BAC Information

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BAC

Clone NameB6Ng01-297P05
Chromosome8 (Build37)
Map Location 42,342,137 - 42,478,372
singlet/doubletdoublet
Overlap genePcm1, Asah1
Upstream geneFgf20, 2900075B16Rik, Zdhhc2, Cnot7, Vps37a, Mtmr7, LOC100039179, Adam24, LOC667019, LOC100039170, LOC436137, Adam25, EG667041, LOC667052, LOC384806, Adam39, LOC384808, EG667077, Slc7a2, Pdgfrl, Mtus1, Fgl1
Downstream geneFrg1, LOC100039376, Gm1815, LOC671994, Zfp353, EG620772
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-297P05.bB6Ng01-297P05.g
ACCGA093184GA093185
length1,150427
definitionB6Ng01-297P05.b B6Ng01-297P05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(42,342,137 - 42,343,284)(42,477,940 - 42,478,372)
sequence
gaattcagttatgaaggtatgagtaaatgtaagtattttctagttaaaat
agcattttgttctgaatttatatagtatgtagtagatttttgcctataaa
atactaatggggacagtagtagttatactggtgcttgccaagtgctaggt
attattctaaatattcatacatatttttaatcttatttttaaggtgccct
attttaaaggttaaaaaagcgatcccatgtgaaattacgggatttgccta
gtgtttctttagtggtaattgctttagaacctaggtcaattgtatttcta
tcttttttgttatacatacagattttcaactaaaggagacctgttaaaga
cgtatttatttcactacttaatttagaacagttttttttttaaccttttt
aaggtaaaggttttactatacagcccaagctagctgcccttgaattcttt
taaacattccagcttttttttctcagtccctcagtgttgagatttattga
tatcagaacagatagatggaaagaagagtttttagaaatgcttttgaggt
gggcctagtagtgcatccctgtagtcttatacacgtagacaattgataga
ctgaaataggagaatcatgagttcaagaataacctggattgtatggtgaa
ttcaaggcagtcagaaccaacaagaccttatttcaaaaaagaaactattg
aaaatatttaaattgatttgcatattgagatttgtgatttggagcttaat
atttattatcagtaataggaaggtaataggctttttaaagatcaagctga
aatattaggatagatgtaataatgaaaaacaaacaaacaaacaaaacaga
tttcacagaaataaatctctaaggtagagtatttgtgtgtgaaaatgtct
tggaattttaatatccacatcaaagttctgtttttgttttttgaacatta
ctaaattatttttctgggtttgaattgggtcagattaaccttttgctttt
actttttttaaaggagtggggtggccacaggaagaaggcatagatcatca
gaaggattagaaaagtttgtgtagcagttgataaggagggtaactaacgc
ttattttcttcggagtcatcgccaagagtgggaaggctaagaaccaagat

ctaaccttctgcttctacttcccaagtactggggctgggttgcagtcacg
tgcccccatgcctgacttacagcgtcttacttaaactgaagtcactggga
ctgaagatgtgagctagtgagagggataagggttaggtttcaggttgctg
tgggggagcattgccgagatgctgtggtgatgggggtgtgtggaacccat
cctgacagacaaggacagtaaggtgtgtcaaaaccagtatttggaatcct
atatgattctccaactttgagtgcataggaatgaaagttgaactcaacac
tagaaaaaaatcagaaggggcattatgtagagggggtatagaggagtggt
ttttccaaggatttctttaggaaacttatgttctgtttgttcttctggaa
ttagaatgttcttcctgcctgttttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_42342137_42343284
seq2: B6Ng01-297P05.b_49_1198

seq1  GAATTCAGTTATGAAGGTATGAGTAAATGTAAGTATTTTCTAGTTAAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTATGAAGGTATGAGTAAATGTAAGTATTTTCTAGTTAAAAT  50

