BAC Information

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BAC

Clone NameB6Ng01-310F13
Chromosome8 (Build37)
Map Location 10,484,139 - 10,628,177
singlet/doubletdoublet
Overlap geneMyo16
Upstream geneTmem28, Lig4, Abhd13, Tnfsf13b
Downstream geneLOC100040008, LOC384782, LOC100040507, LOC665306, Irs2, Col4a1, Col4a2, Rab20, 0710008K08Rik, Cars2, Ing1, Ankrd10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-310F13.bB6Ng01-310F13.g
ACCGA102347GA102348
length1,2101,133
definitionB6Ng01-310F13.b B6Ng01-310F13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(10,626,975 - 10,628,177)(10,484,139 - 10,485,264)
sequence
gaattcacccatctataagacagaggtcaccctacttcatcttcctcttt
ggaaggttgcacagaactgtcattagcattgacagacaggaggcaactgt
tataccaaggcatagacagagacaccattaaacctttggagcccatggat
cggtcctctgctctatacacagctcgtggcctgatttgaggagattccat
ggacgcctttctgtgatacccacagtgtagacagagcagctaggcaagag
agatctgttttcctatcactctgcttttaaccatctgtgttggtgaggtt
gccatggtagaaggcttgcagagggtctgtgtgttgaatggggatgacca
gctgagcaacaggaaaagggaaataacgcagactataactgtgaccctga
acttcactccttacagggaccttaaagacatggtagatgtggaactggag
ctgagctaggcctgaaggtctgccctatggagagcagcactgggctagat
gttcaatgtggccctagatcttggtcatagaatatagctcacaatcattt
aaccagtaagaaccagtcgaggggtgggtgactgacatgtgagaacaggc
atgaaggaggagtagctgtggaggcttcacgttgacttgatgacgtcccc
tagaattgctgaaggagtcctgatgcccaaattaaataccattcgatgaa
agagcttctctcagtgagtgaccccgaggcatggccctgagtctcccctt
tgttatgaaagaaaagttccccagatgccgagccatgctgaagtcagtgt
aaatgatttaggtgtagttgttcacagatgtgatttaaaaccaaggagag
cagtacatgctgaggaaagaggctttgagcagttctcatgttttaatttc
aggtgtcaaatacaatactgtaaccatatatgttagcatcaggacttcct
aacctatgacaatcacaataagtgacagtgcagcctgcagcatattccag
aatccacttggctcacctcccactttacctgtgttaacatcattttctaa
ataaaataagagaaacaactcggccccttcttcctcttcttctctttctg
ccaacaacattgtcactcccaataaaagctctttcacataggaaactgtc
ttggatctaatgtgcgttgagatgcaaactgcattctagcaacacatcaa
ttatatgcac
gaattcacagataccttatattcaaacctcagtgccctgcttataatttt
ggcgagaaacagaacaaacacagcagcccaccaggggtcaaggtccttga
gacaaactgagtagaaagctgcagccgtgcatgaaaaggagccaggcgta
tttgcctttcctgaaaatgatcatttatttattttgctaagccagtcttc
acatatattctggcgtgatatattgaattcacaagtatgtctgcaaagtt
ctgcatttttatcatctgttaatcctaaccacttctccgaggatattttg
catcttgtaaataacaggatgcagggagggagtagggacgtgaaggctgt
gcagatttacttctgtcccataaatattgatgatcttctgagtgccaagc
tgggggacacttataactcagtgtcctgggaagatggctacccaaatacg
tgatctggctgcctctcttgggagcttcagaccttcaaagggctccctac
caccttctaaatactcactttttcttagctcattctgaaagcaaaatcga
ttaaaaaataatttccatttttataccacttttaacttttagcgaaaaag
gaactctaagggtaagctgaatatctctcatccaaaatgcctgagatcaa
ggcatttccaggttcatatatgtttcagattttaaaattgcacatagaat
ttactagttgagaaactgtaatatcaaaaattcaagatgtaaaatgtttt
aatttttcttaattcttgaaatttttgtattttgatcatattcactccta
cccacccaactttgtgttctcgctgtctctctgtctctccctcccttcct
tcattcctccctctctccctttcctccatcttccatatccagaagagtct
tgtttgtgttagcaaaccattcttagctgctgggcctactctggagtgtg
gtggacattattgggagatcaatagcattgaagaaaactgattcttgttt
ccctcagaatccatcaaatgtcaatagctcctcagtcaagagcgactgcg
ggccatagggtaaggcattctatggagagccttgcaggagtctgcctctg
aatgagggaatctcatgagacaccttcgttctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_10626975_10628177
seq2: B6Ng01-310F13.b_46_1255 (reverse)

