BAC Information

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BAC

Clone NameB6Ng01-302G12
Chromosome8 (Build37)13 (Build37)
Map Location 25,129,633 - 25,130,57488,467,191 - 88,467,906
singlet/doubletsingletsinglet
Overlap geneZmat4
Upstream geneAnk1, Nkx6-3, Agpat6, Gins4, Golga7, Sfrp1, LOC100040931
Downstream gene1810011O10Rik, Indol1, Indo, Adam18, Adam3, Adam5, Adam32, Adam9, Tm2d2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-302G12.bB6Ng01-302G12.g
ACCGA096461GA096462
length951997
definitionB6Ng01-302G12.b B6Ng01-302G12.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(25,129,633 - 25,130,574)(88,467,191 - 88,467,906)
sequence
gaattctggactccccaccctatcgcatgtctttcctttcgctattgcag
ggtctcctatagctttatggtaagtcttggtatctaagaatgtaaattgt
ctgcctttgcattttatttcaaagccatttgcattatccttgatcctttg
tgtttttacgtacacttttagaataaaattttcaattttcttgaaaacat
ttaacatctgctcccatccatatcctttggcagagcctctgattctttct
gtaaggtttcataggtctgtctgtggaaatctcacacatatctctataag
tttcttcctaaggatttgataggaagaatccaaacaaacaaactaactaa
aacaaaacaaaaaaggggcaaatgatttatgccattttgagaccagaata
taaacaaaatcaatttttaagtaaatgaaaaactcaattataaacagtaa
tgttcctaagtctgtatccaattgctttgttaaatttacttaacagtcca
attccatcagcaaataattggggattttctgtgcgagaaccatcagcagc
aaacatagggagttcatcggctcctctcatctttggctacctgcctggtc
acatgggagatccatctctgcaatgcaggttcaggtggctccatggttac
tcacatccctcagaccttcaagtaactatggaagtccaagtgagacactt
gcttgtctctcacaatctgctaacattcttcttacaattagacgatgagt
ctcatcaaatgcttatactttactggtttgatcataatatctccactttc
aattataaactattgaactgtagccagattatatttttcaagtatcaacc
caacatttcaccaaaagcctcatttttctttggattattttgatttctaa
gtattcatgggaatgcatgtctgaagaacattttcaatattgttccatcc
c
gaattcagatgtatacaggcttttgttatgtaaaaccttgctccctaatt
atccctggttggctaataaagatgcctatttcctgggatgggcaaaataa
aagtctcttcagctgcctttcctgggcttggagtctgaggtagggaccac
cacgaggggaggccgggaggaggggggaggaaatattgaaattatcccat
gcatcttatcaatatcaccatggaatgaggctgatctttgataacaatcc
aaacaatggaaagcccacatatacatggaagctgaacaatgccctactca
aagataacttggtcaaggaagaaataaggaaagaaataaactacttttta
gaatttaatgaaaatgaagacacaccataccaaaacttaatggacacaat
gaaagcagtgctaagaggaaaatgtaatgctctaagtgcctgcaaaaaga
aactgtagagaacatacactagcagcttgacagaacacctgaaagctaga
gaacaaaaataaacaaattcacccaagagaagtaggtagcagaaaataat
caaactcagggctgaaatcaaccatgtagaaacaaaaagaactacacaaa
aattcaaaaaacaaaaaataaaaacaaaacaaacaaacaacaagaaaaaa
aaaaaaaaaaaaacaggagctggctctttgagaaaattaacaagataaat
aaacccttagccagactaaccagagaggacagagacagtatccaaattaa
tgaaatcagaaatgaaaagagactctttatatatatataatctttttaat
ttttttttaattaggtattttcctcattttacattttccaatgctatccc
aaaagtcccgcatacccaccccaccactcccctactcaccctctccccct
ttttggccctggcgttcccctgtactggggcattataacatcttaatgaa
atgattttaatgactttaattgttaattggtaaacttgcattgtgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_25129633_25130574
seq2: B6Ng01-302G12.b_45_995

seq1  GAATTCTGGACTCCCCACCCTAGCGCATGTCTTTCCTTACGCTATTGCAG  50
      |||||||||||||||||||||| ||||||||||||||| |||||||||||
seq2  GAATTCTGGACTCCCCACCCTATCGCATGTCTTTCCTTTCGCTATTGCAG  50

