BAC Information

Click to search

BAC

Clone NameB6Ng01-289K07
Chromosome8 (Build37)
Map Location 45,654,533 - 45,790,929
singlet/doubletdoublet
Overlap genenone
Upstream geneAdam26a, EG384813, Adam34, EG384814, LOC100039472, LOC547011, LOC622263
Downstream geneLOC100039508, Fat1, LOC100039673, Mtnr1a, EG622523, F11, Klkb1, Cyp4v3, BC035537, Tlr3, Sorbs2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-289K07.bB6Ng01-289K07.g
ACCGA086984GA086985
length1,0591,025
definitionB6Ng01-289K07.b B6Ng01-289K07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(45,789,857 - 45,790,929)(45,654,533 - 45,655,552)
sequence
gaattccatatacccagcatttccagggagaaaagaaggtcatgccaggg
tctctgcaagcttttcccaaatctgtttacactggaaactgacaatatcc
gatatctttccttccttcctgctgtgtgaggtactgaaaagcatcccctg
tagtttgagcatttaaacttaaactatttatactgcctcatgtatacaac
actcttccctaacaagtcccacggaagggcctgataccctctaaactgtt
ttctacactgccccctccttttcttaaatatcttataatttaacttaaaa
atcattccgcattgcttcaggaagtcttcttttaaacatgattatatact
ttgagaatggagatgctcttttttttttttttaaactaagttttagtatg
taatggttgttcctcttcttcctggttgcatatttttggtgacacatcca
tagcaacgtggctctatttataagcaaacagaaggagaaacatggacttt
ggctaacctgggtggacaaagcacaccctgaatgcaatcgtaattgtgcc
cacaatggggacgcgctccaaagtcgattggattttccacataatctgtt
ctgtgggaggaaattcatcagctgccacaacacatcatgatttgaactgg
atattttaattcataaaataaaatttaatttaataaaaaataagaatctg
agctcccattctgtttctagttgctgggtgctagactgtagcatttaaag
ttctccgaatggagtcctttcgagtggagtcccttctgaatccctgccag
gaaacatcgtatgtttaccaagaactaaagcaagggaacaattcacctgt
ttttctgagggagaaatattccacatgacttgacatggaaattccttact
cagttaagacattttatttaaagtcagcttttaaaaaatagtgaaaatta
gaataagttgagttctgtagacgatctgagtcactcactatcagtcacag
atttatactgggacttctgtgcttgatacgagaggtcaagatactatctt
tagcagtgg
gaattctattagtacaattgtctggaatccccagcctcctaagacccaca
gttatgacctttaactctacaattctacatttctactgaatggtcaattg
gttaaatagtgtgcacactgagggattgtagacaaaaggccgaagaaggg
aagctatttgagggtcagttaagaagaagtactcaattcctgaccagttg
tggatagccctggggttaattatatttgatgttaattctgttctccagta
agtggttgtgaacaaggagtgagtcagcactcaggtgatttcctgtaaac
ctgcttcccaccctaatttgtaaaataaaggagagctgatgattgggcag
ataaaagggaaggtggaaaggaaggtgaggagagagagaaggaggagaaa
atggagaagtagaggacgcagaggaggaggaagaagaagaaaagtggagc
agaagcacatggcctggagaaaccacaagttctaaggggtctcatagatg
tggaagacgttagtgtagcggtagatctgcccaatctaggcgcacagcgt
gtactcatattaatggagttgtgttttcattgctggggcatatttgggtg
gagatttacagcagcactgacccactttggttaaacctgtttaagatgct
gattagcaaaccactaggaaatagctcataaagaaggtttcaaggcggta
tggataaagagaaacagaaggcatgctgctctcttctgtccccgggagaa
gataacaatggcagaaatccacagacaagtcagaggtgaccccagatatc
tctgagcagggcctagtatctctttgtctgtctctctgtgtctctgccta
tctgggtgtgtctgtgtttctgttccccctcttccccctcgcctccctct
ctcactttctgtcttatcggtctctctctcccttttttcctctctccctc
cctctctctccctcctatttctccagctccttcctcctcctccttcctct
tctctgtgcctttcccccaaccttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_45789857_45790929
seq2: B6Ng01-289K07.b_46_1104 (reverse)

seq1  CCACTGGCTAAAGATAGTATCCTTTGACCTCTCCGTATCAAGCACAGGAA  50
      ||||| |||||||||||||||  ||||||||| ||||||||||||| |||
seq2  CCACT-GCTAAAGATAGTATC--TTGACCTCT-CGTATCAAGCACA-GAA  45

seq1  GTCCCCAGTATAAATCTGTTGAACTGATTAGTGAGTTGACTCAGATCGTC  100
      || ||||||||||||||||   ||||| ||||||| ||||||||||||||
seq2  GT-CCCAGTATAAATCTGT--GACTGA-TAGTGAG-TGACTCAGATCGTC  90

