BAC Information

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BAC

Clone NameB6Ng01-291M15
Chromosome8 (Build37)
Map Location 109,930,257 - 109,931,320
singlet/doubletsinglet
Overlap genenone
Upstream geneZfp90, 6030452D12Rik, Cdh3, LOC100042734, Cdh1, Tmco7, Has3, 5830457O10Rik, Cirh1a, EG234703, Sntb2, Vps4a, Cog8, Nip7, Tmed6, Terf2, EG667847, Cyb5b, LOC100042791, Nfat5, Nqo1
Downstream geneNob1, Wwp2, LOC100042812, Psmd7, LOC100041744, LOC668038
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-291M15.bB6Ng01-291M15.g
ACCGA088587GA088588
length1,1981,086
definitionB6Ng01-291M15.b B6Ng01-291M15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccagccaaaggaattaaaggtgtacactaagggctgagccacacc
acaccagaaacagatattttcagtaaataacacaatcttgggattcacta
tgtgatcaaatatgtgacaacaattgtgggtggtacattcctaggctggt
tgtcctgggctctagaagaaagcagactgagcaagccatgaggagcaagc
cagtaagcagcattctttgatggcctctgcatcagctcctgcctctagat
tcctgccctgtttgagttcctgtcctgacttccttcggtgatagactatg
gtgtggaggtgtaagccaaattaaccctttcctccccaagtagtttagtc
atggtttttcatcacagcagtaggaaccctaagataggggctgtgcaaag
tttctgtggtgctgatggtcaaacccaggttcttgtgcgtgctaagcatg
tgcccactgactgagccccatctctagccccctccgttccatgctagatc
caccactcagtgaaggcacacacatcacaattagcgatggcacctttttt
aaactttttcttcttcttttttttttttttttacatgtttaattatgtga
gtctgtgggtatgtgcacatgagttcggtgcccaccgttcctctggagct
ggagttgtgagcaggcagtttcgagctgtttgaggtgggtgccaccttga
gaaactgcactcgggtcctctggaagaacagcgtgtactctaagttgctg
agccatctctctcagctccttaacattttttttcatacattaatgtaatg
tgtgttcacacatgcacacccacgatacatttgcaaagatcacggacaac
ttgtgggagtcagtcatcttctttgagcatatgggtcctgaggatcgaac
tcagcagtcagctgtggcagcaagcacctttatagtctggaccatcttgt
ggcccaccaatagccgtggtgtttattgccgtgtcagttctgggctgtaa
atcatctctgtattacatcctgagttctgatttagatgattctgtgttct
taaggcatacaacttagggatgaggaaaatcaagaaaaaattttgcatta
gctagcgctgctctacagctgaactgcgaccacctactccgaatccacct
gatgaacgttcacatcgatctgctagtaccctctgggtttaagggagt
gaattccaattggtccatcagtctgcagacaggtttcttccaggagtttt
ttgttttttgttttgttttctgttcctagccagatagcttcctttcagga
attgttttttcttgagttggggtttctctgtgtagccctggctgtcctgg
aaccagatatgtagactaggctggtcttgaactcacagagacatgcctac
ctctttctctctagccccaatctgctttcttatagaatctagcccaggga
tggcacctcccacaatggtctgggtccaaccccatcaatcactaattcag
gaaatgccctacagttggatcatacagaggagcagttctcagttgcgggt
ccctcttcagatgactctagcttgtgtcaagttgacataagactagccag
gacatcggagacatggactgacactgtactgtctttacgtttctgtcatg
tttctgtttgtggtcattacatggctatagaattcccatggtctggtatg
aaacagaccttcgttccagggctctgtatgtggtggtcattgcttgtggg
ctaaatggtgtgctcagggcccctcccccacactgagggaaaaagcagag
ccaggagctgtgatgttgttcatgttgtcactattagaaataaaaagtcg
ggtagttgaatcccaggagtcctcctcctcctggtggaagctctaacagc
ctcgttagtcactgctatttacgcgtgtccagatgtggtccagctcttca
gcacaagaagtccccaaagtcactagtgtttccctgagcagtggtgatgg
acctagcacactgctcacagccattctcaggtctgtctggggacttgggt
atcttgtttgtcctcaggggttctggggagtgccagccataccccttgcg
gggaagcaaggccccagtctcaggaagagagactttttttactctaagtc
ctatcttctctactgtctttctcccctatcttccacccacctacttacag
cgtaggacacaaatggctcttatttgcattcttctgtcttggttggaagt
ttggcttgttctctgtaatgccctgaatcaggccat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_109930257_109931320
seq2: B6Ng01-291M15.g_70_1155

seq1  GAATTCCAATTGGTCCATCAGTCTGCAGACAGGTTTCTTCCAGGAGTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAATTGGTCCATCAGTCTGCAGACAGGTTTCTTCCAGGAGTTTT  50

seq1  TTGTTTTTTGTTTTGTTTTCTGTTCCTAGCCAGATAGCTTCCTTTCAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTTTGTTTTGTTTTCTGTTCCTAGCCAGATAGCTTCCTTTCAGGA  100