seq1  TGTCTCCTATAGCTTTATGGTAAGTCTTGGTATCTAAGAGTGTAAATTGT  100
       |||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GGTCTCCTATAGCTTTATGGTAAGTCTTGGTATCTAAGAATGTAAATTGT  100

seq1  CTGCCTTTGCATTTTATTTCAAAACCATTTTCATTATCCTTGATCCTTTG  150
      ||||||||||||||||||||||| |||||| |||||||||||||||||||
seq2  CTGCCTTTGCATTTTATTTCAAAGCCATTTGCATTATCCTTGATCCTTTG  150

seq1  TGTTTTTACATACACTTTTAGAATCAAATTTTCAATTTTCTTGAAAACAT  200
      ||||||||| |||||||||||||| |||||||||||||||||||||||||
seq2  TGTTTTTACGTACACTTTTAGAATAAAATTTTCAATTTTCTTGAAAACAT  200

seq1  TTAACATCTGCTCCCATCCATATCCTTTGGCAGAGCCTCTGATTCTTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACATCTGCTCCCATCCATATCCTTTGGCAGAGCCTCTGATTCTTTCT  250

seq1  GTAAGGTTTCATAGGTCTGTCTGTGGAAATCTCACACATATCTCTTTAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GTAAGGTTTCATAGGTCTGTCTGTGGAAATCTCACACATATCTCTATAAG  300

seq1  TTTCTTCCTAAGGATTTGATAGGAAGAATCAAAACAAACAAACTAACTAA  350
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TTTCTTCCTAAGGATTTGATAGGAAGAATCCAAACAAACAAACTAACTAA  350

seq1  AACAAAACAAAAAAGGGGCAAATGATTTATGCCATTTTGAGACCAGAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAACAAAAAAGGGGCAAATGATTTATGCCATTTTGAGACCAGAATA  400

seq1  TAAACAAGATCAATTTTTAAGTAAATGAAAAACTCAGTTATAAACAGTAA  450
      ||||||| |||||||||||||||||||||||||||| |||||||||||||
seq2  TAAACAAAATCAATTTTTAAGTAAATGAAAAACTCAATTATAAACAGTAA  450

seq1  TGTTCCTAAGTCTGTATCCAATTGCTTTGTTAAATTTACTTAACAGTCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCTAAGTCTGTATCCAATTGCTTTGTTAAATTTACTTAACAGTCCA  500

seq1  ATTCCATCAGCAAATAATTGGGGATTTTCTGTGCGAGAACCATCAGCAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCATCAGCAAATAATTGGGGATTTTCTGTGCGAGAACCATCAGCAGC  550

seq1  AAACATAGGGAGTTCATCGGCTCCTCTCATCTTTGGCTACCTGCCTGGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATAGGGAGTTCATCGGCTCCTCTCATCTTTGGCTACCTGCCTGGTC  600

seq1  ACAGTGGAGATCCATCTCTGCAATGCAGGTTCAGGTGGCTCCATGGTTAC  650
      |||  |||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGGAGATCCATCTCTGCAATGCAGGTTCAGGTGGCTCCATGGTTAC  650

seq1  TCACATCCCTCAGACCTTCAAGTAACTATGGAAGTCCAAGTGAGACACTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATCCCTCAGACCTTCAAGTAACTATGGAAGTCCAAGTGAGACACTT  700

seq1  GCTTGTCTCTCACAATCTGCTAACATTCTTCTTACAATTAGACGATGAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTCTCTCACAATCTGCTAACATTCTTCTTACAATTAGACGATGAGT  750

seq1  TTCATCAAATGCTTTTACTTTACTGGTTTGATCATAATATCTCCACTTTC  800
       ||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CTCATCAAATGCTTATACTTTACTGGTTTGATCATAATATCTCCACTTTC  800

seq1  AATTATAAACTATTGAACTGTAGCC-GATTATA-TTTTCAAGTATCAACC  848
      ||||||||||||||||||||||||| ||||||| ||||||||||||||||
seq2  AATTATAAACTATTGAACTGTAGCCAGATTATATTTTTCAAGTATCAACC  850

