BAC Information

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BAC

Clone NameB6Ng01-304H13
Chromosome8 (Build37)
Map Location 52,228,347 - 52,229,312
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039954, LOC100039966
Downstream geneLOC667517, LOC623872
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-304H13.bB6Ng01-304H13.g
ACCGA098020GA098021
length1,186963
definitionB6Ng01-304H13.b B6Ng01-304H13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactacagcctctattaagacatctgcacattctgttggatgtta
atttgtaaagatattcagacaacaggatgcctgtttctctgctcatcttt
ttgattacattgattccccaccataaccccaaaccccctccaaaaaaaac
atgatgactattgcctttagaattttcaaacctttagttattttcctgtg
ataaaaccatagacttaggaacgtttgatctttgacaaagaagtaaaata
tatacaatggacaaaagaaaacatcttcaaacaatggtactggtctaact
ggcagtcattacgtagaaatgaaaatagatccatatttgtcaccttgcac
aaagatcaagtccaagtggatcaatgacctcaacatgaaaccgtgataca
cttaatataataaaagtaaatgggcatgatcatctatctcatggacacag
ggggcaatttcctaaacaggactccaatggctcaggttctaagatcaaga
attaataaatgaaactgaaaagcttctctcaggcaaaggacatagtcaat
aggacaaatccacaacctacactttggggggaaaattcttcacttgcccc
ttatcagatatagggctactatgaagtataaggatgaatcttttaaaaat
cttgagttggtttaataattctccagcacctttgactactgaaatctctc
cagatacttttctgggaactcggagaatattgaaggcctgtggtagaaac
aatatttcaaatttaaagaagccaatgactttgattattttgatacctca
attgtaactggccatgaattaggtgacccagtgtatcaattcttatacaa
gttggtggaaaatcagaaaatgattttgctggcttgttgttcttggtatc
tctggaaaaactgatgaaggaaaagaatgaactgtatgatatattgaaag
gctccagatgcaatgaacaatctaaaggttttctaagtatgccctttgag
agaatatttttctccagcagcatagggttcagttgcagaaatcaaactga
ggccctcattatcagttggctgattacagtaaaatttcagcttcagcctc
agaggggtgtcttgccactaaagtaggtctattattggactagtattgga
ttcatataacttgaacattaggcaatgttagggcta
gaattccactttcttaaaaagagcaaacatgcacatgtaggagaatgaat
gtgggaaatttgtgagtacataataatttctgggagatgaaatacaagaa
tcacacagatagcttacaacttaacaagaaataattaccaataaagtatt
ttctcattagtttggatcttgtatttgaagataaacaaattgatgttaga
atttttcacaactgattcaataaactggatattttcaagctttttttttt
ttttttgcagatatatagccattgtcaaaagatttaactctctcaacatg
catgttgacagttgaaagaaaacaaggtgacagtgatctctcttcgtgtt
tcattccttatcctgtaagaagtaagtgctcattccatggtctgtttact
gtcatatcttcatatctgcatgtttgggcttattttgatatttaataaag
cctctaaggaaagagttgagtgctgagatgccccatattaagagctggct
ttcatgggtcctatagagacacacattggtgggtgagtcagtttaaataa
attaagtatccattaaattttggacattgagtactttgtccccagctatt
ggcatactggaaaagggttaggagatgtgtctttgtttgagaaagtgtgt
cactggtgggtgcagatttaaggtttcaaaaggctctcatcaactctgtg
tttctctgccccttccttgtagattgtgatatgaactttcaggtgatatt
ccagtatcatgctatttacctagtactgtgttccccatcactgtgatgat
ggactcctattagtctggacctacaagttctaaataaattcttcctttta
taaaatggtttgttcatggtgttttaccaaagcaatataaaatacaaaat
ctatatatatatatatatatatatatatatatatatatatatatatatat
atattactgggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_52228347_52229312
seq2: B6Ng01-304H13.g_67_1029

seq1  GAATTCCACTTTCTTAAAAAGAGCAAACATGCACATGTAGGAGAATGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACTTTCTTAAAAAGAGCAAACATGCACATGTAGGAGAATGAAT  50

