BAC Information

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BAC

Clone NameB6Ng01-307F20
Chromosome8 (Build37)
Map Location 34,756,430 - 34,934,370
singlet/doubletdoublet
Overlap geneGsr, Gtf2e2, Rbpms
Upstream geneLOC100042715, LOC628408, EG628412, Wrn, Purg, LOC666630, Hmgb1-rs17, Tex15, Ppp2cb, Ubxd6
Downstream geneLOC100042769, Dctn6, LOC100042777, Mboat4, Leprotl1, LOC666694, Tmem66, LOC619780, LOC666718, EG234159, LOC666746, Dusp4, LOC675578, Tnks
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-307F20.bB6Ng01-307F20.g
ACCGA100156GA100157
length1,1141,090
definitionB6Ng01-307F20.b B6Ng01-307F20.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(34,933,257 - 34,934,370)(34,756,430 - 34,757,520)
sequence
gaattcccctcctaattctttcacttgagtttggcaaacatttggggcga
ggagagagtagttgtgctttcctgttaagctagaggaaacgggcctgtga
ggaccctcatcatgaggccaccatacctggcattttaactcgggaagcct
caaagcgagcactttcctgactgagctatttcctgttctacagaaacatt
agtgtctccatggtaggtattttatttttgctgaggagcttgggggacac
acacaggcacacacacacacacacacacacacacacacacacccttgtgt
tttcacatataccaaatgtaaagagaacagtgtaaccaataacagaaatg
caccattcctgcagaatagacttttggccattatttaccgacagtccctt
ctgggggtctctctgtggttgtatcactcttgtcagggcaatgtgccgcc
cacttatgtctcttagctggctttagtctagggcactttcttcccaccct
tcattttcttattgatttttttaaagataagatgttagccttcttgatta
aaaggaaaaaaaaagtccttctttggggtctgttttattcgtcttcacag
tccttctcggttcccatgcccctctgttggctttaaaatcaagggcaatg
agattaggtttgagttcaggtatgacttttgaacaagaatgcatcctagg
tccacatggtcacttctcctgacaactgtgaacaggagtccttgttggga
tctaggcgggactgtggattcaggcagtgaatccatccggctgtccatcc
atcattcatcttatgttccttatcaatttgattggctgttgttttgagac
agtgtctgtgtacatccatgataagcgtggaactcctttgtagactagtt
tgaccttgaactttgcctctctctgagcctcctaccctctcctttcttga
gtgccagaattatagatctgtaccacaccaacttcatcttaaaccttgtc
cgtgacgttttccccattcctttcattgggcataaggatgtctggctttc
ctaaaatctgggtggattacaggcagctctgcccactggatagtgttggc
gctttaatggtgag
gaattctaggtcttgagcgcacatgtgcatccgtgcacacacacacacac
acacacacacacacacacacacacaaaatcctctctcatggaagtcagaa
gacaatttgtaggagttggttttctttttccaccatcttgggcctaggaa
ttaaactcaggctgtcaagaattgacagcaggtcccctcagtcccctcag
ccatctcaccagcccagctctcaccagcccagcttttacattttttaata
atttaaggagcacttcagtgttggagtacttactcagagtgtattaagcc
ctaggttcaatctctagtactggaaaactaaaactaaaaaaactgaatat
agtaatgtatgctcataattcccgcttttacaagactaaggaagattgcc
ataggttcaaagccacctgggttacatggtctgtttcaaggcagcctgag
ttatagtaagtctttatatcgaaatacatgcatatgtcagacataatagc
acctaactttaatcccagcactgggaaagtagaacagagagatctctgaa
tttgaggccagccgggaccacatagcgaattcccaggctgccactagtga
gaccttgtctcagaaaaagaaaagaaaaagccacaaaaaattcagtcaac
aagttgaaaggggaagaaggggatggcaaagagcaggtaaattccaatca
ctatgatgatgaccatgcaaaatcttcaaaataccaaggaactgtaagca
aggataggttggttaaggggggagctagaagggagaaccagctgaaagtt
catttacaatgcaggaaaccccacaagctcccactctgaaagtctgctcc
tcttggcccacagaaaagagctgagatttcttgttctggaaaggcagaag
gagagctcactcaattggagacagggaggatgagacggcccagcctttac
agctcagccagtgaagactcgcttgctgcccagcctggtgacctgggttt
gaccttccagaccacagaagaaggcgaaccaacctcccaattgtgttctg
cttcacacactcaccattgggtgtgcatttccacgttgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_34933257_34934370
seq2: B6Ng01-307F20.b_43_1156 (reverse)

