BAC Information

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BAC

Clone NameB6Ng01-306N10
Chromosome8 (Build37)
Map Location 64,375,866 - 64,376,510
singlet/doubletsinglet
Overlap genePalld
Upstream gene2700029M09Rik, Clcn3, B230317F23Rik, Nek1, Sh3rf1, EG664975, Cbr4, LOC100040872
Downstream geneBC013672, Anxa10, LOC100040775, LOC384830, LOC100040804, LOC665267
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-306N10.bB6Ng01-306N10.g
ACCGA099768GA099769
length6461,163
definitionB6Ng01-306N10.b B6Ng01-306N10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttgcttattctaaatagatattgcttccaaatataaattcctat
gatcatacattttagtaacttcctgtgcatgctacactcattttttaaat
ttgtagcactaaatttgatgattctttatacatgtaattttatgactcag
tttgttcttgaattaatatcttcttgagtttttttctatatattggatat
tagttctctatcagatttaggattaacaaaggtcttttcccagtatgttg
gttgccagtcaaccctcaccagctacagcaatttggggttgaccgggcat
tttgcctggagagcacagcagagctgatgctgatagtggggtgcaggtaa
cccagtccctggatgagagctctggaatattgggactgccacttgggaga
gctggccttggggtcatgagagtgggtgagttgctctgtcccttgcctgc
agtactcaggagaaccagcagagaagggctggacttggttgaggaggaga
gagtgagccagtcctgaggggaagggacagctggctctgacactcatctg
gcctgaggtgactgaggtggggtgggtgtgagaataatgccctcctcctc
accacctgtgatagtggggagagctgtcttccgaggccatgagagc
gaattcaacaccctactctcaccagtagacagatcctggaaacagaaact
aaacagagacacatggacactgacagaaattatgaaacaaatggatttaa
ttgatatctacagaacattttatcctaaaacaaaaggatattcttctcag
agccacatagtacctatccaaaattgaccatataattggttacaaaacag
gcatcaagagatacaaaaatattgaaattatcccatgcatcctatctgat
cagaacggactaaagctggtcttcaataacaacataaataatagaaagcc
aacattcatgtggaaactgaacaacactctactcaatgattccttgatca
aggatgaaataaagaaagaaattaaagactttttagagtttaatgaaaat
gaagccacaacatacccaaacttatgggacacaataaaggcagtcctaag
aggaaaactcatggctctgcgtgcctcaaaaaagaaactagagagagcat
acactagcaggctgacagcacacctagaagctctagaactaaaggaagca
aattcacccaagaggaatagacagcaggaaataatcaaactcagggctga
tatcaaccaagtggaaataaaaagaactattcaaagaatcaaccaaacaa
ggagctggttctttgagaaaatcaacaagatagataaacccttagccaga
ctaactagagggcacagggacagtatcctaatcaacaaaataaaaaatga
aaaaggagacataacaacagaacctgagaatatccaaaacttcatcagat
actactacaaaaggagttctatcagaccttcaaagaagacttaattccaa
ctcttctcaaactattccacaaaatagaaagagaaggtactctacccaat
gcattctatgaagccacaattactctgatacctaaaccatacaagatcca
caaagaaagagaacttcagactaatttccttatgaatatcaatgaaaaaa
tatgaataaaatcctcgcaattaaatccagaacatatcaatgatcataca
tcatgaccaggtagctcatacaggatgcaagatgtaatatatgcatcatc
acggtatccattattaacagctcagaacaaagccacatgaatcatttcat
tgagatggcctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_64375866_64376510
seq2: B6Ng01-306N10.b_50_695

seq1  GAATTCTTGCTTATTCTAAATAGATATTGCTTCCAAATATAAATTCCTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGCTTATTCTAAATAGATATTGCTTCCAAATATAAATTCCTAT  50

seq1  GATCATACATTTTAGTAACTTCCTGTGCATGCTACACTCATTTTTTAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATACATTTTAGTAACTTCCTGTGCATGCTACACTCATTTTTTAAAT  100

seq1  TTGTAGCACTAAATTTGATGATTCTTTATACATGTAATTTTATGACTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGCACTAAATTTGATGATTCTTTATACATGTAATTTTATGACTCAG  150

seq1  TTTGTTCTTGAATTAATATCTTCTTGAGTTTTTTTCTATATATTGGATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCTTGAATTAATATCTTCTTGAGTTTTTTTCTATATATTGGATAT  200

seq1  TAGTTCTCTATCAGATTTAGGATTAACAAAGGTCTTTTCCCAGTATGTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCTCTATCAGATTTAGGATTAACAAAGGTCTTTTCCCAGTATGTTG  250

seq1  GTTGCCAGTCAACCCTCACCAGCTACAGCAATTTGGGGTTGACCGGGCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCCAGTCAACCCTCACCAGCTACAGCAATTTGGGGTTGACCGGGCAT  300

seq1  TTTGCCTGGAGAGCACAGCAGAGCTGATGCTGATAGTGGGGTGCAGGTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCTGGAGAGCACAGCAGAGCTGATGCTGATAGTGGGGTGCAGGTAA  350

seq1  CCCAGTCCCTGGATGAGAGCTCTGGAATATTGGGACTGCCACTTGGGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTCCCTGGATGAGAGCTCTGGAATATTGGGACTGCCACTTGGGAGA  400

seq1  GCTGGCCTTGGGGTCATGAGAGTGGGTGAGTTGCTCTGTCCCTTGCCTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCCTTGGGGTCATGAGAGTGGGTGAGTTGCTCTGTCCCTTGCCTGC  450

seq1  AGTACTCAGGAGAACCAGCAGAGAAGGGCTGGACTTGGTTGAGGAGGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTCAGGAGAACCAGCAGAGAAGGGCTGGACTTGGTTGAGGAGGAGA  500

seq1  GAGTGAGCCAGTCCTGAGGGGAAGGGACAGCTGGCTCTGACACTCATCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGAGCCAGTCCTGAGGGGAAGGGACAGCTGGCTCTGACACTCATCTG  550

seq1  GCCTGAGGTGACTGAGGTGGGGTGGGTGTGAGAATAATGCCCTCCTCCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGAGGTGACTGAGGTGGGGTGGGTGTGAGAATAATGCCCTCCTCCTC  600

seq1  ACCACCTGTGATAGTGGGGAGAGCTGTC-TCCGAGGCCATGAGAGC  645
      |||||||||||||||||||||||||||| |||||||||||||||||
seq2  ACCACCTGTGATAGTGGGGAGAGCTGTCTTCCGAGGCCATGAGAGC  646