seq1  AGCATTTTGTTCTGAATTTATATAGTATGTAGTAGATTTTTGCCTATAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTTGTTCTGAATTTATATAGTATGTAGTAGATTTTTGCCTATAAA  100

seq1  ATACTAATGGGGACAGTAGTAGTTATACTGGTGCTTGCCAAGTGCTAGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTAATGGGGACAGTAGTAGTTATACTGGTGCTTGCCAAGTGCTAGGT  150

seq1  ATTATTCTAAATATTCATACATATTTTTAATCTTATTTTTAAGGTGCCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTCTAAATATTCATACATATTTTTAATCTTATTTTTAAGGTGCCCT  200

seq1  ATTTTAAAGGTTAAAAAAGCGATCCCATGTGAAATTACGGGATTTGCCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAAGGTTAAAAAAGCGATCCCATGTGAAATTACGGGATTTGCCTA  250

seq1  GTGTTTCTTTAGTGGTAATTGCTTTAGAACCTAGGTCAATTGTATTTCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTCTTTAGTGGTAATTGCTTTAGAACCTAGGTCAATTGTATTTCTA  300

seq1  TCTTTTTTGTTATACATACAGATTTTCAACTAAAGGAGACCTGTTAAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTTGTTATACATACAGATTTTCAACTAAAGGAGACCTGTTAAAGA  350

seq1  CGTATTTATTTCACTACTTAATTTAGAACAGTTTTTTTTTTAACCTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTATTTATTTCACTACTTAATTTAGAACAGTTTTTTTTTTAACCTTTTT  400

seq1  AAGGTAAAGGTTTTACTATACAGCCCAAGCTAGCTGCCCTTGAATTCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTAAAGGTTTTACTATACAGCCCAAGCTAGCTGCCCTTGAATTCTTT  450

seq1  TAAACATTCCAGCTTTTTTTTCTCAGTCCCTCAGTGTTGAGATTTATTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACATTCCAGCTTTTTTTTCTCAGTCCCTCAGTGTTGAGATTTATTGA  500

seq1  TATCAGAACAGATAGATGGAAAGAAGAGTTTTTAGAAATGCTTTTGAGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGAACAGATAGATGGAAAGAAGAGTTTTTAGAAATGCTTTTGAGGT  550

seq1  GGGCCTAGTAGTGCATCCCTGTAGTCTTATACACGTAGACAATTGATAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTAGTAGTGCATCCCTGTAGTCTTATACACGTAGACAATTGATAGA  600

seq1  CTGAAATAGGAGAATCATGAGTTCAAGAATAACCTGGATTGTATGGTGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAATAGGAGAATCATGAGTTCAAGAATAACCTGGATTGTATGGTGAA  650

seq1  TTCAAGGCAGTCAGAACCAACAAGACCTTATTTCAAAAAAGAAACTATTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGGCAGTCAGAACCAACAAGACCTTATTTCAAAAAAGAAACTATTG  700

seq1  AAAATATTTAAATTGATTTGCATATTGAGATTTGTGATTTGGAGCTTAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATTTAAATTGATTTGCATATTGAGATTTGTGATTTGGAGCTTAAT  750

seq1  ATTTATTATCAGTAATAGGAAGGTAATAGGCTTTTTAAAGATCAAGCTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTATCAGTAATAGGAAGGTAATAGGCTTTTTAAAGATCAAGCTGA  800

seq1  AATATTAGGATAGATGTAATAATGAAAAACAAACAAACAAACAAAACAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTAGGATAGATGTAATAATGAAAAACAAACAAACAAACAAAACAGA  850

seq1  TTTCACAGAAATAAATCTCTAAGGTAGAGTATTTGTGTGTGAAAATGTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACAGAAATAAATCTCTAAGGTAGAGTATTTGTGTGTGAAAATGTCT  900

seq1  TGGAATTTTAATATCCACATCAAAGTTCTGTTTTTGTTTTTTGAACA-TA  949
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TGGAATTTTAATATCCACATCAAAGTTCTGTTTTTGTTTTTTGAACATTA  950

