BAC Information

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BAC

Clone NameB6Ng01-308K07
Chromosome8 (Build37)
Map Location 18,907,550 - 18,908,685
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665638, LOC100040466, Mcph1, Angpt2, Agpat5, LOC100040486
Downstream geneXkr5, Defb40, Defb37, Defb38, Defb39, Defb12, Defb34, EG546038, Spag11, Defb14, Defb4, EG654452, Defb6, EG574081, Defb5, Defb3, Defb54-ps, LOC100040504, LOC100040514, Defb8, LOC100040528, LOC100041511, Defb7, LOC670326, LOC100040561, LOC624198, EG665730, 4930467E23Rik, LOC100041567, LOC547150
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-308K07.bB6Ng01-308K07.g
ACCGA101089GA101090
length1,1221,172
definitionB6Ng01-308K07.b B6Ng01-308K07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatgaggtactctcctacctctcgacacccagcccctctactcc
actaaccctgaatgtcctctggaccagctctgacacagttacatatactc
aaacagacctattcctacactcagacacataagcacacagtcatattcaa
acatacacagacataaatctacacactcaagcaaatactcagaaacacac
acatagacacacacagacacacatatagacacacccacacaaatgcaatt
aatactgtcagatagaacacacccgaacattcagacacagagatatatcc
ctgcatgagcatacatgttcaaataacccccaatcctctcactcaaagat
tgatacacacaaccagtcattaccctcaaatacacctacagtgacacact
tcacacatcaacacaagcatacattcacacactcagactccccccacctc
tgtatacattcacacacattaacacataaacattcctaagcatactcctt
gacatatacaaaacacaaacacttgtacacacactcagagatatggagca
cagaaataatgcttgtaccaccagctatggggtgggggtatccctagccg
agtctagtaccacataaatcgaccttctccctgtagcaatccaaagggaa
tatttatatgtccatcacctacactcccctctgtgcctgcatccccatct
ctgctcctgtggagcatcagccgaggctccttgcttagccccaccccgca
tcacctgtgtgccttcacttttcaactgccaggctttcctttgcattacc
agattcccatttctttgggctccatcctacctggatattaaaaacaccta
ctgggagtagtggctcacatctacaatcctggcacttcaaaggctgggtc
agaggactcttgtgagttcaaggtcagcctgagctacagaaaaagatttc
tagcaataaactaacctacctcccattcacccaccatcacaccacacaac
cacaatcacacacacacaccgacaataacagcattaacccagaacaaagt
ccaagccaagctttttatttattttttactcaactactattggtctgctc
tacttaccagaaattcaactga
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggagaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactactggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatatggtatatttacacaatg
gagtactactcagctattaaaaacaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcgcacaatatgtactcattgataagtggatattagcccaaaacc
taggatacccaagatataagatataatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgcccggggcctagcaaa
cacataagtggatgctcacagtcagctaatggatggatcacaggctccca
atggaggagctagagaaagtacccaaggagctaaagggatctgcaaccct
ataggtggaacacattatgaactaaccagtacccccgagcctgactctag
ctgcatatgtatcaaagatgcctagtcgcatcactggaaagagaggctca
ttgactcgctaacttaaatgccgacaggacgccagtctaaaaggggatgg
gcgcggatatgggggaaatgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_18907550_18908685
seq2: B6Ng01-308K07.b_47_1168

seq1  GAATTCCATGAGGTACTCTCCTACCTCTCGACACCCAGCCCCTCTACTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGAGGTACTCTCCTACCTCTCGACACCCAGCCCCTCTACTCC  50

seq1  ACTAACCCTGAATGTCCTCTGGACCAGCTCTGACACAGTTACATATACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACCCTGAATGTCCTCTGGACCAGCTCTGACACAGTTACATATACTC  100

seq1  AAACAGACCTATTCCTACACTCAGACACATAAGCACACAGTCATATTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGACCTATTCCTACACTCAGACACATAAGCACACAGTCATATTCAA  150

seq1  ACATACACAGACATAAATCTACACACTCAAGCAAATACTCAGAAACACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACACAGACATAAATCTACACACTCAAGCAAATACTCAGAAACACAC  200

seq1  ACATAGACACACACAGACACACATATAGACACACCCACACAAATGCAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGACACACACAGACACACATATAGACACACCCACACAAATGCAATT  250