seq1  GTGCATAT-ATTGATGTGT---TAGAATGGCAGGTCGCATCTCAACAGCA  46
      |||||||| ||||||||||   |||||| |||| | |||||||||| |||
seq2  GTGCATATAATTGATGTGTTGCTAGAAT-GCAGTTTGCATCTCAAC-GCA  48

seq1  CACTAGA-CCAAGACAGTT--CTATGTGGAAGAGGTTTTATTGGGAGTGA  93
      || |||| |||||||||||  ||||||| ||||| |||||||||||||||
seq2  CATTAGATCCAAGACAGTTTCCTATGTGAAAGAGCTTTTATTGGGAGTGA  98

seq1  CAA-GGTGGTGGCAGAAAGAGAAGAGGAGG-AGAGGGGGCCGGGGTTGTT  141
      ||| | || |||||||||||||||| |||| ||| ||||||| | |  ||
seq2  CAATGTTGTTGGCAGAAAGAGAAGAAGAGGAAGAAGGGGCCGAGTTGTTT  148

seq1  CTCCTTATTTATATAGAAAATGATG-TAACACAGGTAAAGGTGGGAGGTG  190
      ||| |  ||||| |||||||||||| ||||||||||||| ||||||||||
seq2  CTCTTATTTTATTTAGAAAATGATGTTAACACAGGTAAA-GTGGGAGGTG  197

seq1  AGCCAAGTGGATTCTGGGAATATGCTGCAGGCTGCACTGTCACTTA-TGT  239
      ||||||||||||||| |||||||||||||||||||||||||||||| |||
seq2  AGCCAAGTGGATTCT-GGAATATGCTGCAGGCTGCACTGTCACTTATTGT  246

seq1  GA-TGTCATAGGTTTAGGAAGTCCTGATGCTAACATATATGGTTACAGTA  288
      || ||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GATTGTCATAGG-TTAGGAAGTCCTGATGCTAACATATATGGTTACAGTA  295

seq1  TTGTATTTGACACCTGAAATTAAAACATGAGAACTGCTCAAAGCCTCTTT  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATTTGACACCTGAAATTAAAACATGAGAACTGCTCAAAGCCTCTTT  345

seq1  CCTCAGCATGTACTGCTCTCCTTGGTTTTAAATCACATCTGTGAACAACT  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGCATGTACTGCTCTCCTTGGTTTTAAATCACATCTGTGAACAACT  395

seq1  ACACCTAAATCATTTACACTGACTTCAGCATGGCTCGGCATCTGGGGAAC  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTAAATCATTTACACTGACTTCAGCATGGCTCGGCATCTGGGGAAC  445

seq1  TTTTCTTTCATAACAAAGGGGAGACTCAGGGCCATGCCTCGGGGTCACTC  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTCATAACAAAGGGGAGACTCAGGGCCATGCCTCGGGGTCACTC  495

seq1  ACTGAGAGAAGCTCTTTCATCGAATGGTATTTAATTTGGGCATCAGGACT  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGAGAAGCTCTTTCATCGAATGGTATTTAATTTGGGCATCAGGACT  545

seq1  CCTTCAGCAATTCTAGGGGACGTCATCAAGTCAACGTGAAGCCTCCACAG  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAGCAATTCTAGGGGACGTCATCAAGTCAACGTGAAGCCTCCACAG  595

seq1  CTACTCCTCCTTCATGCCTGTTCTCACATGTCAGTCACCCACCCCTCGAC  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTCCTCCTTCATGCCTGTTCTCACATGTCAGTCACCCACCCCTCGAC  645

