BAC Information

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BAC

Clone NameB6Ng01-303L15
Chromosome8 (Build37)
Map Location 12,163,551 - 12,273,641
singlet/doubletdoublet
Overlap genenone
Upstream geneCol4a1, Col4a2, Rab20, 0710008K08Rik, Cars2, Ing1, Ankrd10, 1700016D06Rik, EG665271, LOC665363, LOC624710, LOC665373, Arhgef7, 1700018L24Rik, LOC100040155
Downstream geneLOC100040175, EG434280, EG434279, Sox1, 1700094C09Rik, Tubgcp3, Atp11a, LOC100040229, Mcf2l, F7, F10, Proz, Pcid2, Cul4a, Lamp1, Grtp1, Adprhl1, Dcun1d2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-303L15.bB6Ng01-303L15.g
ACCGA097457GA097458
length9951,029
definitionB6Ng01-303L15.b B6Ng01-303L15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,273,106 - 12,273,641)(12,163,551 - 12,164,576)
sequence
gaattctttccatgcatgctgaggtgagccatatcctatggaagagcaga
gggaccaagtaatcatggtgccttgatgaagggtctctatctcaaaactt
tccacagtcccagcgcccacatggtggcttgcaaccatctgtaatgagac
ttgatgtcctcttctggtgtgcagacatatagaaagacagagcacttata
tacataaacagaccaaaccaaaccaaacttccaacagaacaaaagcaaac
aacctgctcctgccccagaacgcaaactcaagtcagtggaagggaaggag
agtccggaaacagaccaacattcttagttaaaggtgaccctcaaccaggg
tgcccaggcaagtcaaagggaaagaaccatcttttagaaaatagttagaa
acagactgaaacgtgtcagactggttgagatcacacgctaacaaatgcag
cagactttgtctctcaccacagagcaacctgataaaagacctcggcgaaa
ggaagaggtggatcgctcttgagagaaaactggggcatcaacagttttca
ctctctgttagctgacaggctcttaggtgtggcatggaaaatgcaatcta
caaaaggaaaaagtaaataaagtagaaaggacagcaccaaaaaactcaat
ccaggttacaaaaacaggattttcaaatgatatacctgttaagggccttg
tctctgaatatgtaaagtgttcttgcaattcaggaattaaaggaccaata
atccagttttaaatgatcgaaggatttgagtaggaattcctcaaaaacat
actcaaaggacaagtacacgaagatgcaacaatacgcagaacatcattag
tcaacagggaaattcaagtcaaatctgcaattgggtgagacttcaatcca
ttggatgcagcagagtttaaaggaagtcctgatgcagatgagaaaatctg
tagcctggtttcttggctgatgggaattccagatgagtcggctgc
gaattccttcccgtgatttctatgtaaattggacgcctctcacaattact
gtaatatgcgtgcaattccacttattatttcttttaacgccgaaactttt
atcacttaactcactggacagaatatttgagccatttgcaatcattagaa
cagttttgtttggtcaaacccttgtgggattatattctgggaaagacgga
gtgaattatattcattgcaagaaaacagcaattttaaatatataaggggc
accaggaaaatgttcattttcctgcaaattcaatattatattttactttt
tcgttttctttttcttttctttctctctttctttctttctttcttttttt
ttttttttttttttttttttacagcagggtaaggctttttatctttaagc
aatttataaaacccagcatggacagggagtgaggctgccatagaagacca
cactgatacataaatagttactctgtagacagggagaagcgagatcgcag
ggatttgaggtaatagcttttcactttgggaggttttccttgtgatccta
gatggagggcatggagtgtttgccgatttttcctaggttccaacatggaa
catttatcacgttacccctctctggtgctagtgccctcacctgccctcca
cctcctttcccaggaagccggggccagctgagtgatgatcccacccaaac
accctgctccccttgcagacttccagaccacatcaaatttcgttcaaata
gattagagaacaaaagcaggaaatgaagacacattgttgccttttatgca
gattcccccccccccccccacgtgcagaagggtgttcaggcatctccctt
gtagcttagatgctgcctgctggaggctccttccctgtggctggtcactg
gaaattttagcaggctgagaagaaaggctccatccacatcagctctgtga
ctatgcacctgacatgtaaggttaaaggtgtaggtacatttgtcttcaca
cactactgggcagcttgataatggtgtag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_12273106_12273641
seq2: B6Ng01-303L15.b_47_582 (reverse)

