BAC Information

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BAC

Clone NameB6Ng01-299J01
Chromosome8 (Build37)
Map Location 84,067,830 - 84,068,956
singlet/doubletsinglet
Overlap genenone
Upstream geneFrem3, Smarca5, Gab1, LOC666237, LOC100039496, LOC234501, LOC100039518, Usp38, EG70793, LOC236010, LOC384852
Downstream geneInpp4b, LOC671182, Il15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-299J01.bB6Ng01-299J01.g
ACCGA094371GA094372
length1,1891,158
definitionB6Ng01-299J01.b B6Ng01-299J01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggtggagaagcacttgaaaaaatg
tacaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagtt
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcaaggatgtggagaaagaggaacactcctccattgctggtg
ggattgcaagctagtacaaccactctggaaataagtctggcagttcctca
gaaaattggacatagtactactggaggatcccacaatacctctcctgagc
atatatccagaagatgtcccaacttttatgaaggacccatgcttcactat
gttcatagcagccttatctataatagccagaagctggaaagaacccagat
tcccctcaacagaggaatgtatacagaaaatgtggtacatttacacactg
gagtactattcagctattaaaaagaatgaatttatgaaactcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacccaattacaaa
agaactcgcatgatatgttctcactgataagtggatattagcccagaaac
ttagaatacccaagatataggatacaatctgctaagcacaggagactcag
gaggaaggaagaccagggtgtggatggtttgccccttcttagaattggga
gcagaatgcctatggagggagttgcagagatgaagtttggagctgagacg
aaggagtggaccatctagagactgccatatctggggatccatactgtaat
cagcctccaaacgctgacaccattgcatacactagtgggattttgctgaa
aggaccctgaaatagctgtctcttttgagactatgctggggcctggcaaa
cacagaagtggatgctcataatcagctattggatggatcacagggccccc
aatgggggagctagagagagtacccaaggagctgagggatctgcaaccct
atgggtggaccaatatatgactactagtgcccccggagctcgtgtctcta
gctgtttatgtattcagagatggcctgtcggcaatcagtggaaagaagag
cccaatgtcgtgccgaacttatatgcttcatgcaggtaacccaggcctgg
aagtgggatggtgtgatgtgaagatgcgctgagtgcctt
gaattcacagtagtggggattctttcttaggaaagaaatcatgtagcact
tctttgttgctatttgtgcccctccttggggcataagctcgtgatgcagc
ctgggtgtttacctgaatttatcatttatttgaggagaactacttctgaa
gaataaacttgtcatagaaaatgaatatatttctctacagaggaactaaa
cacaactctcttataatagtagggctacatcttataaaattcctgtcaga
aacaggaagcaacaaacaatggaagtaacccatgtgctcccagaatagca
cagcatgggcatagtccaggaggaagcaacaaagacgtcttctaaaaata
tttatttatttatttatttatttatttatttatttatttatttatttatt
tatttatttattgtgcatgtgtgtatatgtgtacgaacatacacacacaa
tgaacatatacatagacacacacacagacacacacacagacacacacaga
cacacacagacacacacacaaaccacacacacaccacagcaagaggagct
tagaggtcaacttgcaggagacagatcatctactctacgaatgttggagt
ttaaacacaggccatcagctttggaacaagtgcctttccctgctgaactt
cccatcagctgtggatcatattttcctttaatcacctatactggcgtttc
attggcttttaaatttcattcatttccctctctttgctacctgagtctca
aagatcaaactcaagttgtaaagtttaggcagtaaccactttacccactg
agacattctcaacagccaggagagtaggtcttgagtggtacagtggctga
caaaaaataatgtgtaaaagtaacttggggcaccaggtagcagtaacttt
tatttcttctttatagtaattttcatctctaaaggctttacattttgttt
gttcaaggggattttgaaaatggaagttttctcattttgtaatgcaatga
agaagtctgttctataatcattttaagttgttctttttgggggtagtttt
actgtgatttcctctatcttcagaggcctccttgaatctttacttggctc
tgggcttccaaggttctggggatctccaagttctcagaactaatttaaaa
taaaaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_84067830_84068956
seq2: B6Ng01-299J01.g_68_1225

seq1  GAATTCACAGTAGTGGGGATTCTTTCTTAGGAAAGAAATCATGTAGCACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGTAGTGGGGATTCTTTCTTAGGAAAGAAATCATGTAGCACT  50

seq1  TCTTTGTTGCTATTTGTGCCCCTCCTTGGGGCATAAGCTCGTGATGCAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTTGCTATTTGTGCCCCTCCTTGGGGCATAAGCTCGTGATGCAGC  100

seq1  CTGGGTGTTTACCTGAATTTATCATTTATTTGAGGAGAACTACTTCTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTGTTTACCTGAATTTATCATTTATTTGAGGAGAACTACTTCTGAA  150

