BAC Information

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BAC

Clone NameB6Ng01-309J04
Chromosome8 (Build37)
Map Location 68,666,220 - 68,835,347
singlet/doubletdoublet
Overlap geneMarch1
Upstream geneLOC665396, LOC100040949, LOC665405, Vaultrc-ps1, LOC100040967, LOC100040986
Downstream gene1810029B16Rik, Tktl2, Npy5r, Npy1r, BC053440, LOC665453
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-309J04.bB6Ng01-309J04.g
ACCGA101781GA101782
length1,014951
definitionB6Ng01-309J04.b B6Ng01-309J04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,666,220 - 68,667,086)(68,834,756 - 68,835,347)
sequence
gaattcattgtttctaatagctgaataaaattccattttgtaaatgtacc
atagtttctgtatgcattcctctgttgaaggacatctgggttgtttccaa
cttctggctattataaataaggttgctgtgaacatagtggagcatgtgtt
cttgttatatgttggagcatcttctggatattcccaggagtggtatacat
gggtcctcaggtaaaactatatccagttttctaaggaacctccatactga
tttccagagtggttgtaccagcttacaatcccagcttattttaaaatgag
aattagaaattattaagcttattatagaagatgccaaaaagcaaaacggc
ttccttttcattaattatttaattattttttactttacatccattcatag
ttcctttctctcctgtcctcccagtcccatccttaaattctctcctcaca
ttaccctctactcttctcctcagagaaggggaagacacccttggtaactg
tcctaccctgggatgtcagtcccagcaggactgtacatctctcccactga
ggcccaacaaggtagtccagttaagataagggaaaataatggctgccaac
agagtcagaggcagcccccactccaattgttaggtgaagaacaagctgca
tatctactctaaatgagcagagagcctaggcccaattcccatgggcacag
gttagttgattctgtagtcttcttgtggtgtccttgacccctatggcttg
cccaattgtatccctcactcttccataagattccttgaggtccatccaat
gtttggctatgagtctctacatcttcctccatccactgctatatgaagcc
tctcaggagacagttatgctaagttcctgtctgcaagcactgcagagaat
cattaataatgtcatgggttggctttctggatggatctcagttggggcag
tcattggcttgctgttccctctgctccatctttatccttgcacatctcat
agcagacaaatttt
gaattcaaatgaccttctcttgtttaccaaaataagatttccaaattctt
tcttacaaccaccacattttttttctccagtcacttaaaaaaaaaaaaca
aacctctttcatgttatattttaaaggacatcatcaaatattatatttaa
tgggctggagccatgggtatcttcatgtgaaaataataattatatatatt
taagtgaatgccaactgatgttaggatgcatgtgaacattgtaaaatctt
ttaattatgctaaatattttcaattattttgtggtaaaaacatcccaacc
tattgtgctatatctttaattagaaagtacattataatcattatccattg
tcactttactgtgcacactatactttttgccctaaactgcatttctgttt
tcactgatccagcttctgtcacctcttcaccacccatcctttcaccccct
tccccaatcttcctgttaatcgccatttctttggaaggttctacaggatc
agcattttaagagtccacttgtaagtgggaccatgtggtatttgcttttc
tgtggctggcttatttcaatttacataaccacttccatggttatttaccc
ttctgggtatcacgctggagaaaagcccaacagaggcctgtgggacagat
tgatattttaggctgcagatacttaactactgaagtccttgcatagttaa
atagccaggttctcttactagtttggtttgatatttttagggtcaactac
tcaatcacagctttgttttctaatttctaaatcataagtctatctaaaaa
ggttactgtcaggagccgaggagatggctcagtagttaaaaatgttttct
gtgcaagcacagagtctgaactcacatcttgaggacccaggtaaatgcca
agtgagtgtggctgcctgtctgtctgtaatttagttttgagaggtagaga
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_68666220_68667086
seq2: B6Ng01-309J04.b_45_911

seq1  GAATTCATTGTTTCTAATAGCTGAATAAAATTCCATTTTGTAAATGTACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGTTTCTAATAGCTGAATAAAATTCCATTTTGTAAATGTACC  50

seq1  ATAGTTTCTGTATGCATTCCTCTGTTGAAGGACATCTGGGTTGTTTCCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTTCTGTATGCATTCCTCTGTTGAAGGACATCTGGGTTGTTTCCAA  100

seq1  CTTCTGGCTATTATAAATAAGGTTGCTGTGAACATAGTGGAGCATGTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGGCTATTATAAATAAGGTTGCTGTGAACATAGTGGAGCATGTGTT  150

seq1  CTTGTTATATGTTGGAGCATCTTCTGGATATTCCCAGGAGTGGTATACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTATATGTTGGAGCATCTTCTGGATATTCCCAGGAGTGGTATACAT  200

seq1  GGGTCCTCAGGTAAAACTATATCCAGTTTTCTAAGGAACCTCCATACTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCCTCAGGTAAAACTATATCCAGTTTTCTAAGGAACCTCCATACTGA  250

seq1  TTTCCAGAGTGGTTGTACCAGCTTACAATCCCAGCTTATTTTAAAATGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGAGTGGTTGTACCAGCTTACAATCCCAGCTTATTTTAAAATGAG  300

