BAC Information

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BAC

Clone NameB6Ng01-294J11
Chromosome8 (Build37)
Map Location 33,468,675 - 33,469,813
singlet/doubletsinglet
Overlap genenone
Upstream gene7420700N18Rik, LOC100041329, EG330731, LOC100041340, Nrg1, 2010007E15Rik, EG666589
Downstream geneEG546052, LOC100042715, LOC628408, EG628412, Wrn
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-294J11.bB6Ng01-294J11.g
ACCGA090680GA090681
length1,1821,135
definitionB6Ng01-294J11.b B6Ng01-294J11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatattggatattagtccc
ctatccgatttgggataggtaaagatcctttcccaatctgttggtggcct
ttttgtcttattgacggtgtcttttgctttgcagaagctttgcaatttta
tgaggtcccatttatcgattcttgatcttacagcacaagcctttgctgtt
ctattcaggaatttttcccctgtacccatatcttcgaggcttttccctac
tttctcctctataagtttcagtgtctctggtttttgtggagttccttaat
ccacttagatttgaccttagtacaaggagatagaaatggatcaattcgca
ttcttctacatgataaccgccagttgtgccagcaccatttgttgaaaatg
ctgtcttttttccactggatggttttagctcccttgtcaaagatcaagtg
accataggtgtgtgggttcatctctgggtcttcaattctgttccattggt
ctacttgtctgtcactataccagtaccatgcagttttgatcacaattgct
ctgtagtacagttttaggtctggcatggtgattccaccagaggttctttt
atccttgagaagagtttttgctatcctcgtttttttgttattccagatga
atctgccgattgccctttctaattcgttgaagaattgagttggaattttg
atggggattgcattgaatctgtagattgcttttggcaagatagccatttt
tacaatgttgatcctgccaatccatgagcatgggagatctttccatcttc
tgagatcttattccacttcactccagtcagaatggctaagatcaaaaact
caagtgacagcagatgttggcgagatgtgaagaatgggaacacctcctcc
atgttggtgggatgcagcttgtacaccacctctggaaatcagtctgcgtc
tcagaaaatgacatagtactacggagatcgcaatacctctcctggcatta
ttcggagaatgtcacttgtaagaaggaccatgctcactattgttctaatg
cagctctgtttacatgtcgagactggaagaactatgcctcacaggagtgt
actacgaatgtgtcacgtgacgcaactagata
gaattccacttcccaagagaaaaccacagcaatttcctgacactccctct
aggcacctgtctctttactcatgtgtggacatttgtgttgttataaatgt
gatcacattcgagatctactttttaacaagcactaattggactataggga
accatgttagaatgggagggaaatagattattcaagagctgtttaggaat
aagaagcacaacaggatgaactgcaaatgggagatggggagttaggaaca
gaattttgctttttatatggcagagccagttagaatggctttgacttcgg
agaacagtatcattcttaactaaactaattttgtttgttggttggtttgt
ttgaggcaaactttctctgtgtagccctggctgccctggaactccctatg
tagaccaggctggccttgaactcacagagacctgcctgcctctccctcct
gagtgcagggaagaaaggtgttcagctccacctcctggcatgcattcttt
gctcatttgttagtattactgtctgtactaatttccatgccatgcatgat
ttctcagtgcatcctcttttctctcttaaaaatatccattttttgtcggt
ctgcatatatgttgtggaccatgcatgtccctgatgtccaaggaggctgg
gagaggatgtcagagttacagactagtaagccatcatgtgggtgctgaga
accaaacccagtgcctctgcaacagcaccaaatacccttaactgctggac
catctctctagctccatcctatttcgtgtgtgtagcttcatatgtaattt
agttaactaacgacaaatatttaagttgagcagcttcgttttattctcca
cgattttcagcaaagcaaaagtgagcattcttatgatggcatttggtttc
ccagctactcaactttctagttaggataaattccagaaaagaaaatcact
tcgctaaaggtatcacagcatacattggtgatgaatgttgacagtttgcc
tacataaagctggactattaggcttatgccaacagaacaggaagtggtac
ccttatcatgtctttgtccccttgccaggcctggataacatgtgattctt
ccaaaaaaacatttgaatggctcattgaaaataga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_33468675_33469813
seq2: B6Ng01-294J11.g_64_1198

seq1  GAATTCCACTTCCCAAGAGAAAACCACAGCAATTTCCTGACACTCCCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACTTCCCAAGAGAAAACCACAGCAATTTCCTGACACTCCCTCT  50

seq1  AGGCACCTGTCTCTTTACTCATGTGTGGACATTTGTGTTGTTATAAATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACCTGTCTCTTTACTCATGTGTGGACATTTGTGTTGTTATAAATGT  100

seq1  GATCACATTCGAGATCTACTTTTTAACAAGCACTAATTGGACTATAGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCACATTCGAGATCTACTTTTTAACAAGCACTAATTGGACTATAGGGA  150