seq1  TGGTTCTTACTGGTTAAATGATTGTGAGCTATATTCTATGACCAAGATCT  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCTTACTGGTTAAATGATTGTGAGCTATATTCTATGACCAAGATCT  695

seq1  AGGGCCACATTGAACATCTAGCCCAGTGCTGCTCTCCATAGGGCAGACCT  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCCACATTGAACATCTAGCCCAGTGCTGCTCTCCATAGGGCAGACCT  745

seq1  TCAGGCCTAGCTCAGCTCCAGTTCCACATCTACCATGTCTTTAAGGTCCC  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCCTAGCTCAGCTCCAGTTCCACATCTACCATGTCTTTAAGGTCCC  795

seq1  TGTAAGGAGTGAAGTTCAGGGTCACAGTTATAGTCTGCGTTATTTCCCTT  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGGAGTGAAGTTCAGGGTCACAGTTATAGTCTGCGTTATTTCCCTT  845

seq1  TTCCTGTTGCTCAGCTGGTCATCCCCATTCAACACACAGACCCTCTGCAA  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGTTGCTCAGCTGGTCATCCCCATTCAACACACAGACCCTCTGCAA  895

seq1  GCCTTCTACCATGGCAACCTCACCAACACAGATGGTTAAAAGCAGAGTGA  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCTACCATGGCAACCTCACCAACACAGATGGTTAAAAGCAGAGTGA  945

seq1  TAGGAAAACAGATCTCTCTTGCCTAGCTGCTCTGTCTACACTGTGGGTAT  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAAACAGATCTCTCTTGCCTAGCTGCTCTGTCTACACTGTGGGTAT  995

seq1  CACAGAAAGGCGTCCATGGAATCTCCTCAAATCAGGCCACGAGCTGTGTA  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAAAGGCGTCCATGGAATCTCCTCAAATCAGGCCACGAGCTGTGTA  1045

seq1  TAGAGCAGAGGACCGATCCATGGGCTCCAAAGGTTTAATGGTGTCTCTGT  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGCAGAGGACCGATCCATGGGCTCCAAAGGTTTAATGGTGTCTCTGT  1095

seq1  CTATGCCTTGGTATAACAGTTGCCTCCTGTCTGTCAATGCTAATGACAGT  1138
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGCCTTGGTATAACAGTTGCCTCCTGTCTGTCAATGCTAATGACAGT  1145

seq1  TCTGTGCAACCTTCCAAAGAGGAAGATGAAGTAGGGTGACCTCTGTCTTA  1188
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGCAACCTTCCAAAGAGGAAGATGAAGTAGGGTGACCTCTGTCTTA  1195

seq1  TAGATGGGTGAATTC  1203
      |||||||||||||||
seq2  TAGATGGGTGAATTC  1210

seq1: chr8_10484139_10485264
seq2: B6Ng01-310F13.g_66_1198

seq1  GAATTCACAGATACCTTATATTCAAACCTCAGTGCCCTGCTTATAATTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGATACCTTATATTCAAACCTCAGTGCCCTGCTTATAATTTT  50

seq1  GGCGAGAAACAGAACAAACACAGCAGCCCACCAGGGGTCAAGGTCCTTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGAGAAACAGAACAAACACAGCAGCCCACCAGGGGTCAAGGTCCTTGA  100

seq1  GACAAACTGAGTAGAAAGCTGCAGCCGTGCATGAAAAGGAGCCAGGCGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAACTGAGTAGAAAGCTGCAGCCGTGCATGAAAAGGAGCCAGGCGTA  150

seq1  TTTGCCTTTCCTGAAAATGATCATTTATTTATTTTGCTAAGCCAGTCTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCTTTCCTGAAAATGATCATTTATTTATTTTGCTAAGCCAGTCTTC  200

seq1  ACATATATTCTGGCGTGATATATTGAATTCACAAGTATGTCTGCAAAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATATTCTGGCGTGATATATTGAATTCACAAGTATGTCTGCAAAGTT  250

seq1  CTGCATTTTTATCATCTGTTAATCCTAACCACTTCTCCGAGGATATTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATTTTTATCATCTGTTAATCCTAACCACTTCTCCGAGGATATTTTG  300

