BAC Information

Click to search

BAC

Clone NameB6Ng01-294E13
Chromosome8 (Build37)
Map Location 32,080,128 - 32,208,897
singlet/doubletdoublet
Overlap geneLOC547008, Dusp26
Upstream geneEG628189
Downstream geneRnf122, BC019943, Rbm13, Fut10, LOC666330, LOC666568, 7420700N18Rik, LOC100041329, EG330731, LOC100041340, Nrg1, 2010007E15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-294E13.bB6Ng01-294E13.g
ACCGA090453GA090454
length711481
definitionB6Ng01-294E13.b B6Ng01-294E13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,208,187 - 32,208,897)(32,080,128 - 32,080,614)
sequence
gaattctgcttcccataaatatggaggaatgcagtattggccagcctgta
gggtaagcggaaatacgacaaatgcagatggttgggaacaaatagctctt
ggtctgaaaggaccgggtcagaagagaaccactcgaactaggttcaaacc
agagaactccctctctgtctcaagagatggggaaagttttgtaaaaggtg
gagctagagcccgtggccatttagatgcgaagctgagtcttacctatgaa
atgaccacgatcgtcccatggaagaagccagaaccactgtctggaaacga
gactaagaggtggtgaatcccgttggctgaaatgttcaagcaagggcttg
gtgctgcacagaggtgagacagatgtctgtgcctcttggacagtcgagct
gcaatctgtgaaggagcctcccagctttagatgaagtaaaacacagaaat
agagctaggacattaacgaataacaatctagaatccaccctggaagataa
tcctgaaactcgttctttatccatatattctctagaagccacactttgtg
agagtcacttctagcttctacgctctggagtagttatacacttttataca
cttcgtatataagtgtcttgaaaacttttagtgcatacttttgtgagagt
ctgtgtgtgtgtgtgtaagagagagagaaaatgtgtgtgtatgtgtgtgt
gtgtgtgtgtg

ttgggcctaaatggagacactgagtgttgtgttattttttgcttgtctat
acttcgaaactatatataaagaacgtgttttattttaaatacaataagtt
ttagactataaaatgtacaaaagtgtcaactcctcaaacaaatctgtgaa
ggatttttaatagcttttcctatatttgtcagtaaccaacagattttatc
agatggaacaactcacagttttcatgttctattagcatggattagtagtt
atgcatagtaatgagcttgttatgacattttcatacatttatataatgtg
ttttgagtgtattcaatcaccattgccatctctggtccttagcactccac
tgatctctcacttcccaagcagctcctcctttgcctttgtcccttctctt
atttttgttggtattgtaaactttatgtgcccagtacagggaaatgccag
ggccaagaagtgggagtgggtgggtagggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_32208187_32208897
seq2: B6Ng01-294E13.b_45_755 (reverse)

seq1  CACACACACACACACACACATACACACACATTTTCTCTCTCTCTTACACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACATACACACACATTTTCTCTCTCTCTTACACA  50

seq1  CACACACACAGACTCTCACAAAAGTATGCACTAAAAGTTTTCAAGACACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACAGACTCTCACAAAAGTATGCACTAAAAGTTTTCAAGACACT  100

seq1  TATATACGAAGTGTATAAAAGTGTATAACTACTCCAGAGCGTAGAAGCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATACGAAGTGTATAAAAGTGTATAACTACTCCAGAGCGTAGAAGCTA  150

seq1  GAAGTGACTCTCACAAAGTGTGGCTTCTAGAGAATATATGGATAAAGAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGACTCTCACAAAGTGTGGCTTCTAGAGAATATATGGATAAAGAAC  200

seq1  GAGTTTCAGGATTATCTTCCAGGGTGGATTCTAGATTGTTATTCGTTAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTCAGGATTATCTTCCAGGGTGGATTCTAGATTGTTATTCGTTAAT  250

seq1  GTCCTAGCTCTATTTCTGTGTTTTACTTCATCTAAAGCTGGGAGGCTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTAGCTCTATTTCTGTGTTTTACTTCATCTAAAGCTGGGAGGCTCCT  300

seq1  TCACAGATTGCAGCTCGACTGTCCAAGAGGCACAGACATCTGTCTCACCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGATTGCAGCTCGACTGTCCAAGAGGCACAGACATCTGTCTCACCT  350

