BAC Information

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BAC

Clone NameB6Ng01-289K23
Chromosome8 (Build37)
Map Location 68,701,805 - 68,702,955
singlet/doubletsinglet
Overlap geneMarch1
Upstream geneLOC100040949, LOC665405, Vaultrc-ps1, LOC100040967, LOC100040986
Downstream gene1810029B16Rik, Tktl2, Npy5r, Npy1r, BC053440, LOC665453
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-289K23.bB6Ng01-289K23.g
ACCGA087016GA087017
length1,1481,154
definitionB6Ng01-289K23.b B6Ng01-289K23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttatgactataaaaatatataaatgtaagtttagcctattttgt
tgaagaaatatatttgatttcatttaagtaagaggcaagaaaatattgtg
taatatagaggtttcagaaaaattattaccgcacgagttacattagtcag
agtttgtactatctttttcagagagaaaaattttcagactctacaaaaca
tcaagaatcaatcctaggtgaagttgcaaacattttaaatgaaaatatta
tccgagatgtgtcatcagggatagagtttggggaaatttttcttagtttc
tgtaaactccagggagtgggggaatttttcacatcaaccaataaacagat
gaaaactcaggagttcaaggcatgtctaaaatcaatgatttttcttctaa
atcttttaggtgatagctgtgctctgaacttaaacgctcatggggatgat
cataggtattaaaacttctcgtgtttgtaactagcaatgaaagaagacta
tgtgtggcttccacatcttttttcgttagtaattccaatggactttctta
ttccctcaccatggtacttacttggtaactggttatagaacacaccccaa
ctgctttgttgctttaatagtattttgtttcactccatagaaatgtaccc
ataagtttccaatttagtttatatttccacaagattcctaaattttctgg
ttgtagtcaaagaaaattaatgaatgtactgtcttgggaagactgcaagc
ataccattaggaggcatcctaaagccatagagattaaaggctagattcaa
caggtcctgaaaaaatgtcttccctagcatctacctacaagattttctaa
tacattctggattttgttttatttaggaagtattatatatctgaactgat
tatataatactatgaatatgactcaaataacttactgtgatttaattaat
ttttacatttaaaaatattatatagtggtttgcctacatgtatgtagtgt
attatgtgtgtgctctttgcttgaaactggagctgtagatggttatgagc
caacatatcagctctgaaatacctgatcctttgccagaaccatcaggcct
ctaattctggagccacctctctcccagcttaattactggtgatctttt
gaattcctgatatttccaagacttttatcatgaatgggtgttggatcttg
tcaaatgctttctccgcatctaaggagatgatcatgtggtttttatcttt
gagtttgtttatataatggattacgttgatggatttccgtatattaaacc
atcctgcatccctggaataaaacctacttggtcaggatggatgattgctt
taatgtgttcttggactcagttagtgagaattttattgagtatttttaca
ttgatattcataaggaaaattggtctgaagttctctatctttgttggttc
tttctattgtttaggtatcagagtaattgtggcttcatagaatgagttgg
gtagagttccctctacttctattttgtgaaatagtttgtgctgaactgga
attggatcttctttgaaggtctggtagaactctacactaaacccatctgg
tcctggcctttttttttttggctgggagactattaatgactgcttctatt
tctttaggggatatgggactgtttagatcgttaacttgatcctaatttaa
ctttggtacctggtatctgcctagaaatttgtccatttcgtccatgtttt
ccagttctgttgagtatagccttttgtagaaggatctgatggtgttttgg
atttcttcaggatctgttgttatgtctcccttttcagttctgattttgtt
aattaggatgttgtccctgtgccctctagtgagtacagctaagggtttat
ctatcttgttgattttctcaaagaaccaactcctcgtttggttaattctt
tgaatagttctttttttacacttggttgatttcacccctgagttgattat
ttcctgccgtctactcctcttgggtagatttcttccttttttctagagct
tttagatgtgtgtcaagctgctagtgtgtgctctctcccgtttcttctgg
agcactcagagtatgagtttccctctagaaatgctttcattgtgtcccat
agttggtatgttgtgcctcatttccataactctagaaggccttagttcct
tccttatcatcttgacccaggtatcattggaaagcgtgtaatcatttcac
gtgatgtgcattctatagttgctatgaatcagcttagcatgtgtggtctg
tact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_68701805_68702955
seq2: B6Ng01-289K23.b_48_1195 (reverse)

seq1  AAAAGATCA-CAGTAAATAAAGCTG---GAGAAGTGGCT-CAGATTTAGA  45
      ||||||||| |||| ||| ||||||   |||| |||||| |||| |||||
seq2  AAAAGATCACCAGT-AATTAAGCTGGGAGAGAGGTGGCTCCAGAATTAGA  49

seq1  GGGCTTGATGG-TCTTGCAAAGGATCCAGGTTAATTTCCAGAGCTGATAT  94
       ||| |||||| ||| ||||||||| |||||  |||| ||||||||||||
seq2  -GGCCTGATGGTTCTGGCAAAGGAT-CAGGT--ATTT-CAGAGCTGATAT  94

