BAC Information

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BAC

Clone NameB6Ng01-297C03
Chromosome8 (Build37)
Map Location 54,392,616 - 54,393,681
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC623935, 1190028D05Rik, LOC676688
Downstream geneAga, Neil3, LOC100040107, Vegfc
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-297C03.bB6Ng01-297C03.g
ACCGA092568GA092569
length1,068601
definitionB6Ng01-297C03.b B6Ng01-297C03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcataattgcctaatataaagaatctctaattgatcaattgttaat
tgatttaaactctatatatgcaggctagctttatatatgcagggaatcac
ttttattacagtcattgcatctttaaacttgataaaatattttccaaaga
agttgccagcaaaaacagtatttctaaagtttgcactgtgtaaccaagac
tctaggcatgaatcattgtggggaagaaagaaagacttgatttattagta
ggtcattttataatattttcacagatttccatgaggtaattatttttata
taatttctaaaatatcttcactttcttgtatatatttctagaaatattaa
atatagaggaagatacactataaaatgaaccacatataaacacatatgta
aaataatatataattaaatatcacgttaaatttattccatttatttccaa
ttgttaaagcattctcaatacacacacacacacacacacacacacacaca
catacaacatacatgtatatacaaagagagaaatataacctgcaacctgc
tacattttttatttttctacctatatgtgtttaggattaaccacgtgtga
ttacataaccaataagcagctagtccttgcagaagggtggtttgctctct
ctcagcctaaacttacctaggtgaggagccctgtaagattcccacaccca
tatcagcatatcttctggtggtatagtcataactagtgaatgaaatgtgg
agagccatgaagccagcacaactgtagacagagtctggcaaaggtgagct
ggatgctatcttcaccttcgtgctgccttttccttggcttctttaactct
atgtgttgcatctgtgggggaacttttacattacaattcatttatgtctt
ttcctagaaaattatttcaaccctcaaagaagtaaccttatctggcccta
ctcaagagacttccttaccatggagaatgtgcaaacaacaaaaaaaggtt
ggataagccccagagttctcttggcattaccttaccctaaacatactcag
aaacgatagaatttggca

gaattcagtgagtcagcgcagtggagttgtggtcatgaagttcagtgcag
gtcaacagagcaagttgaagccagagaataaggatccagaagattagaac
aaattgccagaggtagtttgaagccaagcagagcaatttggtgagaagtc
gagagaagccaggttgaatcagtcatcttggagaggcagttgggctacaa
gagctgagttggaacagccaaagttcaaagggaactagaaagaatgagct
tatgcaagagtaagcctagagatgacaattagatcagacaaataaaagtt
acttttacacatactgtttcctcagaaaacgaggcctagaaacatctttt
taaccaccagatacttgtactgccccctcttatttctaagtttcagaagg
cagccttctaccttaacgcttacaaagtgaacagcatgtttcactgtccc
atgaaattgtacaatagcacaaatgatgattttggttaggtttctgactt
cctcataagttactgatacttactaaggattctttttttattgtttgttt
tgttttttgtttttttttttgttttttgtttttgttgttgttgttgggtt
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_54392616_54393681
seq2: B6Ng01-297C03.b_47_1114

seq1  GAATTCATAATTGCCTAATATAAAGAATCTCTAATTGATCAATTGTTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAATTGCCTAATATAAAGAATCTCTAATTGATCAATTGTTAAT  50

seq1  TGATTTAAACTCTATATATGCAGGCTAGCTTTATATATGCAGGGAATCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTAAACTCTATATATGCAGGCTAGCTTTATATATGCAGGGAATCAC  100

seq1  TTTTATTACAGTCATTGCATCTTTAAACTTGATAAAATATTTTCCAAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTACAGTCATTGCATCTTTAAACTTGATAAAATATTTTCCAAAGA  150

seq1  AGTTGCCAGCAAAAACAGTATTTCTAAAGTTTGCACTGTGTAACCAAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGCCAGCAAAAACAGTATTTCTAAAGTTTGCACTGTGTAACCAAGAC  200

