BAC Information

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BAC

Clone NameB6Ng01-301K15
Chromosome8 (Build37)
Map Location 50,146,001 - 50,303,776
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100040113, Dctd, Odz3, 2900073C17Rik, LOC100039866
Downstream gene4930555F03Rik, LOC100039919, EG667495
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-301K15.bB6Ng01-301K15.g
ACCGA095918GA095919
length1,0241,044
definitionB6Ng01-301K15.b B6Ng01-301K15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(50,302,774 - 50,303,776)(50,146,001 - 50,147,061)
sequence
gaattcttctgtgtgtgtgtgtaggtgtgtgtgtgtgtgtgtgtgtgtgt
gtgtgtgtgtatgaatgggtagttctctacatctgtgcagtcctttcttc
tctttattttgtccaaacccaatgcatttgtatttgttttatcttattat
attttattattattccttagaatcctttttgttttctaatgtgagacaga
aagagaatgggtctagacaggaggagaggtggggaagaaatagaaagagt
gaagggagagaaatatatatataatcaggatatattatgttagaaaaaat
ctattttctgtaaaaatggaaaaatgattcttcagaataatatatttctt
tctccattgtcaagttgctgggccagtttgtaagcaagcttcacaggatg
ataaattcctataagcaattcttcatgaccagtacatgggtagaatacaa
aactttccctctcttcgctatcagagttcaaaatgaagcatagctctcac
gttaaaagattaaggagccacacaaaaatgcctcttgaaatatcccatgt
gagctgaaacgtcatctgcattgaatccatggactagattccatagattg
gacagattaaacctcagtgccgagcatgtaacaacactatagcatagact
ttacattgatcccatgagaaatacaattatttggactatgtatgtgttca
ttttaaatgttcacctggaattttcctgactccttgcctccatactccaa
gctgcatctggggagcattgatgtttaatgcatcatccgctcagacagaa
aaggtcagtgtgggttggagtatgcttatggtttgaagacttccattaaa
atgggcagtttgattttgggatgactgttttgtcttaggcaagaaaagtc
aacttaaagtttaggtccaactaatgaacagcactaagatttaactttga
gctgaatttccaactccccaattcttggtgtgagattgcagggacttaac
ataaaaatcttgttcttttctata
gaattcataactataatcgtgttaaagcctgagctaagttttatttgttt
ttctttagacttttatgaacttctgtatgatacaactcaggtaaactact
agaagacaatgtcccatgcctcactctataggcaatggcttctactggga
aagtcagtcattaaactcgaaatgcaagttacttgcttttgaatttgaac
tgatataaaaaggcggggttttttgtttgtttgtttgttttgttttttgt
tttttttgacattggggaaaatacttctttaaatgctcttatcaatcaat
taagatttaaagtcttttgccataggattcaaggaaacagaatgccaact
atgtttcaccaatatcaaatgaaacccaggccaataattgagactttctt
ttctgcattgtaaataatgtctaaaaatatgaccagcaaaattaatttca
caatttcacactatcttaaagtcaatataatcatatagcctttcaaaact
gtgtttaaagaaacattgtgaagacatttttttttttttataataaccta
attaggtagaaggtgagtttttgaagaaaaactcaaatttggcttgggaa
ggtgtgaacatttttaacccagaaatgcatttttcataactttatcattg
tgtggagcctcataagttgatcacaggggtaggtaggtaattaaaggtta
cacctgattctgagtcctggcagtgcactctgattcctggcccactatga
tgggaacagcctcgacccagtgctcccaccaccagaaaccaagctgctct
ggcggcctcccttgccacgatgcactgaaactatctgaaagtgtgtccaa
acaagtcctctcttcttacgatgtttctgttacgtgtggtggtcacaacc
atacccaggtgacttacgtaacggctaggaagtgtaagaaaaagagcaca
gggtggtaaaaaggtagaattccccaaggattccagcacgttgtttcttc
atgggagactactgtgttttctcatagggaggacaacttggtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_50302774_50303776
seq2: B6Ng01-301K15.b_46_1069 (reverse)

seq1  TATAGAAAAG-ACAAGATTTT--TGTT-AGTTCCTGC-ATCTCACA-CAA  44
      |||||||||| ||||||||||  |||| ||| ||||| |||||||| |||
seq2  TATAGAAAAGAACAAGATTTTTATGTTAAGTCCCTGCAATCTCACACCAA  50

seq1  GAATTGGGGAGTTGG-AATTCAGCTC-AAGTTAAATTCTTAGTGCTG-TC  91
      ||||||||||||||| |||||||||| |||||||| ||||||||||| ||
seq2  GAATTGGGGAGTTGGAAATTCAGCTCAAAGTTAAA-TCTTAGTGCTGTTC  99

seq1  ATTAGTTGGACCTAAAC-TTAAGTTGAC-TTTCTTGCCTAAGGCAAAACA  139
      ||||||||||||||||| |||||||||| ||||||||||||| |||||||
seq2  ATTAGTTGGACCTAAACTTTAAGTTGACTTTTCTTGCCTAAGACAAAACA  149