seq1  ATTGTTTTTTCTTGAGTTGGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTTTTCTTGAGTTGGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGG  150

seq1  AACCAGATATGTAGACTAGGCTGGTCTTGAACTCACAGAGACATGCCTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGATATGTAGACTAGGCTGGTCTTGAACTCACAGAGACATGCCTAC  200

seq1  CTCTTTCTCTCTAGCCCCAATCTGCTTTCTTATAGAATCTAGCCCAGGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTCTCTCTAGCCCCAATCTGCTTTCTTATAGAATCTAGCCCAGGGA  250

seq1  TGGCACCTCCCACAATGGTCTGGGTCCAACCCCATCAATCACTAATTCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACCTCCCACAATGGTCTGGGTCCAACCCCATCAATCACTAATTCAG  300

seq1  GAAATGCCCTACAGTTGGATCATACAGAGGAGCAGTTCTCAGTTGCGGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGCCCTACAGTTGGATCATACAGAGGAGCAGTTCTCAGTTGCGGGT  350

seq1  CCCTCTTCAGATGACTCTAGCTTGTGTCAAGTTGACATAAGACTAGCCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTTCAGATGACTCTAGCTTGTGTCAAGTTGACATAAGACTAGCCAG  400

seq1  GACATCGGAGACATGGACTGACACTGTACTGTCTTTACGTTTCTGTCATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATCGGAGACATGGACTGACACTGTACTGTCTTTACGTTTCTGTCATG  450

seq1  TTTCTGTTTGTGGTCATTACATGGCTATAGAATTCCCATGGTCTGGTATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTTTGTGGTCATTACATGGCTATAGAATTCCCATGGTCTGGTATG  500

seq1  AAACAGACCTTCGTTCCAGGGCTCTGTATGTGGTGGTCATTGCTTGTGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGACCTTCGTTCCAGGGCTCTGTATGTGGTGGTCATTGCTTGTGGG  550

seq1  CTAAATGGTGTGCTCAGGGCCCCTCCCCCACACTGAGGGAAAAAGCAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATGGTGTGCTCAGGGCCCCTCCCCCACACTGAGGGAAAAAGCAGAG  600

seq1  CCAGGAGCTGTGATGTTGTTCATGTTGTCACTATTAGAAATAAAAAGTCG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAGCTGTGATGTTGTTCATGTTGTCACTATTAGAAATAAAAAGTCG  650

seq1  GGTAGTTGAATCCCAGGAGTCCTCCTCCTCCTGGTGGAAGCTCTAACAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGTTGAATCCCAGGAGTCCTCCTCCTCCTGGTGGAAGCTCTAACAGC  700

seq1  CTCGTTAGTCACTGCTA-TTACGCGTGTCCAGATGTGGTCCAGCTCTTCA  749
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CTCGTTAGTCACTGCTATTTACGCGTGTCCAGATGTGGTCCAGCTCTTCA  750

seq1  GCACAAGAAGTCCCCAAAGTCACTAGTGTTTCCCTGAGCAGTGGTGATGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAAGAAGTCCCCAAAGTCACTAGTGTTTCCCTGAGCAGTGGTGATGG  800

seq1  ACCTAGCACACTGCTCACAGCCATTCTCAGGTCTGTCTGGGGACTTGGGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGCACACTGCTCACAGCCATTCTCAGGTCTGTCTGGGGACTTGGGT  850

seq1  ATCT--GTTGTCCTCAGGGGTTCCTGGGAGTGCCAGCCATA-CCCTTGCG  896
      ||||   ||||||||||||||||  |||||||||||||||| ||||||||
seq2  ATCTTGTTTGTCCTCAGGGGTTCTGGGGAGTGCCAGCCATACCCCTTGCG  900

seq1  GGGAAGCAAGGCCCCAGTCTCAGG-AGAGAGACATTTTTTACTCTAAGTC  945
      |||||||||||||||||||||||| |||||||| ||||||||||||||||
seq2  GGGAAGCAAGGCCCCAGTCTCAGGAAGAGAGACTTTTTTTACTCTAAGTC  950

seq1  CTATCTTCTCTACTGTC-TTCT-CCCTATC-TCCA-CCACC-AC-TACAG  989
      ||||||||||||||||| |||| ||||||| |||| ||||| || |||||
seq2  CTATCTTCTCTACTGTCTTTCTCCCCTATCTTCCACCCACCTACTTACAG  1000

seq1  CGTAGGACAC-AACGGCTCT--ATTGCATTC-TCTGTCTT-GTTGGAAGT  1034
      |||||||||| || ||||||   |||||||| |||||||| |||||||||
seq2  CGTAGGACACAAATGGCTCTTATTTGCATTCTTCTGTCTTGGTTGGAAGT  1050

seq1  TTG--CTGTTCTGT---ATG-CCTGAATCAGGGCAT  1064
      |||   |||||| |   ||| ||||||||||| |||
seq2  TTGGCTTGTTCTCTGTAATGCCCTGAATCAGGCCAT  1086