BAC Information

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BAC

Clone NameB6Ng01-302H12
Chromosome8 (Build37)
Map Location 25,129,633 - 25,130,631
singlet/doubletsinglet
Overlap geneZmat4
Upstream geneAnk1, Nkx6-3, Agpat6, Gins4, Golga7, Sfrp1, LOC100040931
Downstream gene1810011O10Rik, Indol1, Indo, Adam18, Adam3, Adam5, Adam32, Adam9, Tm2d2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-302H12.bB6Ng01-302H12.g
ACCGA096507GA096508
length992179
definitionB6Ng01-302H12.b B6Ng01-302H12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctggactccccaccctagcgcatgtctttccttacgctattgcag
tgtctcctatagctttatggtaagtcttggtatctaagagtgtaaattgt
ctgcctttgcattttatttcaaaaccattttcattatccttgatcctttg
tgtttttacatacacttttagaatcaaattttcaattttcttgaaaacat
ttaacatctgctcccatccatatcctttggcagagcctctgattctttct
gtaaggtttcataggtctgtctgtggaaatctcacacatatctctttaag
tttcttcctaaggatttgataggaagaatcaaaacaaacaaactaactaa
aacaaaacaaaaaaggggcaaatgatttatgccattttgagaccagaata
taaacaagatcaatttttaagtaaatgaaaaactcagttataaacagtaa
tgttcctaagtctgtatccaattgctttgttaaatttacttaacagtcca
attccatcagcaaataattggggattttctgtgcgagaaccatcagcagc
aaacatagggagttcatcggctcctctcatctttggctacctgcctggtc
acagtggagatccatctctgcaatgcaggttcaggtggctccatggttac
tcacatccctcagaccttcaagtaactatggaagtccaagtgagacactt
gcttgtctctcacaatctgctaacattcttcttacaattagacgatgagt
ttcatcaaatgcttttactttactggtttgatcataatatctccactttc
aattataaactattgaactgtagccgattatattttcaagtatcaaccca
acatttcaccaaaacctcatttttcttggattattttatttctatgtatt
catggatgatgtctgatacattttatatttttctccccactctctctctc
tctctctctctctctctctctctgtgtgtgtgtgtgtgtgtg
agatgtatacaggcttttgttatgtaaaaccttgctccctaattatccct
ggttggctaataaagatgcctatatcctgggatgggcagaagagaagtca
gcagagcttcagttcctgggcttggagtctgaggtagggaccaccacaag
gggaggccgggaggaggggggaggaagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_25129633_25130631
seq2: B6Ng01-302H12.b_48_1039

seq1  GAATTCTGGACTCCCCACCCTAGCGCATGTCTTTCCTTACGCTATTGCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGACTCCCCACCCTAGCGCATGTCTTTCCTTACGCTATTGCAG  50

seq1  TGTCTCCTATAGCTTTATGGTAAGTCTTGGTATCTAAGAGTGTAAATTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCCTATAGCTTTATGGTAAGTCTTGGTATCTAAGAGTGTAAATTGT  100

seq1  CTGCCTTTGCATTTTATTTCAAAACCATTTTCATTATCCTTGATCCTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTTTGCATTTTATTTCAAAACCATTTTCATTATCCTTGATCCTTTG  150

seq1  TGTTTTTACATACACTTTTAGAATCAAATTTTCAATTTTCTTGAAAACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTACATACACTTTTAGAATCAAATTTTCAATTTTCTTGAAAACAT  200

seq1  TTAACATCTGCTCCCATCCATATCCTTTGGCAGAGCCTCTGATTCTTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACATCTGCTCCCATCCATATCCTTTGGCAGAGCCTCTGATTCTTTCT  250

seq1  GTAAGGTTTCATAGGTCTGTCTGTGGAAATCTCACACATATCTCTTTAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGGTTTCATAGGTCTGTCTGTGGAAATCTCACACATATCTCTTTAAG  300

seq1  TTTCTTCCTAAGGATTTGATAGGAAGAATCAAAACAAACAAACTAACTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCCTAAGGATTTGATAGGAAGAATCAAAACAAACAAACTAACTAA  350

seq1  AACAAAACAAAAAAGGGGCAAATGATTTATGCCATTTTGAGACCAGAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAACAAAAAAGGGGCAAATGATTTATGCCATTTTGAGACCAGAATA  400

seq1  TAAACAAGATCAATTTTTAAGTAAATGAAAAACTCAGTTATAAACAGTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAAGATCAATTTTTAAGTAAATGAAAAACTCAGTTATAAACAGTAA  450

seq1  TGTTCCTAAGTCTGTATCCAATTGCTTTGTTAAATTTACTTAACAGTCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCTAAGTCTGTATCCAATTGCTTTGTTAAATTTACTTAACAGTCCA  500

seq1  ATTCCATCAGCAAATAATTGGGGATTTTCTGTGCGAGAACCATCAGCAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCATCAGCAAATAATTGGGGATTTTCTGTGCGAGAACCATCAGCAGC  550

seq1  AAACATAGGGAGTTCATCGGCTCCTCTCATCTTTGGCTACCTGCCTGGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATAGGGAGTTCATCGGCTCCTCTCATCTTTGGCTACCTGCCTGGTC  600

seq1  ACAGTGGAGATCCATCTCTGCAATGCAGGTTCAGGTGGCTCCATGGTTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGGAGATCCATCTCTGCAATGCAGGTTCAGGTGGCTCCATGGTTAC  650

seq1  TCACATCCCTCAGACCTTCAAGTAACTATGGAAGTCCAAGTGAGACACTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATCCCTCAGACCTTCAAGTAACTATGGAAGTCCAAGTGAGACACTT  700

seq1  GCTTGTCTCTCACAATCTGCTAACATTCTTCTTACAATTAGACGATGAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTCTCTCACAATCTGCTAACATTCTTCTTACAATTAGACGATGAGT  750

seq1  TTCATCAAATGCTTTTACTTTACTGGTTTGATCATAATATCTCCACTTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCAAATGCTTTTACTTTACTGGTTTGATCATAATATCTCCACTTTC  800

seq1  AATTATAAACTATTGAACTGTAGCCGATTATATTTTCAAGTATCAACCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATAAACTATTGAACTGTAGCCGATTATATTTTCAAGTATCAACCCA  850

seq1  ACATTTCACCAAAACCTCATTTTTCTTGGATTATTTTATTTCTATGTATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTCACCAAAACCTCATTTTTCTTGGATTATTTTATTTCTATGTATT  900

seq1  CATGGAATGAATGTCTGAAAACATTTTAATATTTTTCCTCCCCCACCTCT  950
      ||||| ||| ||||||| | ||||||| |||||||| ||||||   ||||
seq2  CATGG-ATG-ATGTCTG-ATACATTTT-ATATTTTT-CTCCCC--ACTCT  943

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTG  999
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTG  992