seq1  CTAAATTATTTTTCT-GGTTTGAATT-GGTCAGATTAA-CTTTTGCTTTT  996
      ||||||||||||||| |||||||||| ||||||||||| |||||||||||
seq2  CTAAATTATTTTTCTGGGTTTGAATTGGGTCAGATTAACCTTTTGCTTTT  1000

seq1  AC-TTTTTTAAAGGAGTGGGGTGGCCAACAGAAGAAGGCCAATAGATCAT  1045
      || ||||||||||||||||||||||||   |||||||||  |||||||||
seq2  ACTTTTTTTAAAGGAGTGGGGTGGCCACAGGAAGAAGGC--ATAGATCAT  1048

seq1  CAGAAAAGAATAAGAAAAAGTTTGGTGTAGCAAGTGATAA-GAGGGTAAC  1094
      |||  ||| || || |||||||| ||||||||  |||||| |||||||||
seq2  CAG--AAGGATTAG-AAAAGTTT-GTGTAGCAGTTGATAAGGAGGGTAAC  1094

seq1  TAACGCT--ATTTCTCCGGAGTCATCGCCAGGAGTTGGAAGGCGAAGAAC  1142
      |||||||   ||||| |||||||||||||| |||| ||||||| ||||||
seq2  TAACGCTTATTTTCTTCGGAGTCATCGCCAAGAGTGGGAAGGCTAAGAAC  1144

seq1  AAAGAT  1148
       |||||
seq2  CAAGAT  1150

seq1: chr8_42477940_42478372
seq2: B6Ng01-297P05.g_69_500 (reverse)

seq1  GAAAACAGGCAGGAAGAACAATCTATTTCCAGAAGAACAAACAGAACATA  50
      |||||||||||||||||||| |||| ||||||||||||||||||||||||
seq2  GAAAACAGGCAGGAAGAACATTCTAATTCCAGAAGAACAAACAGAACATA  50

seq1  AGTTTCCTAAAGAAATCCTTTGGAAAAACCACTCCTCTATACCCCCTCTA  100
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AGTTTCCTAAAGAAATCC-TTGGAAAAACCACTCCTCTATACCCCCTCTA  99

seq1  CATAATGCCCCTTCTGATTTTTTTCTAGTGTTGAGTTCAACTTTCATTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATGCCCCTTCTGATTTTTTTCTAGTGTTGAGTTCAACTTTCATTCC  149

seq1  TATGCACTCAAAGTTGGAGAATCATATAGGATTCCAAATACTGGTTTTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCACTCAAAGTTGGAGAATCATATAGGATTCCAAATACTGGTTTTGA  199

seq1  CACACCTTACTGTCCTTGTCTGTCAGGATGGGTTCCACACACCCCCATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCTTACTGTCCTTGTCTGTCAGGATGGGTTCCACACACCCCCATCA  249

seq1  CCACAGCATCTCGGCAATGCTCCCCCACAGCAACCTGAAACCTAACCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGCATCTCGGCAATGCTCCCCCACAGCAACCTGAAACCTAACCCTT  299

seq1  ATCCCTCTCACTAGCTCACATCTTCAGTCCCAGTGACTTCAGTTTAAGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTCTCACTAGCTCACATCTTCAGTCCCAGTGACTTCAGTTTAAGTA  349

seq1  AGACGCTGTAAGTCAGGCATGGGGGCACGTGACTGCAACCCAGCCCCAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGCTGTAAGTCAGGCATGGGGGCACGTGACTGCAACCCAGCCCCAGT  399

seq1  ACTTGGGAAGTAGAAGCAGAAGGTTAGGAATTC  433
      |||||||||||||||||||||||||||||||||
seq2  ACTTGGGAAGTAGAAGCAGAAGGTTAGGAATTC  432