seq1  GAATAAACTTGTCATAGAAAATGAATATATTTCTCTACAGAGGAACTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAACTTGTCATAGAAAATGAATATATTTCTCTACAGAGGAACTAAA  200

seq1  CACAACTCTCTTATAATAGTAGGGCTACATCTTATAAAATTCCTGTCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACTCTCTTATAATAGTAGGGCTACATCTTATAAAATTCCTGTCAGA  250

seq1  AACAGGAAGCAACAAACAATGGAAGTAACCCATGTGCTCCCAGAATAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGAAGCAACAAACAATGGAAGTAACCCATGTGCTCCCAGAATAGCA  300

seq1  CAGCATGGGCATAGTCCAGGAGGAAGCAACAAAGACGTCTTCTAAAAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATGGGCATAGTCCAGGAGGAAGCAACAAAGACGTCTTCTAAAAATA  350

seq1  TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATT  400

seq1  TATTTATTTATTGTGCATGTGTGTATATGTGTACGAACATACACACACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTTATTGTGCATGTGTGTATATGTGTACGAACATACACACACAA  450

seq1  TGAACATATACATAGACACACACACAGACACACACACAGACACACACAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACATATACATAGACACACACACAGACACACACACAGACACACACAGA  500

seq1  CACACACAGACACACACACAAACCACACACACACCACAGCAAGAGGAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACAGACACACACACAAACCACACACACACCACAGCAAGAGGAGCT  550

seq1  TAGAGGTCAACTTGCAGGAGACAGATCATCTACTCTACGAATGTTGGAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGTCAACTTGCAGGAGACAGATCATCTACTCTACGAATGTTGGAGT  600

seq1  TTAAACACAGGCCATCAGCTTTGGAACAAGTGCCTTTCCCTGCTGAACTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACACAGGCCATCAGCTTTGGAACAAGTGCCTTTCCCTGCTGAACTT  650

seq1  CCCATCAGCTGTGGATCATATTTTCCTTTAATCACCTATACTGGCGTTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCAGCTGTGGATCATATTTTCCTTTAATCACCTATACTGGCGTTTC  700

seq1  ATTGGCTTTTAAATTTCATTCATTTCCCTCTCTTTGCTACCTGAGTCTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCTTTTAAATTTCATTCATTTCCCTCTCTTTGCTACCTGAGTCTCA  750

seq1  AAGATCAAACTCAAGTTGT-AAGTTTAGGCAGTAACCACTTTACCCACTG  799
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AAGATCAAACTCAAGTTGTAAAGTTTAGGCAGTAACCACTTTACCCACTG  800

seq1  AGACA-TCTCAACAGCCAGGAGAGTAGGTCTTGAGTGGTACAGTGGCTGA  848
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATTCTCAACAGCCAGGAGAGTAGGTCTTGAGTGGTACAGTGGCTGA  850

seq1  CAAAAAATAATGTGTAAAAGTAACTT-GGGCACCAGGTAGCAGTAACTTT  897
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CAAAAAATAATGTGTAAAAGTAACTTGGGGCACCAGGTAGCAGTAACTTT  900

seq1  TA-TTCT--CTTATAGTAATTTTCATCTCTAAAGGC-TTACA-TTTGTT-  941
      || ||||   |||||||||||||||||||||||||| ||||| |||||| 
seq2  TATTTCTTCTTTATAGTAATTTTCATCTCTAAAGGCTTTACATTTTGTTT  950

seq1  -GTCAA-GGGATTT--GAAATGGA--GTTTCTCA-TTTGTAATGC-ATGA  983
        |||| |||||||   |||||||   ||||||| |||||||||| ||||
seq2  GTTCAAGGGGATTTTGAAAATGGAAGTTTTCTCATTTTGTAATGCAATGA  1000

seq1  AG-AGTCTG-TCTAT-ATCA-TTTAAGTTG-TCTTTT--GGGGTAG-TTT  1025
      || |||||| ||||| |||| ||||||||| ||||||  ||||||| |||
seq2  AGAAGTCTGTTCTATAATCATTTTAAGTTGTTCTTTTTGGGGGTAGTTTT  1050

seq1  ACTGTGATT--CTCTATC-TCAGAGG-CTCC-TGAATCTTTCCTT-GCTC  1069
      |||||||||  ||||||| ||||||| |||| ||||||||| ||| ||||
seq2  ACTGTGATTTCCTCTATCTTCAGAGGCCTCCTTGAATCTTTACTTGGCTC  1100

seq1  TGGGCT--CCAGGTTCTGGGGTCTTCCAAGTTTCTTCAGACCAAATTTAA  1117
      ||||||  | |||||||||||   ||||||||   ||||| | |||||||
seq2  TGGGCTTCCAAGGTTCTGGGGATCTCCAAGTT--CTCAGAACTAATTTAA  1148

seq1  AAAAAAAATG  1127
      || |||||||
seq2  AATAAAAATG  1158