seq1  CATCTTGTAAATAACAGGATGCAGGGAGGGAGTAGGGACGTGAAGGCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTGTAAATAACAGGATGCAGGGAGGGAGTAGGGACGTGAAGGCTGT  350

seq1  GCAGATTTACTTCTGTCCCATAAATATTGATGATCTTCTGAGTGCCAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATTTACTTCTGTCCCATAAATATTGATGATCTTCTGAGTGCCAAGC  400

seq1  TGGGGGACACTTATAACTCAGTGTCCTGGGAAGATGGCTACCCAAATACG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGACACTTATAACTCAGTGTCCTGGGAAGATGGCTACCCAAATACG  450

seq1  TGATCTGGCTGCCTCTCTTGGGAGCTTCAGACCTTCAAAGGGCTCCCTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTGGCTGCCTCTCTTGGGAGCTTCAGACCTTCAAAGGGCTCCCTAC  500

seq1  CACCTTCTAAATACTCACTTTTTCTTAGCTCATTCTGAAAGCAAAATCGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTCTAAATACTCACTTTTTCTTAGCTCATTCTGAAAGCAAAATCGA  550

seq1  TTAAAAAATAATTTCCATTTTTATACCACTTTTAACTTTTAGCGAAAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAATAATTTCCATTTTTATACCACTTTTAACTTTTAGCGAAAAAG  600

seq1  GAACTCTAAGGGTAAGCTGAATATCTCTCATCCAAAATGCCTGAGATCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCTAAGGGTAAGCTGAATATCTCTCATCCAAAATGCCTGAGATCAA  650

seq1  GGCATTTCCAGGTTCATATATGTTTCAGATTTTAAAATTGCACATAGAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTTCCAGGTTCATATATGTTTCAGATTTTAAAATTGCACATAGAAT  700

seq1  TTACTAGTTGAGAAACTGTAATATCAAAAATTCAAGATGTAAAATGTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTAGTTGAGAAACTGTAATATCAAAAATTCAAGATGTAAAATGTTTT  750

seq1  AATTTTTCTTAATTCTTGAAATTTTTGTATTTTGATCATATTCACTCCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTCTTAATTCTTGAAATTTTTGTATTTTGATCATATTCACTCCTA  800

seq1  CCCACCCAACTTTGTGTTCTCGCTGTCTCTCTGTCTCTCCCTCCCTTCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCCAACTTTGTGTTCTCGCTGTCTCTCTGTCTCTCCCTCCCTTCCT  850

seq1  TCATTCCTCCCTCTCTCCC-TTCCTCCATCTTCCATATCCAGAAGAGTCT  899
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TCATTCCTCCCTCTCTCCCTTTCCTCCATCTTCCATATCCAGAAGAGTCT  900

seq1  TGTTTGTGTTAGCAAACCATTCTTAGCTGCTGGGCCTACTCTGGAGTGTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTGTTAGCAAACCATTCTTAGCTGCTGGGCCTACTCTGGAGTGTG  950

seq1  GTGGACA-TATT-GGAGATCAATAGCATTGAAGAAAACTGATTCTTG-TT  996
      ||||||| |||| |||||||||||||||||||||||||||||||||| ||
seq2  GTGGACATTATTGGGAGATCAATAGCATTGAAGAAAACTGATTCTTGTTT  1000

seq1  CCCTCAGAATCCATCAAATGTCAATAGCTCCTCAGTCAGGAGCGACTGCG  1046
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CCCTCAGAATCCATCAAATGTCAATAGCTCCTCAGTCAAGAGCGACTGCG  1050

seq1  AGCCATA-GGTAAGGCA-TCTAT-GAGAGCCTTGCAAGAGTCTGCTCCTG  1093
       |||||| ||||||||| ||||| |||||||||||| ||||||||  |||
seq2  GGCCATAGGGTAAGGCATTCTATGGAGAGCCTTGCAGGAGTCTGCCTCTG  1100

seq1  -ATGAGGGAATCTCATGAGACAACCTCCGTTCTC  1126
       |||||||||||||||||||| |||| |||||||
seq2  AATGAGGGAATCTCATGAGAC-ACCTTCGTTCTC  1133