seq1  GCCCCAGTTTTCTCTCAAGAGCGATCCACCTCTTCCTTTCGCCGAGGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCAGTTTTCTCTCAAGAGCGATCCACCTCTTCCTTTCGCCGAGGTCT  50

seq1  TTTATCAGGTTGCTCTGTGGTGAGAGACAAAGTCTGCTGCATTTGTTAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCAGGTTGCTCTGTGGTGAGAGACAAAGTCTGCTGCATTTGTTAGC  100

seq1  GTGTGATCTCAACCAGTCTGACACGTTTCAGTCTGTTTCTAACTATTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGATCTCAACCAGTCTGACACGTTTCAGTCTGTTTCTAACTATTTTC  150

seq1  TAAAAGATGGTTCTTTCCCTTTGACTTGCCTGGGCACCCTGGTTGAGGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGATGGTTCTTTCCCTTTGACTTGCCTGGGCACCCTGGTTGAGGGT  200

seq1  CACCTTTAACTAAGAATGTTGGTCTGTTTCCGGACTCTCCTTCCCTTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTTAACTAAGAATGTTGGTCTGTTTCCGGACTCTCCTTCCCTTCCA  250

seq1  CTGACTTGAGTTTGCGTTCTGGGGCAGGAGCAGGTTGTTTGCTTTTGTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTTGAGTTTGCGTTCTGGGGCAGGAGCAGGTTGTTTGCTTTTGTTC  300

seq1  TGTTGGAAGTTTGGTTTGGTTTGGTCTGTTTATGTATATAAGTGCTCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGAAGTTTGGTTTGGTTTGGTCTGTTTATGTATATAAGTGCTCTGT  350

seq1  CTTTCTATATGTCTGCACACCAGAAGAGGACATCAAGTCTCATTACAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTATATGTCTGCACACCAGAAGAGGACATCAAGTCTCATTACAGAT  400

seq1  GGTTGCAAGCCACCATGTGGGCGCTGGGACTGTGGAAAGTTTTGAGATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGCAAGCCACCATGTGGGCGCTGGGACTGTGGAAAGTTTTGAGATAG  450

seq1  AGACCCTTCATCAAGGCACCATGATTACTTGGTCCCTCTGCTCTTCCATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCTTCATCAAGGCACCATGATTACTTGGTCCCTCTGCTCTTCCATA  500

seq1  GGATATGGCTCACCTCAGCATGCATGGAAAGAATTC  536
      ||||||||||||||||||||||||||||||||||||
seq2  GGATATGGCTCACCTCAGCATGCATGGAAAGAATTC  536

seq1: chr8_12163551_12164576
seq2: B6Ng01-303L15.g_65_1093

seq1  GAATTCCTTCCCGTGATTTCTATGTAAATTGGACGCCTCTCACAATTACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCCCGTGATTTCTATGTAAATTGGACGCCTCTCACAATTACT  50

seq1  GTAATATGCGTGCAATTCCACTTATTATTTCTTTTAACGCCGAAACTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATATGCGTGCAATTCCACTTATTATTTCTTTTAACGCCGAAACTTTT  100

seq1  ATCACTTAACTCACTGGACAGAATATTTGAGCCATTTGCAATCATTAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTTAACTCACTGGACAGAATATTTGAGCCATTTGCAATCATTAGAA  150

seq1  CAGTTTTGTTTGGTCAAACCCTTGTGGGATTATATTCTGGGAAAGACGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTTGTTTGGTCAAACCCTTGTGGGATTATATTCTGGGAAAGACGGA  200

seq1  GTGAATTATATTCATTGCAAGAAAACAGCAATTTTAAATATATAAGGGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATTATATTCATTGCAAGAAAACAGCAATTTTAAATATATAAGGGGC  250