seq1  CTCACCATAAAAGCGCAAACACTAATCCAAGTGGGGCAGAGCTGCCTGTA  50
      |||||||| ||||||| |||||| |||| ||| |||||||||||||||||
seq2  CTCACCATTAAAGCGCCAACACT-ATCC-AGT-GGGCAGAGCTGCCTGTA  47

seq1  AACCACCAGAATTTTAGGGAAGCCAGACAT-CTTATGCCCAATG-AAGGA  98
      | |||||   |||||||| ||||||||||| ||||||||||||| |||||
seq2  ATCCACCCAGATTTTAGGAAAGCCAGACATCCTTATGCCCAATGAAAGGA  97

seq1  ATGGGGAAAAGGTCAACGGACAAGGTTTTAAGATGAAGTTGGTGTGGTAC  148
      |||||||||| ||| |||||||||| ||||||||||||||||||||||||
seq2  ATGGGGAAAACGTC-ACGGACAAGG-TTTAAGATGAAGTTGGTGTGGTAC  145

seq1  AGATCTATAATTCTGGCACTCAAG-AAGGAGA-GGTAGGAGGCTCAGAGA  196
      |||||||||||||||||||||||| ||||||| |||||||||||||||||
seq2  AGATCTATAATTCTGGCACTCAAGAAAGGAGAGGGTAGGAGGCTCAGAGA  195

seq1  GAGGC-AAGTTCAAGGTCAAACTAGTCTACAAAGGAGTTCCACGCTTATC  245
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAAAGTTCAAGGTCAAACTAGTCTACAAAGGAGTTCCACGCTTATC  245

seq1  ATGGATGTACACAGACACTGTCTCAAAACAACAGCCAATCAAATTGATAA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATGTACACAGACACTGTCTCAAAACAACAGCCAATCAAATTGATAA  295

seq1  GGAACATAAGATGAATGATGGATGGACAGCCGGATGGATTCACTGCCTGA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACATAAGATGAATGATGGATGGACAGCCGGATGGATTCACTGCCTGA  345

seq1  ATCCACAGTCCCGCCTAGATCCCAACAAGGACTCCTGTTCACAGTTGTCA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACAGTCCCGCCTAGATCCCAACAAGGACTCCTGTTCACAGTTGTCA  395

seq1  GGAGAAGTGACCATGTGGACCTAGGATGCATTCTTGTTCAAAAGTCATAC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAGTGACCATGTGGACCTAGGATGCATTCTTGTTCAAAAGTCATAC  445

seq1  CTGAACTCAAACCTAATCTCATTGCCCTTGATTTTAAAGCCAACAGAGGG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACTCAAACCTAATCTCATTGCCCTTGATTTTAAAGCCAACAGAGGG  495

seq1  GCATGGGAACCGAGAAGGACTGTGAAGACGAATAAAACAGACCCCAAAGA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGGAACCGAGAAGGACTGTGAAGACGAATAAAACAGACCCCAAAGA  545

seq1  AGGACTTTTTTTTTCCTTTTAATCAAGAAGGCTAACATCTTATCTTTAAA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTTTTTTTTTCCTTTTAATCAAGAAGGCTAACATCTTATCTTTAAA  595

