BAC Information

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BAC

Clone NameB6Ng01-303G11
Chromosome8 (Build37)
Map Location 45,151,100 - 45,152,222
singlet/doubletsinglet
Overlap genenone
Upstream geneTriml1, LOC622082, EG622117, LOC100039417, Zfp42, Adam26b, Adam26a, EG384813, Adam34, EG384814, LOC100039472, LOC547011, LOC622263
Downstream geneLOC100039508, Fat1, LOC100039673
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-303G11.bB6Ng01-303G11.g
ACCGA097212GA097213
length1,1701,119
definitionB6Ng01-303G11.b B6Ng01-303G11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatcttccagaacttttatcatgaatgggtgttgaatcttgt
caaatgctttttctgcatctaacgagatgatcatgtggtttttgtctttg
agtttgtttatataatggattacattgatggattttcgtatattaaacca
tccctgcatccctggaataaaacctacttggtcaggatggatgattgctt
taatgtgttcttggattcggttagcgagaattttattaagaatttttgca
tcgatgttcataagagaaattggtctgaagttctctatctttgttggatc
tttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttgg
gtagaataccttctacttctatcttgtgaaaaagtttgtgcagaactgga
gttagatcttctttgaaggtctgatagaactctgcactaaacccgtctgg
tcctgggctttttttggctgggagactattaataactgcttctatttctt
taggggatatgggactgtttagaaggtcaacttgatcctgattcaacttt
ggtacctggtatctgtccagaaatttgtccattccgtccaggttttccag
ctttgttgagtatagccttttgtagaaggatctgatggtgttttggattt
cttcaggatctgttgttatgtctcccttttcagttctgatcctgttaatt
aggattttgtccctgtgccctttagtgagtctagctaagggtttatctat
cttgttgattttctcaaagaaccaactcctcgtttggttaattctttgaa
tagttcttcttgtttccacttggttgatttcacccctgagtttgattatt
tcctgccgtctactcctcttgggtgaatttgcttccttttttttctagag
cttttagatgtgttgtcaagctgctagtatgtgctctctcccgttttttc
ttgaaggcactcatagcttatgagttccctctagaaatgcttcatggtgt
cccaaaggttggggtacgttgttggcttcattttcattaaactcctaaaa
gtctttaaattccttttctttaattctcttgaacagtatcaattggagaa
gagtttggtccagatccatagtgagtgccttcggattattgtatgcgaga
ctcagccctctagtggacta
aggattcctgtagtagctgactgggtgttctccatcacacaataaaagtg
aacattagctacctggaagccataacacataaagaagctttcattaaata
gtctactaaatctatattggctttttgctttgatcttataaatttttatt
gttatatagagaataaatcatttgaatgggaagacatcttatcttttctt
cagaaatattggtactcacaaggaaatatagccaatttcagaaagaaaat
ttccatttacatatgtcagaggattgaaatatttttaaaagtttatgcta
tgatttacaaggcaaattataactatatttactgactaccaacaaaactc
aagatccatttgcttcaaagttaagtatgctatcaatccaaaggaaactt
ccaatgaaatgttctgtacacaaaacaaatttattttgggtctaccgtac
atacccccttttggcaagttatgtgttaggatttgtatgccatattcaat
taacataaactaattatgcaaatatgtcagtgagtaagaaattctttctg
cagggcaatgcctataatctcaggactcaaaaagctgaatcaggaagacc
atgagatttgaagctggatcaaataaagctttaggcagacctaggcaata
cggtgagaccctgtctaaaaatattgttatttctgattcttatagaactt
ggagttttggagtaggtaaaaagattcaacagatgtatgaaaatatgtga
ctgaagaacagttactatctgggaatctatagaggtggaaggataaggga
ctacctcctgagtaaacagtatttaagtttggaggatatgccaatgctac
agtagtagcactcaagattttggaggaaatgaacaattatctaagtggat
ttcagactcactttataggggtagttcatgcctgatagttaaaacctaac
cagctacttatggcgagtgatatttatggaccctagagagacctactact
actatcaggtctaaccagtggaatttctattgtgcattaataatgctcat
ttttcccatccctcattcaagaggcttcctttttaagccatcaagaccat
taccgaaatctacactggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_45151100_45152222
seq2: B6Ng01-303G11.g_79_1197

seq1  AGGATTCCTGTAGTAGCTGACTGGGTGTTCTCCATCACACAATAAAAGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTCCTGTAGTAGCTGACTGGGTGTTCTCCATCACACAATAAAAGTG  50

seq1  AACATTAGCTACCTGGAAGCCATAACACATAAAGAAGCTTTCATTAAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTAGCTACCTGGAAGCCATAACACATAAAGAAGCTTTCATTAAATA  100

seq1  GTCTACTAAATCTATATTGGCTTTTTGCTTTGATCTTATAAATTTTTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTACTAAATCTATATTGGCTTTTTGCTTTGATCTTATAAATTTTTATT  150

