BAC Information

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BAC

Clone NameB6Ng01-305F12
Chromosome8 (Build37)
Map Location 43,941,602 - 44,066,566
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC671994, Zfp353, EG620772, LOC628212
Downstream geneTriml1, LOC622082, EG622117, LOC100039417, Zfp42, Adam26b, Adam26a, EG384813, Adam34, EG384814, LOC100039472, LOC547011, LOC622263
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-305F12.bB6Ng01-305F12.g
ACCGA098657GA098658
length1701,149
definitionB6Ng01-305F12.b B6Ng01-305F12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(43,941,602 - 43,941,771)(44,065,447 - 44,066,566)
sequence
gaattccatgtaagaacttaattttttccatttatataaaaatttcaaag
tgccatattaatcttttttgtttatatacttttgtatgtgtgtgcgtgtg
tgtgtgtgtgagagagagaaagagagagagagagagagagagagagagag
agagagagagagagagagag
gaattcaatttccttcattcctcactcaaggctaggggaattacaacagt
ataatggagacttatttgtgacacataatcacaagggaaatacaaaactt
atttggaatgaccttttagatttacagtttcatctacttttgctattttg
tatgtcttctcaagttcagggcatgtccttctaggttctaaggtaggatt
ccctggtgaacagctaagtcaaagaagacagatattgatgtccatatttg
tgaatgcaccagatgcccctgggagaaggggagacagatcaatctgcctg
gggcagtgggaaggcattgtaagtaatgggcatattttactacactttgg
aagtgaagagtcattgcagaattctagtctctttttagctttctccctta
atacagtaaaacacagcataacaacacccataaaataacaatctatggtc
aaaatagtggacaaagaaaatgagaatttatggttcctcaaatgaattta
gaaaaaaatgtacacacttttacaattcctacaagcataaattaattcta
tattactaaaaattttaggtagcaaatagccttttctagtttatattagc
tattcaaatgctttatttaattttattgaaagatataattttgtatcacc
tgatattgtcaactatgaaaatacttgactaagcctgtcacatatgaaat
taatgttttcattatgcaacatagtagcttaaagatcaatataaaatgat
gataaaatctaatttgacagtttgagtttttgaaagactttttttggaaa
tctgggataatttccatatttaacaaattcatttacaataaaacttaata
aaaggagtcatgttagttcattcactttatttcaactgatgcctggtgac
accttgaaattttattatcagttcaattaggtactgggtgttattttaat
gggcgagagtcccctttccttttctgcttcatctcaaatttggtagtctt
ggttgtaatttataatatattaaagtgtgtattttattcctattcatagt
tacttagatctaggagttacttttttttaataggaaaaaatacaaaaaca
tttactgttaataaagaaagaaaatttcctttttaaccttttacctcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_43941602_43941771
seq2: B6Ng01-305F12.b_44_213

seq1  GAATTCCATGTAAGAACTTAATTTTTTCCATTTATATAAAAATTTCAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGTAAGAACTTAATTTTTTCCATTTATATAAAAATTTCAAAG  50

seq1  TGCCATATTAATCTTTTTTGTTTATATACTTTTGTATGTGTGTGCGTGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATATTAATCTTTTTTGTTTATATACTTTTGTATGTGTGTGCGTGTG  100

seq1  TGTGTGTGTGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  150

seq1  AGAGAGAGAGAGAGAGAGAG  170
      ||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAG  170

seq1: chr8_44065447_44066566
seq2: B6Ng01-305F12.g_69_1217 (reverse)

seq1  CTGA-GTAAA--GTTAAAAA-GAAATATTTCTTCTTTATT-ACAGT-AAT  44
      |||| |||||  |||||||| ||||| ||  ||||||||| ||||| |||
seq2  CTGAGGTAAAAGGTTAAAAAGGAAATTTTCTTTCTTTATTAACAGTAAAT  50

seq1  GTTTTTGTATTTTTCCCTATT--AAAAAAGT-ACTCTTAGTACTAAGTAA  91
      |||||||||||||| ||||||  |||||||| |||| |||  ||||||||
seq2  GTTTTTGTATTTTTTCCTATTAAAAAAAAGTAACTCCTAGATCTAAGTAA  100

seq1  CTATG-ATAG--AT-AAATACACACTTTATTATATTATAAATTTACACCA  137
      ||||| ||||  || |||||||||||||| ||||||||||| ||||| | 
seq2  CTATGAATAGGAATAAAATACACACTTTAATATATTATAAA-TTACAACC  149

seq1  AAGACTAC--AAATTGAGATG-AGCAGAAA--GGAAGGGGACTCTCG-CC  181
      ||||||||  || |||||||| ||||||||  | ||||||||||||| ||
seq2  AAGACTACCAAATTTGAGATGAAGCAGAAAAGGAAAGGGGACTCTCGCCC  199