seq1  ACCAGGAAAATGTTCATTTTCCTGCAAATTCAATATTATATTTTACTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGAAAATGTTCATTTTCCTGCAAATTCAATATTATATTTTACTTTT  300

seq1  TCGTTTTCTTTTTCTTTTCTTTCTCTCTTTCTTTCTTTCTTTCTTTTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTTTCTTTTTCTTTTCTTTCTCTCTTTCTTTCTTTCTTTCTTTTTTT  350

seq1  TTTTTTTTTTTTTTTTTTTTACAGCAGGGTAAGGCTTTTTATCTTTAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTTTTTACAGCAGGGTAAGGCTTTTTATCTTTAAGC  400

seq1  AATTTATAAAACCCAGCATGGACAGGGAGTGAGGCTGCCATAGAAGACCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATAAAACCCAGCATGGACAGGGAGTGAGGCTGCCATAGAAGACCA  450

seq1  CACTGATACATAAATAGTTACTCTGTAGACAGGGAGAAGCGAGATCGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGATACATAAATAGTTACTCTGTAGACAGGGAGAAGCGAGATCGCAG  500

seq1  GGATTTGAGGTAATAGCTTTTCACTTTGGGAGGTTTTCCTTGTGATCCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTGAGGTAATAGCTTTTCACTTTGGGAGGTTTTCCTTGTGATCCTA  550

seq1  GATGGAGGGCATGGAGTGTTTGCCGATTTTTCCTAGGTTCCAACATGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAGGGCATGGAGTGTTTGCCGATTTTTCCTAGGTTCCAACATGGAA  600

seq1  CATTTATCACGTTACCCCTCTCTGGTGCTAGTGCCCTCACCTGCCCTCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATCACGTTACCCCTCTCTGGTGCTAGTGCCCTCACCTGCCCTCCA  650

seq1  CCTCCTTTCCCAGGAAGCCGGGGCCAGCTGAGTGATGATCCCACCCAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTTTCCCAGGAAGCCGGGGCCAGCTGAGTGATGATCCCACCCAAAC  700

seq1  ACCCTGCTCCCCTTGCAGACTTCCAGACCACATCAAA-TTCGTTCAAATA  749
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ACCCTGCTCCCCTTGCAGACTTCCAGACCACATCAAATTTCGTTCAAATA  750

seq1  GATTAGAGAACAAAAGCAGGAAATGAAGACACATTGTTGCCTTTTATGCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAGAGAACAAAAGCAGGAAATGAAGACACATTGTTGCCTTTTATGCA  800

seq1  GATT-CCCCCCCCCCCCCCACGTGCAGAAGGGGTGTTCAGGCATCTCCCT  848
      |||| |||||||||||||||||||||||| ||||||||||||||||||||
seq2  GATTCCCCCCCCCCCCCCCACGTGCAGAA-GGGTGTTCAGGCATCTCCCT  849

seq1  TGTAGCTTAGATGCTGCCTGCTGGAGGCTCCTTCCCTGT-GCTGGTCACT  897
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TGTAGCTTAGATGCTGCCTGCTGGAGGCTCCTTCCCTGTGGCTGGTCACT  899

seq1  TGAAATTTTAGCAGCCTGAG-AGAAAGCCTCCATCCACATCAGCTCTGTG  946
       ||||||||||||| ||||| |||||| ||||||||||||||||||||||
seq2  GGAAATTTTAGCAGGCTGAGAAGAAAGGCTCCATCCACATCAGCTCTGTG  949

seq1  ACTATGCACCTGACATGTAA-GTTAAA-GTGTAAGTACATTTGTCTTCAA  994
      |||||||||||||||||||| |||||| ||||| |||||||||||||| |
seq2  ACTATGCACCTGACATGTAAGGTTAAAGGTGTAGGTACATTTGTCTTC-A  998

seq1  CACACTACTGGGCAAGCTTGATTAATGTGTAG  1026
      ||||||||||||| |||||||| |  ||||||
seq2  CACACTACTGGGC-AGCTTGATAATGGTGTAG  1029