seq1  TCTAGGCATGAATCATTGTGGGGAAGAAAGAAAGACTTGATTTATTAGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGCATGAATCATTGTGGGGAAGAAAGAAAGACTTGATTTATTAGTA  250

seq1  GGTCATTTTATAATATTTTCACAGATTTCCATGAGGTAATTATTTTTATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATTTTATAATATTTTCACAGATTTCCATGAGGTAATTATTTTTATA  300

seq1  TAATTTCTAAAATATCTTCACTTTCTTGTATATATTTCTAGAAATATTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTCTAAAATATCTTCACTTTCTTGTATATATTTCTAGAAATATTAA  350

seq1  ATATAGAGGAAGATACACTATAAAATGAACCACATATAAACACATATGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGAGGAAGATACACTATAAAATGAACCACATATAAACACATATGTA  400

seq1  AAATAATATATAATTAAATATCACGTTAAATTTATTCCATTTATTTCCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATATATAATTAAATATCACGTTAAATTTATTCCATTTATTTCCAA  450

seq1  TTGTTAAAGCATTCTCAATACACACACACACACACACACACACACACACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAAAGCATTCTCAATACACACACACACACACACACACACACACACA  500

seq1  CATACAACATACATGTATATACAAAGAGAGAAATATAACCTGCAACCTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAACATACATGTATATACAAAGAGAGAAATATAACCTGCAACCTGC  550

seq1  TACATTTTTTATTTTTCTACCTATATGTGTTTAGGATTAACCACGTGTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTTTTATTTTTCTACCTATATGTGTTTAGGATTAACCACGTGTGA  600

seq1  TTACATAACCAATAAGCAGCTAGTCCTTGCAGAAGGGTGGTTTGCTCTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATAACCAATAAGCAGCTAGTCCTTGCAGAAGGGTGGTTTGCTCTCT  650

seq1  CTCAGCCTAAACTTACCTAGGTGAGGAGCCCTGTAAGATTCCCACACCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCCTAAACTTACCTAGGTGAGGAGCCCTGTAAGATTCCCACACCCA  700

seq1  TATCAGCATATCTTCTGGTGGTATAGTCATAACTAGTGAATGAAATGTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGCATATCTTCTGGTGGTATAGTCATAACTAGTGAATGAAATGTGG  750

seq1  AGAGCCATGAAGCCAGCACAACTGTAGACAGAGTCTGGCAAAGGTGAGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCATGAAGCCAGCACAACTGTAGACAGAGTCTGGCAAAGGTGAGCT  800

seq1  GGATGCTATCTTCACCTTCGTGCTGCCTTTTCCTTGGCTTCTTTAACTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCTATCTTCACCTTCGTGCTGCCTTTTCCTTGGCTTCTTTAACTCT  850

seq1  ATGTGTTGCATCTGTGGGGGAACTTTTACATTACAATTCATTTATGTCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTTGCATCTGTGGGGGAACTTTTACATTACAATTCATTTATGTCTT  900

seq1  TTCCTAGAAAATTATTTCAACCCTCAAAGAAGTAACCTTATCTGGCCCTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAGAAAATTATTTCAACCCTCAAAGAAGTAACCTTATCTGGCCCTA  950

seq1  CTCAAGAGACTTCCTTACCATGGAGAATGTGCAAAACAC-AAAAAAGGTT  999
      |||||||||||||||||||||||||||||||||||  || ||||||||||
seq2  CTCAAGAGACTTCCTTACCATGGAGAATGTGCAAACAACAAAAAAAGGTT  1000

seq1  GGATAAGCCCCAGAGTTCTCTTGGCATTACCTAACCCTAAACATACTCAG  1049
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GGATAAGCCCCAGAGTTCTCTTGGCATTACCTTACCCTAAACATACTCAG  1050

seq1  AAACGATAG-ATTTGGCA  1066
      ||||||||| ||||||||
seq2  AAACGATAGAATTTGGCA  1068


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