seq1  GTCATCCC-AAATC-AACTG-CCATTTTAATGG-AGTCTTCAAACCAT-A  184
      |||||||| ||||| ||||| |||||||||||| |||||||||||||| |
seq2  GTCATCCCAAAATCAAACTGCCCATTTTAATGGAAGTCTTCAAACCATAA  199

seq1  GCATACTCC-ACCCACACTGACCTTTTCTGTCTGAGCGGATGATGCATTA  233
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GCATACTCCAACCCACACTGACCTTTTCTGTCTGAGCGGATGATGCATTA  249

seq1  AACATCAATGCT-CCCAGATGCAGCTTGGAGTATGGAGGCAAGGAGTCAG  282
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AACATCAATGCTCCCCAGATGCAGCTTGGAGTATGGAGGCAAGGAGTCAG  299

seq1  GGAAATTCCAGGTG-ACATTT-AAATGAACACATACATAGTCCAAATAAT  330
      | |||||||||||| |||||| ||||||||||||||||||||||||||||
seq2  GAAAATTCCAGGTGAACATTTAAAATGAACACATACATAGTCCAAATAAT  349

seq1  TGTATTTCTCATGGGATC-ATGT-AAGTCTATGCTATAGTGTTGTTACAT  378
      |||||||||||||||||| |||| ||||||||||||||||||||||||||
seq2  TGTATTTCTCATGGGATCAATGTAAAGTCTATGCTATAGTGTTGTTACAT  399

seq1  GCTCGGCACTGAGGTTTAATCTGTCCAATCTATGGAATCTAGTCCATGGA  428
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCGGCACTGAGGTTTAATCTGTCCAATCTATGGAATCTAGTCCATGGA  449

seq1  TTCAATGCAGATGACGTTTCAGCTCACATGGGATATTTCAAGAGGCATTT  478
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATGCAGATGACGTTTCAGCTCACATGGGATATTTCAAGAGGCATTT  499

seq1  TTGTGTGGCTCCTTAATCTTTTAACGTGAGAGCTATGCTTCATTTTGAAC  528
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTGGCTCCTTAATCTTTTAACGTGAGAGCTATGCTTCATTTTGAAC  549

seq1  TCTGATAGCGAAGAGAGGGAAAGTTTTGTATTCTACCCATGTACTGGTCA  578
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATAGCGAAGAGAGGGAAAGTTTTGTATTCTACCCATGTACTGGTCA  599

seq1  TGAAGAATTGCTTATAGGAATTTATCATCCTGTGAAGCTTGCTTACAAAC  628
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAATTGCTTATAGGAATTTATCATCCTGTGAAGCTTGCTTACAAAC  649

seq1  TGGCCCAGCAACTTGACAATGGAGAAAGAAATATATTATTCTGAAGAATC  678
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCAGCAACTTGACAATGGAGAAAGAAATATATTATTCTGAAGAATC  699

seq1  ATTTTTCCATTTTTACAGAAAATAGATTTTTTCTAACATAATATATCCTG  728
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCCATTTTTACAGAAAATAGATTTTTTCTAACATAATATATCCTG  749

seq1  ATTATATATATATTTCTCTCCCTTCACTCTTTCTATTTCTTCCCCACCTC  778
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATATATATTTCTCTCCCTTCACTCTTTCTATTTCTTCCCCACCTC  799

seq1  TCCTCCTGTCTAGACCCATTCTCTTTCTGTCTCACATTAGAAAACAAAAA  828
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTGTCTAGACCCATTCTCTTTCTGTCTCACATTAGAAAACAAAAA  849

seq1  GGATTCTAAGGAATAATAATAAAATATAATAAGATAAAACAAATACAAAT  878
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCTAAGGAATAATAATAAAATATAATAAGATAAAACAAATACAAAT  899

seq1  GCATTGGGTTTGGACAAAATAAAGAGAAGAAAGGACTGCACAGATGTAGA  928
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGGGTTTGGACAAAATAAAGAGAAGAAAGGACTGCACAGATGTAGA  949

seq1  GAACTACCCATTCATACACACACACACACACACACACACACACACACACA  978
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTACCCATTCATACACACACACACACACACACACACACACACACACA  999

seq1  CCTACACACACACACAGAAGAATTC  1003
      |||||||||||||||||||||||||
seq2  CCTACACACACACACAGAAGAATTC  1024

seq1: chr8_50146001_50147061
seq2: B6Ng01-301K15.g_69_1112

seq1  GAATTCATAACTATAATCGTGTTAAAGCCTGAGCTAAGTTTTATTTGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAACTATAATCGTGTTAAAGCCTGAGCTAAGTTTTATTTGTTT  50