seq1  GTTGGCTCATAACCATCTACAGCTCAGTTTTCAAGCAAAGAGCACACACA  144
      |||||||||||||||||||||||||   ||||||||||||||||||||||
seq2  GTTGGCTCATAACCATCTACAGCTCCAGTTTCAAGCAAAGAGCACACACA  144

seq1  TAATACACTTACATACATGTAGGCAAACCACTTATATAATATTTTTTAAA  194
      |||||||| |||||||||||||||||||||| ||||||||| ||||||||
seq2  TAATACAC-TACATACATGTAGGCAAACCAC-TATATAATA-TTTTTAAA  191

seq1  TGTAAAAATTAATTAAATCACAGTAAGTTATTTGAGTCATATTCATAGTA  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAAATTAATTAAATCACAGTAAGTTATTTGAGTCATATTCATAGTA  241

seq1  TTATATAATCAGTTCAGATATATAATACTTCCTAAATAAAACAAAATCCA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATAATCAGTTCAGATATATAATACTTCCTAAATAAAACAAAATCCA  291

seq1  GAATGTATTAGAAAATCTTGTAGGTAGATGCTAGGGAAGACATTTTTTCA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTATTAGAAAATCTTGTAGGTAGATGCTAGGGAAGACATTTTTTCA  341

seq1  GGACCTGTTGAATCTAGCCTTTAATCTCTATGGCTTTAGGATGCCTCCTA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCTGTTGAATCTAGCCTTTAATCTCTATGGCTTTAGGATGCCTCCTA  391

seq1  ATGGTATGCTTGCAGTCTTCCCAAGACAGTACATTCATTAATTTTCTTTG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTATGCTTGCAGTCTTCCCAAGACAGTACATTCATTAATTTTCTTTG  441

seq1  ACTACAACCAGAAAATTTAGGAATCTTGTGGAAATATAAACTAAATTGGA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACAACCAGAAAATTTAGGAATCTTGTGGAAATATAAACTAAATTGGA  491

seq1  AACTTATGGGTACATTTCTATGGAGTGAAACAAAATACTATTAAAGCAAC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTATGGGTACATTTCTATGGAGTGAAACAAAATACTATTAAAGCAAC  541

seq1  AAAGCAGTTGGGGTGTGTTCTATAACCAGTTACCAAGTAAGTACCATGGT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAGTTGGGGTGTGTTCTATAACCAGTTACCAAGTAAGTACCATGGT  591

seq1  GAGGGAATAAGAAAGTCCATTGGAATTACTAACGAAAAAAGATGTGGAAG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAATAAGAAAGTCCATTGGAATTACTAACGAAAAAAGATGTGGAAG  641

seq1  CCACACATAGTCTTCTTTCATTGCTAGTTACAAACACGAGAAGTTTTAAT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACATAGTCTTCTTTCATTGCTAGTTACAAACACGAGAAGTTTTAAT  691

seq1  ACCTATGATCATCCCCATGAGCGTTTAAGTTCAGAGCACAGCTATCACCT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTATGATCATCCCCATGAGCGTTTAAGTTCAGAGCACAGCTATCACCT  741

seq1  AAAAGATTTAGAAGAAAAATCATTGATTTTAGACATGCCTTGAACTCCTG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGATTTAGAAGAAAAATCATTGATTTTAGACATGCCTTGAACTCCTG  791

seq1  AGTTTTCATCTGTTTATTGGTTGATGTGAAAAATTCCCCCACTCCCTGGA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTCATCTGTTTATTGGTTGATGTGAAAAATTCCCCCACTCCCTGGA  841

seq1  GTTTACAGAAACTAAGAAAAATTTCCCCAAACTCTATCCCTGATGACACA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACAGAAACTAAGAAAAATTTCCCCAAACTCTATCCCTGATGACACA  891

seq1  TCTCGGATAATATTTTCATTTAAAATGTTTGCAACTTCACCTAGGATTGA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCGGATAATATTTTCATTTAAAATGTTTGCAACTTCACCTAGGATTGA  941

seq1  TTCTTGATGTTTTGTAGAGTCTGAAAATTTTTCTCTCTGAAAAAGATAGT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGATGTTTTGTAGAGTCTGAAAATTTTTCTCTCTGAAAAAGATAGT  991

seq1  ACAAACTCTGACTAATGTAACTCGTGCGGTAATAATTTTTCTGAAACCTC  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACTCTGACTAATGTAACTCGTGCGGTAATAATTTTTCTGAAACCTC  1041

seq1  TATATTACACAATATTTTCTTGCCTCTTACTTAAATGAAATCAAATATAT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTACACAATATTTTCTTGCCTCTTACTTAAATGAAATCAAATATAT  1091

seq1  TTCTTCAACAAAATAGGCTAAACTTACATTTATATATTTTTATAGTCATA  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCAACAAAATAGGCTAAACTTACATTTATATATTTTTATAGTCATA  1141

seq1  AGAATTC  1151
      |||||||
seq2  AGAATTC  1148