BAC Information

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BAC

Clone NameB6Ng01-302A10
Chromosome8 (Build37)
Map Location 8,921,176 - 8,922,287
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039836, Efnb2, 9430010O03Rik
Downstream geneTmem28
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-302A10.bB6Ng01-302A10.g
ACCGA096189GA096190
length1,1221,159
definitionB6Ng01-302A10.b B6Ng01-302A10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagccctggcactctctaccctggaaatggagatggagagctcag
acccataaactgtctgcacatcagagtgactttctgagtcataaacttta
aagtgggcttgccaagagtggagcccttccttgggctcaactcatttgct
aagatggctcttagagccctgggcagcattgtgttaacaagtgaagaggt
gtatagagcgaggcatgtaggtggcccactctctagaaacctccatgtat
ctagctctctgaagctctctaatacagcccttctgtgtctttatggaaac
ctcaccactatgtaggcatgattgacaaatcattagccatggatgaccaa
tctaatgttcaagtcatttttcttttgcatagttggtgggtaggctgaag
gatcaacccacaaatcatgacttagtcattcctatgacaaggctacatac
atcctgaagtgacctagtgatggctaggcaccagtcagctcattagcata
caaatagacattccctggggagaggccaaggattttaatagccacgggcc
tgggaaactgggaagaagaccaaatacacatgttacaacaatacaaagga
attaaaggtaagtttcataaatgtgaagtgtgacaacgtctttaataacc
tatgcatgtatctgttgtagattcctgtgggatactggctaacggctgag
gcaaaactcacctactctgcttggcaggaatgttagcaaataacaaccag
cacgtgtcctatgagtttggcttgggtcttaaataactatcagttgaggt
cctactcttggaaaagtagctaaacttgggtcagtcgtttgatgtgattt
ttttaagttgtctctctatccatggatgtcattggtcatcacaggaacga
agggaaaccagcccctacccatgcatcagtccagctctgatagagatgct
ggccccgaggccagcgacagactgagccatagccatgcatcagtccagct
ctgatggagatgctgggccccaaggccagcggacagactgagccatagtt
cctttctgggtgcaggctactgggccattcctaggtaaagttccattctt
gccaactctgttctccacctga

gaattcaagtgatttatgtgcctagtctgccttcaaggaagtggggcaca
agtcctcctctgttgtgatctagaaatagcgacttcctaacacagaaggg
gaccacagggcagtgagtttgcagctgagacacctggtaaacacaaccca
agccaggtgccggaagacaacatctacagtgataaatccacacatccctt
tcacagcacaggataagggtgacattttacctccgtcatcctcctccctc
agtgcgttcatatcaccgtgagcaaaccccaggtagagacaggcctctca
aagcctgggcctagttctcagaattctcaaagacaccaaaattaaagtct
aaagacggtgtcatagctaggagaagcctggagaagcagggcgaccaggt
ggaactcctaattcctgacaggattctgtaatagaaagatggcagataaa
gtctaaggaaaacaaagtaagctacagactttaattaacaacaatacatc
agggttcatttattgattagaataaactcatcactgtacaaggaaaggac
gccatggcaacgctactctatttttaattttcctaaagctctaaaatggc
ttttaaaaataaggtttagttttaaaataataaagacattacatgaaagc
actcacttctgtttagctttgggctcccacatgactgccagggataatgg
ctgtttccacaatttatgcgactggagatgccctgcccagagaattcact
cctaagaatgatcatatgtgctcactattttcataaagtctgagaagata
ctagtgtgtgctgggcctggaagatgtgtaagtcttaaataaatgatagt
tttgctaaataaaaacacagtgtgtaataaagagccaatttttcagactt
agtaacaataaaacaaaacttcagaaaatattaccagcaggccagaagaa
tagctcgctgaataaactacatatgctgagccctaatgactgagttagat
tccagactccactgtagcatagacacacacacatacacaccacacataac
acaccatgccacacgaaacacacacaacaagcacattaaccagacaacga
cagcaatgcaccacactacttgccaccacactgcttaaacccaccccagt
acactgacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_8921176_8922287
seq2: B6Ng01-302A10.b_47_1168

seq1  GAATTCAGCCCTGGCACTCTCTACCCTGGAAATGGAGATGGAGAGCTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCCCTGGCACTCTCTACCCTGGAAATGGAGATGGAGAGCTCAG  50

seq1  ACCCATAAACTGTCTGCACATCAGAGTGACTTTCTGAGTCATAAACTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATAAACTGTCTGCACATCAGAGTGACTTTCTGAGTCATAAACTTTA  100

seq1  AAGTGGGCTTGCCAAGAGTGGAGCCCTTCCTTGGGCTCAACTCATTTGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGGCTTGCCAAGAGTGGAGCCCTTCCTTGGGCTCAACTCATTTGCT  150