seq1  AAAATCAATAAGAAAATGAAGGGTGGGAAGAAAGTGCCCTAGACTAAAGC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCAATAAGAAAATGAAGGGTGGGAAGAAAGTGCCCTAGACTAAAGC  645

seq1  CAGCTAAGAGACATAAGTGGGCGGCACATTGCCCTGACAAGAGTGATACA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTAAGAGACATAAGTGGGCGGCACATTGCCCTGACAAGAGTGATACA  695

seq1  ACCACAGAGAGACCCCCAGAAGGGACTGTCGGTAAATAATGGCCAAAAGT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAGAGAGACCCCCAGAAGGGACTGTCGGTAAATAATGGCCAAAAGT  745

seq1  CTATTCTGCAGGAATGGTGCATTTCTGTTATTGGTTACACTGTTCTCTTT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCTGCAGGAATGGTGCATTTCTGTTATTGGTTACACTGTTCTCTTT  795

seq1  ACATTTGGTATATGTGAAAACACAAGGGTGTGTGTGTGTGTGTGTGTGTG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTGGTATATGTGAAAACACAAGGGTGTGTGTGTGTGTGTGTGTGTG  845

seq1  TGTGTGTGTGTGCCTGTGTGTGTCCCCCAAGCTCCTCAGCAAAAATAAAA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGCCTGTGTGTGTCCCCCAAGCTCCTCAGCAAAAATAAAA  895

seq1  TACCTACCATGGAGACACTAATGTTTCTGTAGAACAGGAAATAGCTCAGT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTACCATGGAGACACTAATGTTTCTGTAGAACAGGAAATAGCTCAGT  945

seq1  CAGGAAAGTGCTCGCTTTGAGGCTTCCCGAGTTAAAATGCCAGGTATGGT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAAGTGCTCGCTTTGAGGCTTCCCGAGTTAAAATGCCAGGTATGGT  995

seq1  GGCCTCATGATGAGGGTCCTCACAGGCCCGTTTCCTCTAGCTTAACAGGA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCATGATGAGGGTCCTCACAGGCCCGTTTCCTCTAGCTTAACAGGA  1045

seq1  AAGCACAACTACTCTCTCCTCGCCCCAAATGTTTGCCAAACTCAAGTGAA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACAACTACTCTCTCCTCGCCCCAAATGTTTGCCAAACTCAAGTGAA  1095

seq1  AGAATTAGGAGGGGAATTC  1114
      |||||||||||||||||||
seq2  AGAATTAGGAGGGGAATTC  1114

seq1: chr8_34756430_34757520
seq2: B6Ng01-307F20.g_66_1155

seq1  GAATTCTAGGTCTTGAGCGCACATGTGCATCCGTGCACACACACACACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGTCTTGAGCGCACATGTGCATCCGTGCACACACACACACAC  50

seq1  ACACACACACACACACACACACACAAAATCCTCTCTCATGGAAGTCAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACAAAATCCTCTCTCATGGAAGTCAGAA  100

seq1  GACAATTTGTAGGAGTTGGTTTTCTTTTTCCACCATCTTGGGCCTAGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATTTGTAGGAGTTGGTTTTCTTTTTCCACCATCTTGGGCCTAGGAA  150

seq1  TTAAACTCAGGCTGTCAAGAATTGACAGCAGGTCCCCTCAGTCCCCTCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACTCAGGCTGTCAAGAATTGACAGCAGGTCCCCTCAGTCCCCTCAG  200

seq1  CCATCTCACCAGCCCAGCTCTCACCAGCCCAGCTTTTACATTTTTTAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTCACCAGCCCAGCTCTCACCAGCCCAGCTTTTACATTTTTTAATA  250

seq1  ATTTAAGGAGCACTTCAGTGTTGGAGTACTTACTCAGAGTGTATTAAGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAGGAGCACTTCAGTGTTGGAGTACTTACTCAGAGTGTATTAAGCC  300

