGATAAT  998

seq1  ATTGCTGTGATGAAGCCCTATGACCAAAAGCAAGTTGAAGAGGAAAGGGT  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTGTGATGAAGCCCTATGACCAAAAGCAAGTTGAAGAGGAAAGGGT  1048

seq1  TTATTTAGCTTATAATTTCATATTTGGCTTATGTAGTTCATCTCTGAAGG  1086
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTAGCTTATAATTTCATATTTGGCTTATGTAGTTCATCTCTGAAGG  1098

seq1  AAGTCGGAACAGGAATTC  1104
      ||||||||||||||||||
seq2  AAGTCGGAACAGGAATTC  1116

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Alignment Information