seq1  AAGATGGCTCTTAGAGCCCTGGGCAGCATTGTGTTAACAAGTGAAGAGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGGCTCTTAGAGCCCTGGGCAGCATTGTGTTAACAAGTGAAGAGGT  200

seq1  GTATAGAGCGAGGCATGTAGGTGGCCCACTCTCTAGAAACCTCCATGTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAGAGCGAGGCATGTAGGTGGCCCACTCTCTAGAAACCTCCATGTAT  250

seq1  CTAGCTCTCTGAAGCTCTCTAATACAGCCCTTCTGTGTCTTTATGGAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTCTCTGAAGCTCTCTAATACAGCCCTTCTGTGTCTTTATGGAAAC  300

seq1  CTCACCACTATGTAGGCATGATTGACAAATCATTAGCCATGGATGACCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCACTATGTAGGCATGATTGACAAATCATTAGCCATGGATGACCAA  350

seq1  TCTAATGTTCAAGTCATTTTTCTTTTGCATAGTTGGTGGGTAGGCTGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATGTTCAAGTCATTTTTCTTTTGCATAGTTGGTGGGTAGGCTGAAG  400

seq1  GATCAACCCACAAATCATGACTTAGTCATTCCTATGACAAGGCTACATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAACCCACAAATCATGACTTAGTCATTCCTATGACAAGGCTACATAC  450

seq1  ATCCTGAAGTGACCTAGTGATGGCTAGGCACCAGTCAGCTCATTAGCATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGAAGTGACCTAGTGATGGCTAGGCACCAGTCAGCTCATTAGCATA  500

seq1  CAAATAGACATTCCCTGGGGAGAGGCCAAGGATTTTAATAGCCACGGGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAGACATTCCCTGGGGAGAGGCCAAGGATTTTAATAGCCACGGGCC  550

seq1  TGGGAAACTGGGAAGAAGACCAAATACACATGTTACAACAATACAAAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAACTGGGAAGAAGACCAAATACACATGTTACAACAATACAAAGGA  600

seq1  ATTAAAGGTAAGTTTCATAAATGTGAAGTGTGACAACGTCTTTAATAACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAGGTAAGTTTCATAAATGTGAAGTGTGACAACGTCTTTAATAACC  650

seq1  TATGCATGTATCTGTTGTAGATTCCTGTGGGATACTGGCTAACGGCTGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCATGTATCTGTTGTAGATTCCTGTGGGATACTGGCTAACGGCTGAG  700

seq1  GCAAAACTCACCTACTCTGCTTGGCAGGAATGTTAGCAAATAACAACCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAACTCACCTACTCTGCTTGGCAGGAATGTTAGCAAATAACAACCAG  750

seq1  CACGTGTCCTATGAGTTTGGCTTGGGTCTTAAATAACTATCAGTTGAGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTGTCCTATGAGTTTGGCTTGGGTCTTAAATAACTATCAGTTGAGGT  800

seq1  CCTACTCTTGGAAAAGTAGCTAAACTTGGGTCAGTCGTTTGATGTGA-TT  849
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CCTACTCTTGGAAAAGTAGCTAAACTTGGGTCAGTCGTTTGATGTGATTT  850

seq1  TTTTAAGTTGTCTCTCTATCCATGGATGTCATTGGTCATCACAGGAACGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAGTTGTCTCTCTATCCATGGATGTCATTGGTCATCACAGGAACGA  900

seq1  AGGGAAACCAGCCCCTACCCATGCATCAGTCCAGCTCTGATAGAGATGCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAACCAGCCCCTACCCATGCATCAGTCCAGCTCTGATAGAGATGCT  950

seq1  GGCCCCGAGGCCAGCGACAGACTGAGCCATAGCCATGCATCAGTCCAGCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCCGAGGCCAGCGACAGACTGAGCCATAGCCATGCATCAGTCCAGCT  1000

seq1  CTGATGGAGATGCT-GGCCCCAAGGCCAGC-GACAGACTGAGCCATAGGT  1047
      |||||||||||||| ||||||||||||||| ||||||||||||||||| |
seq2  CTGATGGAGATGCTGGGCCCCAAGGCCAGCGGACAGACTGAGCCATAGTT  1050

seq1  CCTTCCT-GGTGCAGCCTACCTGGGCATT-CTA-GTAAAG-TCCAT--CT  1091
      |||| || ||||||| ||||  || |||| ||| |||||| |||||   |
seq2  CCTTTCTGGGTGCAGGCTACTGGGCCATTCCTAGGTAAAGTTCCATTCTT  1100

seq1  GCAAACTCTGTTCT-CACCTGA  1112
      || ||||||||||| |||||||
seq2  GCCAACTCTGTTCTCCACCTGA  1122


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