seq1  ATT-ATATAACACCCAGTACCTAATTG-ACTGATAAT-AAATTTC-AGGT  227
      ||| | ||||||||||||||||||||| ||||||||| ||||||| ||||
seq2  ATTAAAATAACACCCAGTACCTAATTGAACTGATAATAAAATTTCAAGGT  249

seq1  GTCACCAGGCATCAGTTGAA--TAAGTGAATGAACT-ACATGACT-CTTT  273
      ||||||||||||||||||||   ||||||||||||| |||||||| ||||
seq2  GTCACCAGGCATCAGTTGAAATAAAGTGAATGAACTAACATGACTCCTTT  299

seq1  TATTAAGTTTTATTGTAAATGAATTTGTT-AATATGGAAATTAT-CCAGA  321
      ||||||||||||||||||||||||||||| |||||||||||||| |||||
seq2  TATTAAGTTTTATTGTAAATGAATTTGTTAAATATGGAAATTATCCCAGA  349

seq1  TTTCCAAAAAAAGTCTTTCAAAAACTC-AACTGTCAAATTAGATTTTATC  370
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TTTCCAAAAAAAGTCTTTCAAAAACTCAAACTGTCAAATTAGATTTTATC  399

seq1  ATCATTTTATATTGATCTTTAAGCTACTATGTTGCATAATGAAAACATTA  420
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTTATATTGATCTTTAAGCTACTATGTTGCATAATGAAAACATTA  449

seq1  ATTTCATATGTGACAGGCTTAGTCAAGTATTTTCATAGTTGACAATATCA  470
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATATGTGACAGGCTTAGTCAAGTATTTTCATAGTTGACAATATCA  499

seq1  GGTGATACAAAATTATATCTTTCAATAAAATTAAATAAAGCATTTGAATA  520
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATACAAAATTATATCTTTCAATAAAATTAAATAAAGCATTTGAATA  549

seq1  GCTAATATAAACTAGAAAAGGCTATTTGCTACCTAAAATTTTTAGTAATA  570
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATATAAACTAGAAAAGGCTATTTGCTACCTAAAATTTTTAGTAATA  599

seq1  TAGAATTAATTTATGCTTGTAGGAATTGTAAAAGTGTGTACATTTTTTTC  620
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATTAATTTATGCTTGTAGGAATTGTAAAAGTGTGTACATTTTTTTC  649

seq1  TAAATTCATTTGAGGAACCATAAATTCTCATTTTCTTTGTCCACTATTTT  670
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTCATTTGAGGAACCATAAATTCTCATTTTCTTTGTCCACTATTTT  699

seq1  GACCATAGATTGTTATTTTATGGGTGTTGTTATGCTGTGTTTTACTGTAT  720
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCATAGATTGTTATTTTATGGGTGTTGTTATGCTGTGTTTTACTGTAT  749

seq1  TAAGGGAGAAAGCTAAAAAGAGACTAGAATTCTGCAATGACTCTTCACTT  770
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGGAGAAAGCTAAAAAGAGACTAGAATTCTGCAATGACTCTTCACTT  799

seq1  CCAAAGTGTAGTAAAATATGCCCATTACTTACAATGCCTTCCCACTGCCC  820
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGTGTAGTAAAATATGCCCATTACTTACAATGCCTTCCCACTGCCC  849

seq1  CAGGCAGATTGATCTGTCTCCCCTTCTCCCAGGGGCATCTGGTGCATTCA  870
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAGATTGATCTGTCTCCCCTTCTCCCAGGGGCATCTGGTGCATTCA  899

seq1  CAAATATGGACATCAATATCTGTCTTCTTTGACTTAGCTGTTCACCAGGG  920
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATATGGACATCAATATCTGTCTTCTTTGACTTAGCTGTTCACCAGGG  949

seq1  AATCCTACCTTAGAACCTAGAAGGACATGCCCTGAACTTGAGAAGACATA  970
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTACCTTAGAACCTAGAAGGACATGCCCTGAACTTGAGAAGACATA  999

seq1  CAAAATAGCAAAAGTAGATGAAACTGTAAATCTAAAAGGTCATTCCAAAT  1020
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATAGCAAAAGTAGATGAAACTGTAAATCTAAAAGGTCATTCCAAAT  1049

seq1  AAGTTTTGTATTTCCCTTGTGATTATGTGTCACAAATAAGTCTCCATTAT  1070
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTTGTATTTCCCTTGTGATTATGTGTCACAAATAAGTCTCCATTAT  1099

seq1  ACTGTTGTAATTCCCCTAGCCTTGAGTGAGGAATGAAGGAAATTGAATTC  1120
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTGTAATTCCCCTAGCCTTGAGTGAGGAATGAAGGAAATTGAATTC  1149