BAC Information

Click to search

BAC

Clone NameB6Ng01-291C09
Chromosome8 (Build37)
Map Location 5,465,293 - 5,466,101
singlet/doubletsinglet
Overlap genenone
Upstream genePpia-ps8_36.1, Lass4, Vmn2r-ps89, EG633533, BC003267, LOC665021, EG623133, EG665044, EG623223, LOC100040234, Shcbp1, EG622568, LOC669393, EG631359, LOC100039687, LOC436026, Slc10a2, LOC434275
Downstream geneLOC623409, LOC669429, LOC100040360
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-291C09.bB6Ng01-291C09.g
ACCGA088113GA088114
length8091,050
definitionB6Ng01-291C09.b B6Ng01-291C09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaactttttgagttctttgtatatattggatattatctctctat
tggatctaaggttgctaaagatcttttcccaatctgttgcttgccatttt
gtcctattgacagtgtcccttgccttacagaagctttacaattttccttg
gttaaagtgaatgataaaaacatggcataatttcggtggccaaagcatta
acatggcacaaaaaggggattctttgggacattctcacaattatgtaatt
gttcctgtcagagaaaaggagggaaaatataggatggagtttctgactca
tgagaagttacagacacagataattcataagggaatagagccacagtcaa
atcgacaggtctttatttcaaattccaagatcaaatgtagtaaaataatg
gaacaaaggtgttgaaaaactcaataagagtaataaaggttttgaatcct
gaagaaaggaagctactatcaccataggtaaagtaggtcatcttcaattt
ctttttacatagaataagattgttaaagggcttttattttattttttgac
tatcaatggaaagatttagagcacatgctttcaagggtctgcaaagtaac
ttttgaaaaggaattagaattggaatacagagtttcaggtattgaaggct
tagttttaggatgaggctgttgcttaagaaagttctaggtactttatgaa
tcagtacttgcctggatgaaataaatggctctactcattcctgtcctctc
tctttctccctctctgtctctctctctctccatatgtgtgtgtgtgtgtg
tgtgtgtat

gaattctttggtttctccatctatggtaattgagagtttggctggcattt
gtgttctcttagtgtctgtataacatctgtccaggctcttctggctttca
tagtctctggtgaaaagtcttgtataattctgataggcctgtctttatat
gttacttgacctttctcccttactgcttttaatattctctctttatttag
tgcatttgttgttctgattattatgtgttgggaggaatttcttttctggg
ccagtgtatttggagttctgtaggcttcttttatgttcatgggtgtctct
ttctttaggtttgggaagtgttcttctataattttgttgaagatatttgc
tggtccattgagttgaaaatcttcattctcatccactcctattatccgta
ggtttggtcttctcattgtgtcctggatttcctggatgttttgagttagg
atcgttttgtgttttccattttctttgattgttgtgcagatgttctctat
ggaatcttctgcacctgagattctctcttccatctcttgcattctgttgc
tgatgcccgcatttatggttccagatttctttcatagggtttctatctcc
agcgttgcctcactttgggttttctttattgtgtctacttccctttttat
gtcttagatggttttattcaattccatcacctgtttagtcgtgttttcct
gcaattctttaaggaacttttgtgtttcctatttaaggtcttctacctgt
ttagctgtgttctgctgtatttctttaagtgagttattaaagtccttctt
gatgtcctctagcatcatcatgatatatgcttttaaatccaggtcttgct
tttcgggtgtgttggggtgcccaggactaggtgggggtgggagtgctgcg
ttctgatgatggtgagtggtcttgatttctggtagtaggattcttaacat
ttgcctttcgccatctggtatctctgaagctagttgttatattgcttctg
gttaaacctgttctcaaggtgatctcgttagcctttatcaatcgaacctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_5465293_5466101
seq2: B6Ng01-291C09.b_45_853

seq1  GAATTCTAACTTTTTGAGTTCTTTGTATATATTGGATATTATCTCTCTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAACTTTTTGAGTTCTTTGTATATATTGGATATTATCTCTCTAT  50

seq1  TGGATCTAAGGTTGCTAAAGATCTTTTCCCAATCTGTTGCTTGCCATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCTAAGGTTGCTAAAGATCTTTTCCCAATCTGTTGCTTGCCATTTT  100

seq1  GTCCTATTGACAGTGTCCCTTGCCTTACAGAAGCTTTACAATTTTCCTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTATTGACAGTGTCCCTTGCCTTACAGAAGCTTTACAATTTTCCTTG  150

seq1  GTTAAAGTGAATGATAAAAACATGGCATAATTTCGGTGGCCAAAGCATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAAGTGAATGATAAAAACATGGCATAATTTCGGTGGCCAAAGCATTA  200

seq1  ACATGGCACAAAAAGGGGATTCTTTGGGACATTCTCACAATTATGTAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGCACAAAAAGGGGATTCTTTGGGACATTCTCACAATTATGTAATT  250

seq1  GTTCCTGTCAGAGAAAAGGAGGGAAAATATAGGATGGAGTTTCTGACTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTGTCAGAGAAAAGGAGGGAAAATATAGGATGGAGTTTCTGACTCA  300

seq1  TGAGAAGTTACAGACACAGATAATTCATAAGGGAATAGAGCCACAGTCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAGTTACAGACACAGATAATTCATAAGGGAATAGAGCCACAGTCAA  350

seq1  ATCGACAGGTCTTTATTTCAAATTCCAAGATCAAATGTAGTAAAATAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGACAGGTCTTTATTTCAAATTCCAAGATCAAATGTAGTAAAATAATG  400

seq1  GAACAAAGGTGTTGAAAAACTCAATAAGAGTAATAAAGGTTTTGAATCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAAAGGTGTTGAAAAACTCAATAAGAGTAATAAAGGTTTTGAATCCT  450

seq1  GAAGAAAGGAAGCTACTATCACCATAGGTAAAGTAGGTCATCTTCAATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAGGAAGCTACTATCACCATAGGTAAAGTAGGTCATCTTCAATTT  500

seq1  CTTTTTACATAGAATAAGATTGTTAAAGGGCTTTTATTTTATTTTTTGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTACATAGAATAAGATTGTTAAAGGGCTTTTATTTTATTTTTTGAC  550

seq1  TATCAATGGAAAGATTTAGAGCACATGCTTTCAAGGGTCTGCAAAGTAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAATGGAAAGATTTAGAGCACATGCTTTCAAGGGTCTGCAAAGTAAC  600

seq1  TTTTGAAAAGGAATTAGAATTGGAATACAGAGTTTCAGGTATTGAAGGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAAAAGGAATTAGAATTGGAATACAGAGTTTCAGGTATTGAAGGCT  650

seq1  TAGTTTTAGGATGAGGCTGTTGCTTAAGAAAGTTCTAGGTACTTTATGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTTAGGATGAGGCTGTTGCTTAAGAAAGTTCTAGGTACTTTATGAA  700

seq1  TCAGTACTTGCCTGGATGAAATAAATGGCTCTACTCATTCCTGTCCTCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTACTTGCCTGGATGAAATAAATGGCTCTACTCATTCCTGTCCTCTC  750

seq1  TCTTTCTCCCTCTCTGTCTCTCTCTCTCTCCATATGTGTGTGTGTGTGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTCCCTCTCTGTCTCTCTCTCTCTCCATATGTGTGTGTGTGTGTG  800

seq1  TGTGTGTAT  809
      |||||||||
seq2  TGTGTGTAT  809


| Home | SequenceCutter | Blast | Download |