seq1  GTTATATAGAGAATAAATCATTTGAATGGGAAGACATCTTATCTTTTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATATAGAGAATAAATCATTTGAATGGGAAGACATCTTATCTTTTCTT  200

seq1  CAGAAATATTGGTACTCACAAGGAAATATAGCCAATTTCAGAAAGAAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATATTGGTACTCACAAGGAAATATAGCCAATTTCAGAAAGAAAAT  250

seq1  TTCCATTTACATATGTCAGAGGATTGAAATATTTTTAAAAGTTTATGCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTTACATATGTCAGAGGATTGAAATATTTTTAAAAGTTTATGCTA  300

seq1  TGATTTACAAGGCAAATTATAACTATATTTACTGACTACCAACAAAACTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTACAAGGCAAATTATAACTATATTTACTGACTACCAACAAAACTC  350

seq1  AAGATCCATTTGCTTCAAAGTTAAGTATGCTATCAATCCAAAGGAAACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCCATTTGCTTCAAAGTTAAGTATGCTATCAATCCAAAGGAAACTT  400

seq1  CCAATGAAATGTTCTGTACACAAAACAAATTTATTTTGGGTCTACCGTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGAAATGTTCTGTACACAAAACAAATTTATTTTGGGTCTACCGTAC  450

seq1  ATACCCCCTTTTGGCAAGTTATGTGTTAGGATTTGTATGCCATATTCAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCCCCTTTTGGCAAGTTATGTGTTAGGATTTGTATGCCATATTCAAT  500

seq1  TAACATAAACTAATTATGCAAATATGTCAGTGAGTAAGAAATTCTTTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATAAACTAATTATGCAAATATGTCAGTGAGTAAGAAATTCTTTCTG  550

seq1  CAGGGCAATGCCTATAATCTCAGGACTCAAAAAGCTGAATCAGGAAGACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCAATGCCTATAATCTCAGGACTCAAAAAGCTGAATCAGGAAGACC  600

seq1  ATGAGATTTGAAGCTGGATCAAATAAAGCTTTAGGCAGACCTAGGCAATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGATTTGAAGCTGGATCAAATAAAGCTTTAGGCAGACCTAGGCAATA  650

seq1  CGGTGAGACCCTGTCTAAAAATATTGTTATTTCTGATTCTTATAGAACTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTGAGACCCTGTCTAAAAATATTGTTATTTCTGATTCTTATAGAACTT  700

seq1  GGAGTTTTGGAGTAGGTAAAAAGATTCAACAGATGTATGAAAATATGTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTTTGGAGTAGGTAAAAAGATTCAACAGATGTATGAAAATATGTGA  750

seq1  CTGAAGAACAGTTACTATCTGGGAATCTATAGAGGTGGAAGGATAAGGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGAACAGTTACTATCTGGGAATCTATAGAGGTGGAAGGATAAGGGA  800

seq1  CTACCTCCTGAGTAAACAGTATTTAAGTTTGGAGGATATGCCAATGCTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTCCTGAGTAAACAGTATTTAAGTTTGGAGGATATGCCAATGCTAC  850

seq1  AGTAGTAGCACTCAAGATTTTGGAGGAAATGAACAATTATCTAAGTGGAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTAGCACTCAAGATTTTGGAGGAAATGAACAATTATCTAAGTGGAT  900

seq1  TTCAGACTCACTTAATAGGGGTAGTTCATGCCTGATAGTTAAAACCTAAC  950
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TTCAGACTCACTTTATAGGGGTAGTTCATGCCTGATAGTTAAAACCTAAC  950

seq1  CAGCTACTTATGGCGAGTGATA-TTATGGACCCTAGAAGAGGACCTACTA  999
      |||||||||||||||||||||| ||||||||||||| ||| |||||||||
seq2  CAGCTACTTATGGCGAGTGATATTTATGGACCCTAG-AGA-GACCTACTA  998

seq1  CTACTATCAGTTCCTAAACCAGTGGAATTTCTA-TGTGCATTATAAATGC  1048
      |||||||||| ||   ||||||||||||||||| |||||||||  |||||
seq2  CTACTATCAGGTC--TAACCAGTGGAATTTCTATTGTGCATTAATAATGC  1046

seq1  TCATTTTTCCCCATCCCTCATCAAAGAAGCTT-CTTTTATAGCAATCAAA  1097
      |||||||| ||||||||||||  |||| |||| |||||  ||| ||| ||
seq2  TCATTTTT-CCCATCCCTCATTCAAGAGGCTTCCTTTTTAAGCCATC-AA  1094

seq1  GACCATTACAGAAATCTACAACTGGT  1123
      ||||||||| ||||||||| ||||||
seq2  GACCATTACCGAAATCTAC-ACTGGT  1119