seq1  CTAGGTTCAATCTCTAGTACTGGAAAACTAAAACTAAAAAAACTGAATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTTCAATCTCTAGTACTGGAAAACTAAAACTAAAAAAACTGAATAT  350

seq1  AGTAATGTATGCTCATAATTCCCGCTTTTACAAGACTAAGGAAGATTGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATGTATGCTCATAATTCCCGCTTTTACAAGACTAAGGAAGATTGCC  400

seq1  ATAGGTTCAAAGCCACCTGGGTTACATGGTCTGTTTCAAGGCAGCCTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGTTCAAAGCCACCTGGGTTACATGGTCTGTTTCAAGGCAGCCTGAG  450

seq1  TTATAGTAAGTCTTTATATCGAAATACATGCATATGTCAGACATAATAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGTAAGTCTTTATATCGAAATACATGCATATGTCAGACATAATAGC  500

seq1  ACCTAACTTTAATCCCAGCACTGGGAAAGTAGAACAGAGAGATCTCTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAACTTTAATCCCAGCACTGGGAAAGTAGAACAGAGAGATCTCTGAA  550

seq1  TTTGAGGCCAGCCGGGACCACATAGCGAATTCCCAGGCTGCCACTAGTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGGCCAGCCGGGACCACATAGCGAATTCCCAGGCTGCCACTAGTGA  600

seq1  GACCTTGTCTCAGAAAAAGAAAAGAAAAAGCCACAAAAAATTCAGTCAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTGTCTCAGAAAAAGAAAAGAAAAAGCCACAAAAAATTCAGTCAAC  650

seq1  AAGTTGAAAGGGGAAGAAGGGGATGGCAAAGAGCAGGTAAATTCCAATCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGAAAGGGGAAGAAGGGGATGGCAAAGAGCAGGTAAATTCCAATCA  700

seq1  CTATGATGATGACCATGCAAAATCTTCAAAATACCAAGGAACTGTAAGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGATGATGACCATGCAAAATCTTCAAAATACCAAGGAACTGTAAGCA  750

seq1  AGGATAGGTTGGTTAA-GGGGGAGCTAGAAGGGAGAACCAGCTGAAAGTT  799
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AGGATAGGTTGGTTAAGGGGGGAGCTAGAAGGGAGAACCAGCTGAAAGTT  800

seq1  CATTTACAATGCAGGAAACCCCACAAAGCTCCCACTCTGAAAGTCTGCTC  849
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CATTTACAATGCAGGAAACCCCAC-AAGCTCCCACTCTGAAAGTCTGCTC  849

seq1  CTCTTGGCCCACAGAAAAGAGCTGAGATTTCTTG-TCTGGAAAGGCAGAA  898
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CTCTTGGCCCACAGAAAAGAGCTGAGATTTCTTGTTCTGGAAAGGCAGAA  899

seq1  GGAGAGCTCACTCAATTGGAGACAGGGAGGATGAGACGGCCCAGCCTTTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGCTCACTCAATTGGAGACAGGGAGGATGAGACGGCCCAGCCTTTA  949

seq1  CAGCTCAGCCAGTGAAGACTCGCTTGCTGCCAAGCCTGGTGACCTGGGTT  998
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CAGCTCAGCCAGTGAAGACTCGCTTGCTGCCCAGCCTGGTGACCTGGGTT  999

seq1  TGACC-TCCAGACCACAAGGAGGAAGGCGAAACCAACTCCCAAATGTGTT  1047
      ||||| |||||||||||  || ||||||||| | | ||||||| ||||||
seq2  TGACCTTCCAGACCACA--GAAGAAGGCGAACCAACCTCCCAATTGTGTT  1047

seq1  CTGCTCCCACACACTCACACATGGGTGTGCATTTCCACGTTGAA  1091
      |||||  |||||||||||   |||||||||||||||||||||||
seq2  CTGCT-TCACACACTCACCATTGGGTGTGCATTTCCACGTTGAA  1090