seq1  AATTAGAAATTATTAAGCTTATTATAGAAGATGCCAAAAAGCAAAACGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGAAATTATTAAGCTTATTATAGAAGATGCCAAAAAGCAAAACGGC  350

seq1  TTCCTTTTCATTAATTATTTAATTATTTTTTACTTTACATCCATTCATAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTTCATTAATTATTTAATTATTTTTTACTTTACATCCATTCATAG  400

seq1  TTCCTTTCTCTCCTGTCCTCCCAGTCCCATCCTTAAATTCTCTCCTCACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTCTCTCCTGTCCTCCCAGTCCCATCCTTAAATTCTCTCCTCACA  450

seq1  TTACCCTCTACTCTTCTCCTCAGAGAAGGGGAAGACACCCTTGGTAACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCCTCTACTCTTCTCCTCAGAGAAGGGGAAGACACCCTTGGTAACTG  500

seq1  TCCTACCCTGGGATGTCAGTCCCAGCAGGACTGTACATCTCTCCCACTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTACCCTGGGATGTCAGTCCCAGCAGGACTGTACATCTCTCCCACTGA  550

seq1  GGCCCAACAAGGTAGTCCAGTTAAGATAAGGGAAAATAATGGCTGCCAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCAACAAGGTAGTCCAGTTAAGATAAGGGAAAATAATGGCTGCCAAC  600

seq1  AGAGTCAGAGGCAGCCCCCACTCCAATTGTTAGGTGAAGAACAAGCTGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCAGAGGCAGCCCCCACTCCAATTGTTAGGTGAAGAACAAGCTGCA  650

seq1  TATCTACTCTAAATGAGCAGAGAGCCTAGGCCCAATTCCCATGGGCACAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTACTCTAAATGAGCAGAGAGCCTAGGCCCAATTCCCATGGGCACAG  700

seq1  GTTAGTTGATTCTGTAGTCTTCTTGTGGTGTCCTTGACCCCTATGGCTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGTTGATTCTGTAGTCTTCTTGTGGTGTCCTTGACCCCTATGGCTTG  750

seq1  CCCAATTGTATCCCTCACTCTTCCATAAGATTCCTTGAGGTCCATCCAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAATTGTATCCCTCACTCTTCCATAAGATTCCTTGAGGTCCATCCAAT  800

seq1  GTTTGGCTATGAGTCTCTACATCTTCCTCCATCCACTGCTATATGAAGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGCTATGAGTCTCTACATCTTCCTCCATCCACTGCTATATGAAGCC  850

seq1  TCTCAGGAGACAGTTAT  867
      |||||||||||||||||
seq2  TCTCAGGAGACAGTTAT  867

seq1: chr8_68834756_68835347
seq2: B6Ng01-309J04.g_66_657 (reverse)

seq1  AACCATGGAAGTGGTTATGTAAATTGAAATAAGCCAGCCACAGAAAAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATGGAAGTGGTTATGTAAATTGAAATAAGCCAGCCACAGAAAAGCA  50

seq1  AATACCACATGGTCCCACTTACAAGTGGACTCTTAAAATGCTGATCCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCACATGGTCCCACTTACAAGTGGACTCTTAAAATGCTGATCCTGT  100

seq1  AGAACCTTCCAAAGAAATGGCGATTAACAGGAAGATTGGGGAAGGGGGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCTTCCAAAGAAATGGCGATTAACAGGAAGATTGGGGAAGGGGGTG  150

seq1  AAAGGATGGGTGGTGAAGAGGTGACAGAAGCTGGATCAGTGAAAACAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGATGGGTGGTGAAGAGGTGACAGAAGCTGGATCAGTGAAAACAGAA  200

seq1  ATGCAGTTTAGGGCAAAAAGTATAGTGTGCACAGTAAAGTGACAATGGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGTTTAGGGCAAAAAGTATAGTGTGCACAGTAAAGTGACAATGGAT  250

seq1  AATGATTATAATGTACTTTCTAATTAAAGATATAGCACAATAGGTTGGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATTATAATGTACTTTCTAATTAAAGATATAGCACAATAGGTTGGGA  300

seq1  TGTTTTTACCACAAAATAATTGAAAATATTTAGCATAATTAAAAGATTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTACCACAAAATAATTGAAAATATTTAGCATAATTAAAAGATTTT  350

seq1  ACAATGTTCACATGCATCCTAACATCAGTTGGCATTCACTTAAATATATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGTTCACATGCATCCTAACATCAGTTGGCATTCACTTAAATATATA  400

seq1  TAATTATTATTTTCACATGAAGATACCCATGGCTCCAGCCCATTAAATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATTATTTTCACATGAAGATACCCATGGCTCCAGCCCATTAAATAT  450

seq1  AATATTTGATGATGTCCTTTAAAATATAACATGAAAGAGGTTTGTTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTGATGATGTCCTTTAAAATATAACATGAAAGAGGTTTGTTTTTT  500

seq1  TTTTTTAAGTGACTGGAGAAAAAAAATGTGGTGGTTGTAAGAAAGAATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAAGTGACTGGAGAAAAAAAATGTGGTGGTTGTAAGAAAGAATTT  550

seq1  GGAAATCTTATTTTGGTAAACAAGAGAAGGTCATTTGAATTC  592
      ||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATCTTATTTTGGTAAACAAGAGAAGGTCATTTGAATTC  592