seq1  TACAGAACTCAACCTTATTCTAATTTTCACTTATTTTTTTAAAAAGCTGA  150
      |||||||||||| ||||||||||||||||| ||||||||  |||||||||
seq2  TACAGAACTCAA-CTTATTCTAATTTTCAC-TATTTTTT--AAAAGCTGA  136

seq1  CTTTAAATAAAATGTCTTAACTGAGTAAGGAATTTCCATGTCAAGTCATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAATAAAATGTCTTAACTGAGTAAGGAATTTCCATGTCAAGTCATG  186

seq1  TGGAATATTTCTCCCTCAGAAAAACAGGTGAATTGTTCCCTTGCTTTAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATATTTCTCCCTCAGAAAAACAGGTGAATTGTTCCCTTGCTTTAGT  236

seq1  TCTTGGTAAACATACGATGTTTCCTGGCAGGGATTCAGAAGGGACTCCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGTAAACATACGATGTTTCCTGGCAGGGATTCAGAAGGGACTCCAC  286

seq1  TCGAAAGGACTCCATTCGGAGAACTTTAAATGCTACAGTCTAGCACCCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAAAGGACTCCATTCGGAGAACTTTAAATGCTACAGTCTAGCACCCAG  336

seq1  CAACTAGAAACAGAATGGGAGCTCAGATTCTTATTTTTTATTAAATTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTAGAAACAGAATGGGAGCTCAGATTCTTATTTTTTATTAAATTAAA  386

seq1  TTTTATTTTATGAATTAAAATATCCAGTTCAAATCATGATGTGTTGTGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTTATGAATTAAAATATCCAGTTCAAATCATGATGTGTTGTGGC  436

seq1  AGCTGATGAATTTCCTCCCACAGAACAGATTATGTGGAAAATCCAATCGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGATGAATTTCCTCCCACAGAACAGATTATGTGGAAAATCCAATCGA  486

seq1  CTTTGGAGCGCGTCCCCATTGTGGGCACAATTACGATTGCATTCAGGGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGAGCGCGTCCCCATTGTGGGCACAATTACGATTGCATTCAGGGTG  536

seq1  TGCTTTGTCCACCCAGGTTAGCCAAAGTCCATGTTTCTCCTTCTGTTTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTGTCCACCCAGGTTAGCCAAAGTCCATGTTTCTCCTTCTGTTTGC  586

seq1  TTATAAATAGAGCCACGTTGCTATGGATGTGTCACCAAAAATATGCAACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAATAGAGCCACGTTGCTATGGATGTGTCACCAAAAATATGCAACC  636

seq1  AGGAAGAAGAGGAACAACCATTACATACTAAAACTTAGTTTAAAAAAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGAAGAGGAACAACCATTACATACTAAAACTTAGTTTAAAAAAAAA  686

seq1  AAAAAGAGCATCTCCATTCTCAAAGTATATAATCATGTTTAAAAGAAGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAGCATCTCCATTCTCAAAGTATATAATCATGTTTAAAAGAAGAC  736

seq1  TTCCTGAAGCAATGCGGAATGATTTTTAAGTTAAATTATAAGATATTTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGAAGCAATGCGGAATGATTTTTAAGTTAAATTATAAGATATTTAA  786

seq1  GAAAAGGAGGGGGCAGTGTAGAAAACAGTTTAGAGGGTATCAGGCCCTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGGAGGGGGCAGTGTAGAAAACAGTTTAGAGGGTATCAGGCCCTTC  836

seq1  CGTGGGACTTGTTAGGGAAGAGTGTTGTATACATGAGGCAGTATAAATAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGGACTTGTTAGGGAAGAGTGTTGTATACATGAGGCAGTATAAATAG  886

seq1  TTTAAGTTTAAATGCTCAAACTACAGGGGATGCTTTTCAGTACCTCACAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGTTTAAATGCTCAAACTACAGGGGATGCTTTTCAGTACCTCACAC  936

seq1  AGCAGGAAGGAAGGAAAGATATCGGATATTGTCAGTTTCCAGTGTAAACA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGAAGGAAGGAAAGATATCGGATATTGTCAGTTTCCAGTGTAAACA  986

seq1  GATTTGGGAAAAGCTTGCAGAGACCCTGGCATGACCTTCTTTTCTCCCTG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGGGAAAAGCTTGCAGAGACCCTGGCATGACCTTCTTTTCTCCCTG  1036

seq1  GAAATGCTGGGTATATGGAATTC  1073
      |||||||||||||||||||||||
seq2  GAAATGCTGGGTATATGGAATTC  1059

seq1: chr8_45654533_45655552
seq2: B6Ng01-289K07.g_70_1094

seq1  GAATTCTATTAGTACAATTGTCTGGAATCCCCAGCCTCCTAAGACCCACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATTAGTACAATTGTCTGGAATCCCCAGCCTCCTAAGACCCACA  50

seq1  GTTATGACCTTTAACTCTACAATTCTACATTTCTACTGAATGGTCAATTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGACCTTTAACTCTACAATTCTACATTTCTACTGAATGGTCAATTG  100