seq1  CAACATTTCACCAAAA-CCTCATTTTTC-TTGGATTATTTT-ATTTCTAT  895
      |||||||||||||||| ||||||||||| |||||||||||| ||||||| 
seq2  CAACATTTCACCAAAAGCCTCATTTTTCTTTGGATTATTTTGATTTCTAA  900

seq1  GTATTCAT-GGAATGAATGTCTGAA-AACATTTT-AATATTTTTCC-TCC  941
      |||||||| |||||| ||||||||| |||||||| |||||| |||| |||
seq2  GTATTCATGGGAATGCATGTCTGAAGAACATTTTCAATATTGTTCCATCC  950

seq1  C  942
      |
seq2  C  951

seq1: chr13_88467191_88467906
seq2: B6Ng01-302G12.g_339_1062

seq1  CATGGAAGCTGAACAATGCCCTACTCAAAGATAACTTGGTCAAGGAAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAAGCTGAACAATGCCCTACTCAAAGATAACTTGGTCAAGGAAGAA  50

seq1  ATAAGGAAAGAAATAAACTACTTTTTAGAATTTAATGAAAATGAAGACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGAAAGAAATAAACTACTTTTTAGAATTTAATGAAAATGAAGACAC  100

seq1  ACCATACCAAAACTTAATGGACACAATGAAAGCAGTGCTAAGAGGAAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATACCAAAACTTAATGGACACAATGAAAGCAGTGCTAAGAGGAAAAT  150

seq1  GTAATGCTCTAAGTGCCTGCAAAAAGAAACTGTAGAGAACATACACTAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATGCTCTAAGTGCCTGCAAAAAGAAACTGTAGAGAACATACACTAGC  200

seq1  AGCTTGACAGAACACCTGAAAGCTAGAGAACAAAAATAAACAAATTCACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGACAGAACACCTGAAAGCTAGAGAACAAAAATAAACAAATTCACC  250

seq1  CAAGAGAAGTAGGTAGCAGAAAATAATCAAACTCAGGGCTGAAATCAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGAAGTAGGTAGCAGAAAATAATCAAACTCAGGGCTGAAATCAACC  300

seq1  ATGTAGAAACAAAAAGAACTACACAAAAATTCAAAAAACAAAAAATAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGAAACAAAAAGAACTACACAAAAATTCAAAAAACAAAAAATAAAA  350

seq1  ACAAAACAAACAAACAACAAGAAAAAAAAAAAAAAAAAAAACAGGAGCTG  400
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ACAAAACAAACAAACAACAAG-AAAAAAAAAAAAAAAAAAACAGGAGCTG  399

seq1  GCTCTTTGAGAAAATTAACAAGATAAATAAACCCTTAGCCAGACTAACCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTTGAGAAAATTAACAAGATAAATAAACCCTTAGCCAGACTAACCA  449

seq1  GAGAGGACAGAGACAGTATCCAAATTAATGAAATCAGAAATGAAAAGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGACAGAGACAGTATCCAAATTAATGAAATCAGAAATGAAAAGAGA  499

seq1  CTCTTTATATATATATAATCTTTTTAA-TTTTTTTTAATTAGGTATTTTC  549
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CTCTTTATATATATATAATCTTTTTAATTTTTTTTTAATTAGGTATTTTC  549

seq1  CTCA-TTTACA-TTTCCAATGCTATCCCAAAAGTCCCGCATACCCACCCC  597
      |||| |||||| ||||||||||||||||||||||||||||||||||||||
seq2  CTCATTTTACATTTTCCAATGCTATCCCAAAAGTCCCGCATACCCACCCC  599

seq1  ACCACTCCCCTACTCACCCTCTCCCCCTTTTTGGCCCTGGCGTTCCCCTG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTCCCCTACTCACCCTCTCCCCCTTTTTGGCCCTGGCGTTCCCCTG  649

seq1  TACTGGGGCA-TATAACATCTTAATGAAATGATTTT-ATGACTTTAAT--  693
      |||||||||| ||||||||||||||||||||||||| |||||||||||  
seq2  TACTGGGGCATTATAACATCTTAATGAAATGATTTTAATGACTTTAATTG  699

seq1  GTAAATGGTAAAC-TGCA-TGTGTA  716
       ||| |||||||| |||| ||||||
seq2  TTAATTGGTAAACTTGCATTGTGTA  724