BAC Information

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BAC

Clone NameB6Ng01-301O11
Chromosome8 (Build37)
Map Location 43,714,122 - 43,715,246
singlet/doubletsinglet
Overlap genenone
Upstream geneGm1815, LOC671994, Zfp353, EG620772, LOC628212
Downstream geneTriml1, LOC622082, EG622117, LOC100039417, Zfp42, Adam26b, Adam26a, EG384813
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-301O11.bB6Ng01-301O11.g
ACCGA096095GA096096
length1,1911,112
definitionB6Ng01-301O11.b B6Ng01-301O11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagccccatttttaatggggttatttgattt
tctggagtccaccttcttgagttctttatatatattggatattagtcccc
tatctgatttaggataggtaaagatacttttccaatctgttggtggcatt
tttgtcttattgacggtgtcttttgccttgcagaagctttgcagtttcat
ggggttccatttgtaaattctcaatcttacagcacaagcctttgctgttc
tattcaggagtttttcccctgtgcccatatctttgaggctttccccactt
tctcctctataagtttcactgtctctggttttatgtggagttccttgatc
cacttagatttgaccttagtacaaggagataggaatggatagattcgcat
tcttttacatgataaccaccagttgtgccagcaccatttgttgaaaatgc
tgtctttcttccactggatggttttagctcccttgtcgaagatcaagtga
ccataggtgtgtgggttcatttctcggtcttcaattggtctacttgtctg
tctctataccagtaccatgcagtttttatcacaattgctctgtagtacag
ctttaggtcaggcatggtgattccactagaggttcttttatccttgagaa
gagtttttgctatcctaggttttttgttattccagatgaatttgcagatt
gctctttctaattcattgaagaattgagttggaattttgatggggattgc
attaaatctgtagattgcttttggcaagatagccatttttacaatgttga
tcctgccaatccatgagcatgggagatctttccatcttctgagatcttct
ttaattcacccatggaagtagttacagagacaaatttggagctgagacaa
aggatgtaccatttagagactgccatatccagggatccatcccataatta
gcttccaaacgatgacaccattgcatacactagcaacgtttgctgaaagg
accctgataatagctgtctcttgtgagaactgttgccgggtcctagcaac
acaggaaggtggatgctcacagtcatcaatggatggattcacagagcccc
attgggaggctaggacaggtaccaggagctaaaggatctggcaccgtagt
tcacacatattggactacaggagacctggacctctggactc
gaattccttctctgatgtgggctaggataaagcaatgagctatgggaggg
aaagtggatagaaagatctgtatgatggcctggaagatgggagcagagag
gaagaggctacagaaggtggtttgctgctgagctagcatgaggctcaggg
tttgtacctgtaaaagctgagggaagaggtgaagatctactgttagccta
actgcttccctggctgaattgctgtaatgcaacaaagtcagttgaaatat
ccctaaaaataatcacaatttactccccagaaaaatgtctgagagagtta
taatagtgactttgccaattttatttaataataggatatttactgaaacg
atttgtttttcaaagacaaacaaaatattttctatttgaattggaaatga
tttttgtagtatggaaaacatctcaaagttaaggtgttttagcttctgta
gttttttactagttaataagagtactaggctaccaaagtttatatgagtt
agtgttcactgcatttgaccaattgagtgaatgcaaccataaagttgata
aaatatgaactattcttagcagcccagtgaacagatcgggctatgtttgt
tattaattactttgtggttgattctcttagatgtattcacaaaaaatatc
ataaatatgggcagaataaaactttataagtcctttcctttgacttaatc
tttttaagctattctagaagtatgatgtcgcagttgagattttggggaca
atcttcgtggaagtgtgaagtacatcgtcgtctgggcagggatcaatgtt
ttgcacctgcactaaaccttctaaatctttgtagttgtttgccatctata
atgaatagaacaagccatcgctctggaaagcaacaccatgaaagaatatt
ggcaaataaagctcactatgaaatttgaatttcaactgcacagaattttt
gagagaatttatttaatttattccatgcttctagaagcatggtgtttctt
taatctgttctgcccatttgttaatgtacagtattgtctgtgtttacatg
agtcaaataaaaatctctgttgaaaacctgaaataacgcaggcttggagt
tagccgtagctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_43714122_43715246
seq2: B6Ng01-301O11.g_67_1178

seq1  GAATTCCTTCTCTGATGTGGGCTAGGATAAAGCAATGAGCTATGGGAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCTCTGATGTGGGCTAGGATAAAGCAATGAGCTATGGGAGGG  50

seq1  AAAGTGGATAGAAAGATCTGTATGATGGCCTGGAAGATGGGAGCAGAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGGATAGAAAGATCTGTATGATGGCCTGGAAGATGGGAGCAGAGAG  100

seq1  GAAGAGGCTACAGAAGGTGGTTTGCTGCTGAGCTAGCATGAGGCTCAGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGGCTACAGAAGGTGGTTTGCTGCTGAGCTAGCATGAGGCTCAGGG  150

