BAC Information

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BAC

Clone NameB6Ng01-306M08
Chromosome8 (Build37)
Map Location 36,983,607 - 37,135,605
singlet/doubletdoublet
Overlap geneLOC671641
Upstream geneTnks, LOC666792, LOC666797, LOC666804, Ppp1r3b, Thex1, Mfhas1, LOC100041572, Gm501, Cldn23
Downstream geneD8Ertd82e, Lonrf1, EG544878, 6430573F11Rik, Dlc1, LOC100042892, A730069N07Rik, AI429214
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-306M08.bB6Ng01-306M08.g
ACCGA099716GA099717
length1321,141
definitionB6Ng01-306M08.b B6Ng01-306M08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(36,983,607 - 36,983,738)(37,134,474 - 37,135,605)
sequence
acctcctagaccccttgaatatgcagcctttgtgctaatagttcagactg
gtagagaacacttccagggaagttccctgttcgagggagggccaggctgt
atggtgtgtgtgtgtgtgtgtgtgtgtgtgtg
gaattcatcccccttctctcatgaccccacataggtttgaggagcaagca
agagtctggctgaattgaacccactggatctgttcttattgtgactgttg
actgttgttggctgtgatctctgagggagcgttttgtttgctttagcaag
cagtcactttcctctccctttgcacatactctctgggagaagttagttac
cctgtacaacctatactcaacaagtattggtctcacctccatcagggaca
tgatgcactttgagtatttgatttcccctcgtgtgcaaatatttcttcct
tacctcgttcctcttactctgtgttcttctacctcaaaacctgaaacccg
tgtggagtcaaggaaaagtagggaaaatgaattccaattgaggtacgttc
cagaaaacaggtacattcctcatcttctaaactgccaaagtcaccacaca
ggggcttaggaacacgtgacaataaggtgtcacatattgcctggagtggg
atccggagcctgctctattcaatatttcatgttggcatagacacttattt
taccaggccatatgctgattcttctttgtggctcaaactgttctaacttt
gagcatgaggtgatcgttgtcggcttctgcatctctttgagatgtccttt
cattgtgcgtatatgtccatgtgtatccatgtgtgtggagtacacatgtg
tggaaggtgcatgtgtatgtgtttccatgagtgtgtggaggccagaggtc
agcctagggtatcagtcttcagaagccaccctccatggctccttagccca
ataggctagcctgggccagcaagctccagcaatgctcctggctccacctt
tacaagactgggtttacaaggcaaaaataattcatgccagattttgcaca
tgtgtcctaaggatggaactcggatccttattcacatacaggaagtactg
tactaactgagccatttccctggcttgtttttgtaggacttagaggtaca
gtcttacttttctggcacggtgagattctggtccttcaatcttgtatttt
ttctgacgccaggaacacatttaatctttctttccatggaagcctcattc
tttcattggagacttagaagggtgcctactttagaaacaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_36983607_36983738
seq2: B6Ng01-306M08.b_51_182

seq1  ACCTCCTAGACCCCTTGAATATGCAGCCTTTGTGCTAATAGTTCAGACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCTAGACCCCTTGAATATGCAGCCTTTGTGCTAATAGTTCAGACTG  50

seq1  GTAGAGAACACTTCCAGGGAAGTTCCCTGTTCGAGGGAGGGCCAGGCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGAACACTTCCAGGGAAGTTCCCTGTTCGAGGGAGGGCCAGGCTGT  100

seq1  ATGGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  132
      ||||||||||||||||||||||||||||||||
seq2  ATGGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  132

seq1: chr8_37134474_37135605
seq2: B6Ng01-306M08.g_69_1209 (reverse)

seq1  CTTGTTTCTAAA--TGGCA-CCTTCTAAGTCTCCAATAGAAGAAATGAGG  47
      ||||||||||||   |||| ||||||||||||||||| |||  |||||||
seq2  CTTGTTTCTAAAGTAGGCACCCTTCTAAGTCTCCAAT-GAAAGAATGAGG  49

seq1  GTT-CATGGAAAGAAAGATTAATTGTTGGTCTGGCGTCAG--AAAATAC-  93
       || |||||||||||||||||| |||    ||||||||||  ||||||| 
seq2  CTTCCATGGAAAGAAAGATTAAATGTGTTCCTGGCGTCAGAAAAAATACA  99

seq1  AGATGAAGGGACCAGAATCTCACCGTGCCAG-AAAGTAAGACTGTACCTC  142
      ||||  | ||||||||||||||||||||||| ||||||||||||||||||
seq2  AGATTGAAGGACCAGAATCTCACCGTGCCAGAAAAGTAAGACTGTACCTC  149