seq1  AATACTGTCAGATAGAACACACCCGAACATTCAGACACAGAGATATATCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTGTCAGATAGAACACACCCGAACATTCAGACACAGAGATATATCC  300

seq1  CTGCATGAGCATACATGTTCAAATAACCCCCAATCCTCTCACTCAAAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATGAGCATACATGTTCAAATAACCCCCAATCCTCTCACTCAAAGAT  350

seq1  TGATACACACAACCAGTCATTACCCTCAAATACACCTACAGTGACACACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACACACAACCAGTCATTACCCTCAAATACACCTACAGTGACACACT  400

seq1  TCACACATCAACACAAGCATACATTCACACACTCAGACTCCCCCCACCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACATCAACACAAGCATACATTCACACACTCAGACTCCCCCCACCTC  450

seq1  TGTATACATTCACACACATTAACACATAAACATTCCTAAGCATACTCCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATACATTCACACACATTAACACATAAACATTCCTAAGCATACTCCTT  500

seq1  GACATATACAAAACACAAACACTTGTACACACACTCAGAGATATGGAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATATACAAAACACAAACACTTGTACACACACTCAGAGATATGGAGCA  550

seq1  CAGAAATAATGCTTGTACCACCAGCTATGGGGTGGGGGTATCCCTAGCCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATAATGCTTGTACCACCAGCTATGGGGTGGGGGTATCCCTAGCCG  600

seq1  AGTCTAGTACCACATAAATCGACCTTCTCCCTGTAGCAATCCAAAGGGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTAGTACCACATAAATCGACCTTCTCCCTGTAGCAATCCAAAGGGAA  650

seq1  TATTTATATGTCCATCACCTACACTCCCCTCTGTGCCTGCATCCCCATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATATGTCCATCACCTACACTCCCCTCTGTGCCTGCATCCCCATCT  700

seq1  CTGCTCCTGTGGAGCATCAGCCGAGGCTCCTTGCTTAGCCCCACCCCGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCCTGTGGAGCATCAGCCGAGGCTCCTTGCTTAGCCCCACCCCGCA  750

seq1  TCACCTGTGTGCCTTCACTTTTCAACTGCCAGGCTTTCCTTTGCATTACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTGTGTGCCTTCACTTTTCAACTGCCAGGCTTTCCTTTGCATTACC  800

seq1  AGATTCCCATTTCTTTGGGCTCCATCCTACCTGGATATTAAAAACACCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCCCATTTCTTTGGGCTCCATCCTACCTGGATATTAAAAACACCTA  850

seq1  CTGGGAGTAGTGGCTCACATCTACAATCCTGGCACTTCAAAGGCTGGGTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAGTAGTGGCTCACATCTACAATCCTGGCACTTCAAAGGCTGGGTC  900

seq1  AGGAGGACTCTTGTGAGTTCAAGGTCAGCCTGAGCTACAGAAAAAGATTT  950
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  A-GAGGACTCTTGTGAGTTCAAGGTCAGCCTGAGCTACAGAAAAAGATTT  949

seq1  CTAGCAATAAACTAACCTACCTCCCATTCACCCACCATCACCACCACCAC  1000
      |||||||||||||||||||||||||||||||||||||||| ||||| |||
seq2  CTAGCAATAAACTAACCTACCTCCCATTCACCCACCATCA-CACCA-CAC  997

seq1  AACCACAATCACAACCACAACCACCACCGACAATAACAGCATTAAACCCA  1050
      |||||||||||||  ||||     ||||||||||||||||||| ||||||
seq2  AACCACAATCACACACACA-----CACCGACAATAACAGCATT-AACCCA  1041

seq1  GAACAAAGTCCAAAGCCCAAGC-TTTTATTTATTTTTTACTTCAAACTAC  1099
      |||||||||||||   |||||| ||||||||||||||||||   ||||||
seq2  GAACAAAGTCCAA--GCCAAGCTTTTTATTTATTTTTTACT--CAACTAC  1087

seq1  TATGGGTCTGCTTCTACTTTACCCAGAATTCATCTGA  1136
      ||| ||||||| ||||| |||||   |||||| ||||
seq2  TATTGGTCTGC-TCTAC-TTACCAGAAATTCAACTGA  1122