seq1  CTGTGCAGCACCAAGCCCTTGCTTGAACATTTCAGCCAACGGGATTCACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCAGCACCAAGCCCTTGCTTGAACATTTCAGCCAACGGGATTCACC  400

seq1  ACCTCTTAGTCTCGTTTCCAGACAGTGGTTCTGGCTTCTTCCATGGGACG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTTAGTCTCGTTTCCAGACAGTGGTTCTGGCTTCTTCCATGGGACG  450

seq1  ATCGTGGTCATTTCATAGGTAAGACTCAGCTTCGCATCTAAATGGCCACG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGTGGTCATTTCATAGGTAAGACTCAGCTTCGCATCTAAATGGCCACG  500

seq1  GGCTCTAGCTCCACCTTTTACAAAACTTTCCCCATCTCTTGAGACAGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTAGCTCCACCTTTTACAAAACTTTCCCCATCTCTTGAGACAGAGA  550

seq1  GGGAGTTCTCTGGTTTGAACCTAGTTCGAGTGGTTCTCTTCTGACCCGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTTCTCTGGTTTGAACCTAGTTCGAGTGGTTCTCTTCTGACCCGGT  600

seq1  CCTTTCAGACCAAGAGCTATTTGTTCCCAACCATCTGCATTTGTCGTATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCAGACCAAGAGCTATTTGTTCCCAACCATCTGCATTTGTCGTATT  650

seq1  TCCGCTTACCCTACAGGCTGGCCAATACTGCATTCCTCCATATTTATGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGCTTACCCTACAGGCTGGCCAATACTGCATTCCTCCATATTTATGGG  700

seq1  AAGCAGAATTC  711
      |||||||||||
seq2  AAGCAGAATTC  711


seq1: chr8_32080128_32080614
seq2: B6Ng01-294E13.g_67_553

seq1  GAATTCTTGGGCCTAAATGGAGACACTGAGTGTTGTGTTATTTTTTGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGGGCCTAAATGGAGACACTGAGTGTTGTGTTATTTTTTGCTT  50

seq1  GTCTATACTTCGAAACTATATATAAAGAACGTGTTTTATTTTAAATACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATACTTCGAAACTATATATAAAGAACGTGTTTTATTTTAAATACAA  100

seq1  TAAGTTTTAGACTATAAAATGTACAAAAGTGTCAACTCCTCAAACAAATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTTTAGACTATAAAATGTACAAAAGTGTCAACTCCTCAAACAAATC  150

seq1  TGTGAAGGATTTTTAATAGCTTTTCCTATATTTGTCAGTAACCAACAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAGGATTTTTAATAGCTTTTCCTATATTTGTCAGTAACCAACAGAT  200

seq1  TTTATCAGATGGAACAACTCACAGTTTTCATGTTCTATTAGCATGGATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCAGATGGAACAACTCACAGTTTTCATGTTCTATTAGCATGGATTA  250

seq1  GTAGTTATGCATAGTAATGAGCTTGTTATGACATTTTCATACATTTATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTATGCATAGTAATGAGCTTGTTATGACATTTTCATACATTTATAT  300

seq1  AATGTGTTTTGAGTGTATTCAATCACCATTGCCATCTCTGGTCCTTAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGTTTTGAGTGTATTCAATCACCATTGCCATCTCTGGTCCTTAGCA  350

seq1  CTCCACTGATCTCTCACTTCCCAAGCAGCTCCTCCTTTGCCTTTGTCCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACTGATCTCTCACTTCCCAAGCAGCTCCTCCTTTGCCTTTGTCCCT  400

seq1  TCTCTTATTTTTGTTGGTATTGTAAACTTTATGTGCCCAGTACAGGGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTATTTTTGTTGGTATTGTAAACTTTATGTGCCCAGTACAGGGAAA  450

seq1  TGCCAGGGCCAAGAAGTGGGAGTGGGTGGGTAGGGGA  487
      |||||||||||||||||||||||||||||||||||||
seq2  TGCCAGGGCCAAGAAGTGGGAGTGGGTGGGTAGGGGA  487


| Home | SequenceCutter | Blast | Download |