seq1  TAAGTCCTAC-AAAACAAGCCAGGGAAATGGCTCAGTTAGTACAGTACTT  191
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCCTACAAAAACAAGCCAGGGAAATGGCTCAGTTAGTACAGTACTT  199

seq1  CCTGTATGTGAATAAGGATCCGAGTTCCATCCTTAGGACACATGTGCAAA  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTATGTGAATAAGGATCCGAGTTCCATCCTTAGGACACATGTGCAAA  249

seq1  ATCTGGGCATG-ATTATTTTTG-CTTGTAAACCCAGTCTTGTAAAGGTGG  289
      |||| |||||| |||||||||| |||||||||||||||||||||||||||
seq2  ATCT-GGCATGAATTATTTTTGCCTTGTAAACCCAGTCTTGTAAAGGTGG  298

seq1  AGCCAGGAGCATTGCTGGAGCTTGCTGGCCCAGGCTAGCCTATTGGGCTA  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGGAGCATTGCTGGAGCTTGCTGGCCCAGGCTAGCCTATTGGGCTA  348

seq1  AGGAGCCATGGAGGGTGGCTTCTGAAGACTGATACCCTAGGCTGACCTCT  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCCATGGAGGGTGGCTTCTGAAGACTGATACCCTAGGCTGACCTCT  398

seq1  GGCCTCCACACACTCATGGAAACACATACACATGCACCTTCCACACATGT  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCCACACACTCATGGAAACACATACACATGCACCTTCCACACATGT  448

seq1  GTACTCCACACACATGGATACACATGGACATATACGCACAATGAAAGGAC  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTCCACACACATGGATACACATGGACATATACGCACAATGAAAGGAC  498

seq1  ATCTCAAAGAGATGCAGAAGCCGACAACGATCACCTCATGCTCAAAGTTA  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAAAGAGATGCAGAAGCCGACAACGATCACCTCATGCTCAAAGTTA  548

seq1  GAACAGTTTGAGCCACAAAGAAGAATCAGCATATGGCCTGGTAAAATAAG  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGTTTGAGCCACAAAGAAGAATCAGCATATGGCCTGGTAAAATAAG  598

seq1  TGTCTATGCCAACATGAAATATTGAATAGAGCAGGCTCCGGATCCCACTC  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTATGCCAACATGAAATATTGAATAGAGCAGGCTCCGGATCCCACTC  648

seq1  CAGGCAATATGTGACACCTTATTGTCACGTGTTCCTAAGCCCCTGTGTGG  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAATATGTGACACCTTATTGTCACGTGTTCCTAAGCCCCTGTGTGG  698

seq1  TGACTTTGGCAGTTTAGAAGATGAGGAATGTACCTGTTTTCTGGAACGTA  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTTGGCAGTTTAGAAGATGAGGAATGTACCTGTTTTCTGGAACGTA  748

seq1  CCTCAATTGGAATTCATTTTCCCTACTTTTCCTTGACTCCACACGGGTTT  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAATTGGAATTCATTTTCCCTACTTTTCCTTGACTCCACACGGGTTT  798

seq1  CAGGTTTTGAGGTAGAAGAACACAGAGTAAGAGGAACGAGGTAAGGAAGA  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTTTGAGGTAGAAGAACACAGAGTAAGAGGAACGAGGTAAGGAAGA  848

seq1  AATATTTGCACACGAGGGGAAATCAAATACTCAAAGTGCATCATGTCCCT  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTGCACACGAGGGGAAATCAAATACTCAAAGTGCATCATGTCCCT  898

seq1  GATGGAGGTGAGACCAATACTTGTTGAGTATAGGTTGTACAGGGTAACTA  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAGGTGAGACCAATACTTGTTGAGTATAGGTTGTACAGGGTAACTA  948

seq1  ACTTCTCCCAGAGAGTATGTGCAAAGGGAGAGGAAAGTGACTGCTTGCTA  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTCCCAGAGAGTATGTGCAAAGGGAGAGGAAAGTGACTGCTTGCTA  998

seq1  AAGCAAACAAAACGCTCCCTCAGAGATCACAGCCAACAACAGTCAACAGT  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAACAAAACGCTCCCTCAGAGATCACAGCCAACAACAGTCAACAGT  1048

seq1  CACAATAAGAACAGATCCAGTGGGTTCAATTCAGCCAGACTCTTGCTTGC  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATAAGAACAGATCCAGTGGGTTCAATTCAGCCAGACTCTTGCTTGC  1098

seq1  TCCTCAAACCTATGTGGGGTCATGAGAGAAGGGGGATGAATTC  1132
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAAACCTATGTGGGGTCATGAGAGAAGGGGGATGAATTC  1141