seq1  GTTAAATAGTGTGCACACTGAGGGATTGTAGACAAAAGGCCGAAGAAGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAATAGTGTGCACACTGAGGGATTGTAGACAAAAGGCCGAAGAAGGG  150

seq1  AAGCTATTTGAGGGTCAGTTAAGAAGAAGTACTCAATTCCTGACCAGTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTATTTGAGGGTCAGTTAAGAAGAAGTACTCAATTCCTGACCAGTTG  200

seq1  TGGATAGCCCTGGGGTTAATTATATTTGATGTTAATTCTGTTCTCCAGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATAGCCCTGGGGTTAATTATATTTGATGTTAATTCTGTTCTCCAGTA  250

seq1  AGTGGTTGTGAACAAGGAGTGAGTCAGCACTCAGGTGATTTCCTGTAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTTGTGAACAAGGAGTGAGTCAGCACTCAGGTGATTTCCTGTAAAC  300

seq1  CTGCTTCCCACCCTAATTTGTAAAATAAAGGAGAGCTGATGATTGGGCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTCCCACCCTAATTTGTAAAATAAAGGAGAGCTGATGATTGGGCAG  350

seq1  ATAAAAGGGAAGGTGGAAAGGAAGGTGAGGAGAGAGAGAAGGAGGAGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAGGGAAGGTGGAAAGGAAGGTGAGGAGAGAGAGAAGGAGGAGAAA  400

seq1  ATGGAGAAGTAGAGGACGCAGAGGAGGAGGAAGAAGAAGAAAAGTGGAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGAAGTAGAGGACGCAGAGGAGGAGGAAGAAGAAGAAAAGTGGAGC  450

seq1  AGAAGCACATGGCCTGGAGAAACCACAAGTTCTAAGGGGTCTCATAGATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCACATGGCCTGGAGAAACCACAAGTTCTAAGGGGTCTCATAGATG  500

seq1  TGGAAGACGTTAGTGTAGCGGTAGATCTGCCCAATCTAGGCGCACAGCGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGACGTTAGTGTAGCGGTAGATCTGCCCAATCTAGGCGCACAGCGT  550

seq1  GTACTCATATTAATGGAGTTGTGTTTTCATTGCTGGGGCATATTTGGGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTCATATTAATGGAGTTGTGTTTTCATTGCTGGGGCATATTTGGGTG  600

seq1  GAGATTTACAGCAGCACTGACCCACTTTGGTTAAACCTGTTTAAGATGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTTACAGCAGCACTGACCCACTTTGGTTAAACCTGTTTAAGATGCT  650

seq1  GATTAGCAAACCACTAGGAAATAGCTCATAAAGAAGG-TTCAAGGCGGTA  699
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GATTAGCAAACCACTAGGAAATAGCTCATAAAGAAGGTTTCAAGGCGGTA  700

seq1  TGGATAAAGAGAAACAGAAGGCATGCTGCTCTCTTCTGTCCCCGGGAGAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATAAAGAGAAACAGAAGGCATGCTGCTCTCTTCTGTCCCCGGGAGAA  750

seq1  GAAAACAATGGCAGAAATCCACAGACAAGTCAGAGGTGA-CCCAGATATC  798
      || |||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GATAACAATGGCAGAAATCCACAGACAAGTCAGAGGTGACCCCAGATATC  800

seq1  TCTGAGCAGGG-CTAGTATCTCTTTGTCTGTCTCTCTGTGTCTCTGTCTA  847
      ||||||||||| |||||||||||||||||||||||||||||||||| |||
seq2  TCTGAGCAGGGCCTAGTATCTCTTTGTCTGTCTCTCTGTGTCTCTGCCTA  850

seq1  TCTGTGTGTGTCTGTGTTTCTGTTTCCCCCTC-TCCCCCTC-CCTCCCTC  895
      |||| ||||||||||||||||| ||||||||| |||||||| ||||||||
seq2  TCTGGGTGTGTCTGTGTTTCTG-TTCCCCCTCTTCCCCCTCGCCTCCCTC  899

seq1  TCTCACTTTCTGTCTTTATCTGTCTCTCTCTCCCTTTTTCTCTCTCTCCC  945
      |||||||||||||| ||||| ||||||||||||||||||  |||||||||
seq2  TCTCACTTTCTGTC-TTATCGGTCTCTCTCTCCCTTTTTTCCTCTCTCCC  948

seq1  TCCCTCTCTCTCCTCTTCCTATTCCTCCTGCTCCTT-CTCCTCCTCCTTC  994
      ||||||||||||  | ||||||| |||| ||||||| |||||||||||||
seq2  TCCCTCTCTCTC--CCTCCTATTTCTCCAGCTCCTTCCTCCTCCTCCTTC  996

seq1  TTCTTCTCTGT-CCTT--CCCCCACCTTT  1020
       |||||||||| ||||  |||| ||||||
seq2  CTCTTCTCTGTGCCTTTCCCCCAACCTTT  1025