seq1  TTCTTTAGACTTTTATGAACTTCTGTATGATACAACTCAGGTAAACTACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTAGACTTTTATGAACTTCTGTATGATACAACTCAGGTAAACTACT  100

seq1  AGAAGACAATGTCCCATGCCTCACTCTATAGGCAATGGCTTCTACTGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGACAATGTCCCATGCCTCACTCTATAGGCAATGGCTTCTACTGGGA  150

seq1  AAGTCAGTCATTAAACTCGAAATGCAAGTTACTTGCTTTTGAATTTGAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAGTCATTAAACTCGAAATGCAAGTTACTTGCTTTTGAATTTGAAC  200

seq1  TGATATAAAAAGGCGGGGTTTTTTGTTTGTTTGTTTGTTTTGTTTTTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATAAAAAGGCGGGGTTTTTTGTTTGTTTGTTTGTTTTGTTTTTTGT  250

seq1  TTTTTTTGACATTGGGGAAAATACTTCTTTAAATGCTCTTATCAATCAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTGACATTGGGGAAAATACTTCTTTAAATGCTCTTATCAATCAAT  300

seq1  TAAGATTTAAAGTCTTTTGCCATAGGATTCAAGGAAACAGAATGCCAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATTTAAAGTCTTTTGCCATAGGATTCAAGGAAACAGAATGCCAACT  350

seq1  ATGTTTCACCAATATCAAATGAAACCCAGGCCAATAATTGAGACTTTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTCACCAATATCAAATGAAACCCAGGCCAATAATTGAGACTTTCTT  400

seq1  TTCTGCATTGTAAATAATGTCTAAAAATATGACCAGCAAAATTAATTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCATTGTAAATAATGTCTAAAAATATGACCAGCAAAATTAATTTCA  450

seq1  CAATTTCACACTATCTTAAAGTCAATATAATCATATAGCCTTTCAAAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTCACACTATCTTAAAGTCAATATAATCATATAGCCTTTCAAAACT  500

seq1  GTGTTTAAAGAAACATTGTGAAGACATTTTTTTTTTTTTATAATAACCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTAAAGAAACATTGTGAAGACATTTTTTTTTTTTTATAATAACCTA  550

seq1  ATTAGGTAGAAGGTGAGTTTTTGAAGAAAAACTCAAATTTGGCTTGGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGTAGAAGGTGAGTTTTTGAAGAAAAACTCAAATTTGGCTTGGGAA  600

seq1  GGTGTGAACATTTTTAACCCAGAAATGCATTTTTCATAACTTTATCATTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGAACATTTTTAACCCAGAAATGCATTTTTCATAACTTTATCATTG  650

seq1  TGTGGAGCCTCATAAGTTGATCACAGGGGTAGGTAGGTAATTAAAGGTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAGCCTCATAAGTTGATCACAGGGGTAGGTAGGTAATTAAAGGTTA  700

seq1  CACCTGATTCTGAGTCCTGGCAGTGCACTCTGATTCCTGGCCCACTATGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGATTCTGAGTCCTGGCAGTGCACTCTGATTCCTGGCCCACTATGA  750

seq1  TGGGAACAGCCTCGACCCAGTGCTCCCACCACCAGAAACCAAGCTGCTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAACAGCCTCGACCCAGTGCTCCCACCACCAGAAACCAAGCTGCTCT  800

seq1  GGCGGCCTCCCTTGCCACGATGCACTGAAACTATCTGAAAGTGTGTCCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGGCCTCCCTTGCCACGATGCACTGAAACTATCTGAAAGTGTGTCCAA  850

seq1  ACAAGTCCTCTCTTTCTTACGATGTTTCTGTTACGTGTGGTGGTCACAAC  900
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ACAAGTCCTCTC-TTCTTACGATGTTTCTGTTACGTGTGGTGGTCACAAC  899

seq1  CATACCCAGGTGACTTACGTAAGGGCTAGGAAGTGTAAGAAAAGAGGCAC  950
      |||||||||||||||||||||| ||||||||||||||||||||   ||||
seq2  CATACCCAGGTGACTTACGTAACGGCTAGGAAGTGTAAGAAAAAGAGCAC  949

seq1  AGGGTGGGTAAAAGGGTTAGGAATTCCCCAAAAGATTTCCAGGCAACGTG  1000
      ||||| ||||||| |||   |||||||||  |||  ||||| |||   ||
seq2  AGGGT-GGTAAAAAGGT--AGAATTCCCC--AAGGATTCCA-GCACGTTG  993

seq1  TTTCTTCCAATGGGAAGACTTACTTGTGGTTTTTCTCATAGGGGAGGACA  1050
      |||||||  ||||| |||| ||| ||||  |||||||||| |||||||| 
seq2  TTTCTTC--ATGGG-AGAC-TAC-TGTG--TTTTCTCATA-GGGAGGAC-  1034

seq1  AAACTTGGTAT  1061
       ||||||||||
seq2  -AACTTGGTAT  1044