seq1  GTGGGAAATTTGTGAGTACATAATAATTTCTGGGAGATGAAATACAAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGAAATTTGTGAGTACATAATAATTTCTGGGAGATGAAATACAAGAA  100

seq1  TCACACAGATAGCTTACAACTTAACAAGAAATAATTACCAATAAAGTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACAGATAGCTTACAACTTAACAAGAAATAATTACCAATAAAGTATT  150

seq1  TTCTCATTAGTTTGGATCTTGTATTTGAAGATAAACAAATTGATGTTAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCATTAGTTTGGATCTTGTATTTGAAGATAAACAAATTGATGTTAGA  200

seq1  ATTTTTCACAACTGATTCAATAAACTGGATATTTTCAAGCTTTTTTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCACAACTGATTCAATAAACTGGATATTTTCAAGCTTTTTTTTTT  250

seq1  TTTTTTGCAGATATATAGCCATTGTCAAAAGATTTAACTCTCTCAACATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGCAGATATATAGCCATTGTCAAAAGATTTAACTCTCTCAACATG  300

seq1  CATGTTGACAGTTGAAAGAAAACAAGGTGACAGTGATCTCTCTTCGTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTGACAGTTGAAAGAAAACAAGGTGACAGTGATCTCTCTTCGTGTT  350

seq1  TCATTCCTTATCCTGTAAGAAGTAAGTGCTCATTCCATGGTCTGTTTACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCCTTATCCTGTAAGAAGTAAGTGCTCATTCCATGGTCTGTTTACT  400

seq1  GTCATATCTTCATATCTGCATGTTTGGGCTTATTTTGATATTTAATAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATATCTTCATATCTGCATGTTTGGGCTTATTTTGATATTTAATAAAG  450

seq1  CCTCTAAGGAAAGAGTTGAGTGCTGAGATGCCCCATATTAAGAGCTGGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTAAGGAAAGAGTTGAGTGCTGAGATGCCCCATATTAAGAGCTGGCT  500

seq1  TTCATGGGTCCTATAGAGACACACATTGGTGGGTGAGTCAGTTTAAATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGGGTCCTATAGAGACACACATTGGTGGGTGAGTCAGTTTAAATAA  550

seq1  ATTAAGTATCCATTAAATTTTGGACATTGAGTACTTTGTCCCCAGCTATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGTATCCATTAAATTTTGGACATTGAGTACTTTGTCCCCAGCTATT  600

seq1  GGCATACTGGAAAAGGGTTAGGAGATGTGTCTTTGTTTGAGAAAGTGTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATACTGGAAAAGGGTTAGGAGATGTGTCTTTGTTTGAGAAAGTGTGT  650

seq1  CACTGGTGGGTGCAGATTTAAGGTTTCAAAAGGCTCTCATCAACTCTGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGTGGGTGCAGATTTAAGGTTTCAAAAGGCTCTCATCAACTCTGTG  700

seq1  TTTCTCTGCCCCTTCCTTGTAGATTGTGATATGAACTTTCAGGTGATATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTGCCCCTTCCTTGTAGATTGTGATATGAACTTTCAGGTGATATT  750

seq1  CCAGTATCATGCTATTTACCTAGTACTGTGTTCCCCATCACTGTGATGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTATCATGCTATTTACCTAGTACTGTGTTCCCCATCACTGTGATGAT  800

seq1  GGACTCCTATTAGTCTGGACCTACAAGTTCTAAATAAATTCTTCCTTTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCCTATTAGTCTGGACCTACAAGTTCTAAATAAATTCTTCCTTTTA  850

seq1  TAAAATGGTTTGTTCATGGTGTTTTTACCAAAGCAATATAAAATAACAAA  900
      ||||||||||||||||||||| |||||||||||||||||||||| |||||
seq2  TAAAATGGTTTGTTCATGGTG-TTTTACCAAAGCAATATAAAAT-ACAAA  898

seq1  ATCATATATATATATATATATATATATATATATATATATATATATATATA  950
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATC-TATATATATATATATATATATATATATATATATATATATATATATA  947

seq1  TATATATACTTGGGTT  966
      |||||||   ||||||
seq2  TATATATTACTGGGTT  963