seq1  TTTGTACCTGTAAAAGCTGAGGGAAGAGGTGAAGATCTACTGTTAGCCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTACCTGTAAAAGCTGAGGGAAGAGGTGAAGATCTACTGTTAGCCTA  200

seq1  ACTGCTTCCCTGGCTGAATTGCTGTAATGCAACAAAGTCAGTTGAAATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTTCCCTGGCTGAATTGCTGTAATGCAACAAAGTCAGTTGAAATAT  250

seq1  CCCTAAAAATAATCACAATTTACTCCCCAGAAAAATGTCTGAGAGAGTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAAAAATAATCACAATTTACTCCCCAGAAAAATGTCTGAGAGAGTTA  300

seq1  TAATAGTGACTTTGCCAATTTTATTTAATAATAGGATATTTACTGAAACG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGTGACTTTGCCAATTTTATTTAATAATAGGATATTTACTGAAACG  350

seq1  ATTTGTTTTTCAAAGACAAACAAAATATTTTCTATTTGAATTGGAAATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTTTTTCAAAGACAAACAAAATATTTTCTATTTGAATTGGAAATGA  400

seq1  TTTTTGTAGTATGGAAAACATCTCAAAGTTAAGGTGTTTTAGCTTCTGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTAGTATGGAAAACATCTCAAAGTTAAGGTGTTTTAGCTTCTGTA  450

seq1  GTTTTTTACTAGTTAATAAGAGTACTAGGCTACCAAAGTTTATATGAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTACTAGTTAATAAGAGTACTAGGCTACCAAAGTTTATATGAGTT  500

seq1  AGTGTTCACTGCATTTGACCAATTGAGTGAATGCAACCATAAAGTTGATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTCACTGCATTTGACCAATTGAGTGAATGCAACCATAAAGTTGATA  550

seq1  AAATATGAACTATTCTTAGCAGCCCAGTGAACAGATCGGGCTATGTTTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGAACTATTCTTAGCAGCCCAGTGAACAGATCGGGCTATGTTTGT  600

seq1  TATTAATTACTTTGTGGTTGATTCTCTTAGATGTATTCACAAAAAATATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAATTACTTTGTGGTTGATTCTCTTAGATGTATTCACAAAAAATATC  650

seq1  ATAAATATGGGCAGAATAAAACTTTATAAGTCCTTTCCTTTGACTTAATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATATGGGCAGAATAAAACTTTATAAGTCCTTTCCTTTGACTTAATC  700

seq1  TTTTTAAGCTATTCTAGAAGTATGATGTCGCAGTTGAGATTTTGGGGACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAGCTATTCTAGAAGTATGATGTCGCAGTTGAGATTTTGGGGACA  750

seq1  ATCTTCGTGGAAGTGTGAAGTACATCGTCGTCTGGGCAGGGATCAATGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCGTGGAAGTGTGAAGTACATCGTCGTCTGGGCAGGGATCAATGTT  800

seq1  TTGCACCTGCACTAAACCTTCTAAATCTTTGTAGTTGTTTGCCATCTATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCACCTGCACTAAACCTTCTAAATCTTTGTAGTTGTTTGCCATCTATA  850

seq1  ATGAATAGAACAAGCCATCGCTCTGGAAAGCAACACCATGAAAGAATATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATAGAACAAGCCATCGCTCTGGAAAGCAACACCATGAAAGAATATT  900

seq1  GGCAAATAAAGCTCACTATGAAATTTGAATTTCAAACTGCACAAGAATTT  950
      ||||||||||||||||||||||||||||||||| |||||||| |||||||
seq2  GGCAAATAAAGCTCACTATGAAATTTGAATTTC-AACTGCAC-AGAATTT  948

seq1  TTGAGGAGAATTTATTTAATTTTATTTCCATGCTTCTAAGAAGCATGGTT  1000
      |||| |||||||||||||||||   |||||||||||| ||||||||||| 
seq2  TTGA-GAGAATTTATTTAATTT--ATTCCATGCTTCT-AGAAGCATGGT-  993

seq1  GTTTTCTTTTAAATCTGTTCTGCCCATTTGTTTATGTAACAGTATTGTCT  1050
        |||||||  ||||||||||||||||||||| |||| ||||||||||||
seq2  -GTTTCTTT--AATCTGTTCTGCCCATTTGTTAATGT-ACAGTATTGTCT  1039

seq1  GTGTTTACATGAGTCAAATAAAAATCTCCTGTTTGAAAACTGAAATAAAT  1100
      ||||||||||||||||||||||||||| |||||  ||| |||||||||  
seq2  GTGTTTACATGAGTCAAATAAAAATCT-CTGTTGAAAACCTGAAATAA--  1086

seq1  TGGAAGCCTTTTGGAGTT----TTAGCTG  1125
        | || |  ||||||||     ||||||
seq2  -CGCAGGC--TTGGAGTTAGCCGTAGCTG  1112