seq1  ACCATGTTAGAATGGGAGGGAAATAGATTATTCAAGAGCTGTTTAGGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGTTAGAATGGGAGGGAAATAGATTATTCAAGAGCTGTTTAGGAAT  200

seq1  AAGAAGCACAACAGGATGAACTGCAAATGGGAGATGGGGAGTTAGGAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGCACAACAGGATGAACTGCAAATGGGAGATGGGGAGTTAGGAACA  250

seq1  GAATTTTGCTTTTTATATGGCAGAGCCAGTTAGAATGGCTTTGACTTCGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTGCTTTTTATATGGCAGAGCCAGTTAGAATGGCTTTGACTTCGG  300

seq1  AGAACAGTATCATTCTTAACTAAACTAATTTTGTTTGTTGGTTGGTTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAGTATCATTCTTAACTAAACTAATTTTGTTTGTTGGTTGGTTTGT  350

seq1  TTGAGGCAAACTTTCTCTGTGTAGCCCTGGCTGCCCTGGAACTCCCTATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGCAAACTTTCTCTGTGTAGCCCTGGCTGCCCTGGAACTCCCTATG  400

seq1  TAGACCAGGCTGGCCTTGAACTCACAGAGACCTGCCTGCCTCTCCCTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACCAGGCTGGCCTTGAACTCACAGAGACCTGCCTGCCTCTCCCTCCT  450

seq1  GAGTGCAGGGAAGAAAGGTGTTCAGCTCCACCTCCTGGCATGCATTCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCAGGGAAGAAAGGTGTTCAGCTCCACCTCCTGGCATGCATTCTTT  500

seq1  GCTCATTTGTTAGTATTACTGTCTGTACTAATTTCCATGCCATGCATGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATTTGTTAGTATTACTGTCTGTACTAATTTCCATGCCATGCATGAT  550

seq1  TTCTCAGTGCATCCTCTTTTCTCTCTTAAAAATATCCATTTTTTGTCGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAGTGCATCCTCTTTTCTCTCTTAAAAATATCCATTTTTTGTCGGT  600

seq1  CTGCATATATGTTGTGGACCATGCATGTCCCTGATGTCCAAGGAGGCTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATATATGTTGTGGACCATGCATGTCCCTGATGTCCAAGGAGGCTGG  650

seq1  GAGAGGATGTCAGAGTTACAGACTAGTAAGCCATCATGTGGGTGCTGAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGATGTCAGAGTTACAGACTAGTAAGCCATCATGTGGGTGCTGAGA  700

seq1  ACCAAACCCAGTGCCTCTGCAACAGCACCAAATACCCTTAACTGCTGGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAACCCAGTGCCTCTGCAACAGCACCAAATACCCTTAACTGCTGGAC  750

seq1  CATCTCTCTAGCTCCATCCTATTTCGTGTGTGTAGCTTCATATGTAATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCTCTAGCTCCATCCTATTTCGTGTGTGTAGCTTCATATGTAATTT  800

seq1  AGTTAACTAACGACAAATATTTAAGTTGAGCAGCTTCGTTTTATTCTCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAACTAACGACAAATATTTAAGTTGAGCAGCTTCGTTTTATTCTCCA  850

seq1  CGATTTTCAGCAAAGCAAAAGTGAGCATTCTTATGATGGCATTTGGTTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATTTTCAGCAAAGCAAAAGTGAGCATTCTTATGATGGCATTTGGTTTC  900

seq1  CCAGCTACTCAACTTTCTAGTTAGGATAAATTCCAGAAAAGAAAATCACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTACTCAACTTTCTAGTTAGGATAAATTCCAGAAAAGAAAATCACT  950

seq1  TCGCTAAAAGGTATCACAGCATACATT-GTGATGAATGTTGACAAGTTTG  999
      ||||| ||||||||||||||||||||| ||||||||||||||| ||||||
seq2  TCGCT-AAAGGTATCACAGCATACATTGGTGATGAATGTTGAC-AGTTTG  998

seq1  CCTACATAAAAGCTGGACTAATTTAGGCTTATGCCAACAGAACAAGAAAG  1049
      ||||||| ||||||||||||  |||||||||||||||||||||| |||  
seq2  CCTACAT-AAAGCTGGACTA--TTAGGCTTATGCCAACAGAACAGGAAGT  1045

seq1  TGTACCCTAATCAATGTC-TTGTCCCCTTGCCAGCCCTGGATAACA-CTG  1097
       ||||||| ||| ||||| ||||||||||||||| |||||||||||  ||
seq2  GGTACCCTTATC-ATGTCTTTGTCCCCTTGCCAGGCCTGGATAACATGTG  1094

seq1  A-TCTTTCAAAAAAACATTTTAAAATGCTCATTTAAAAATAGA  1139
      | |||| |||||||||| ||| ||  ||||| || ||||||||
seq2  ATTCTTCCAAAAAAACA-TTTGAATGGCTCA-TTGAAAATAGA  1135