BAC Information

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BAC

Clone NameB6Ng01-312I15
Chromosome8 (Build37)
Map Location 55,998,580 - 56,117,336
singlet/doubletdoublet
Overlap geneGpm6a
Upstream geneVegfc, Spcs3, Asb5, Spata4, Wdr17
Downstream geneLOC667624, LOC100040156, LOC100040382, LOC100040392, EG546212
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-312I15.bB6Ng01-312I15.g
ACCGA103983GA103984
length1,1191,106
definitionB6Ng01-312I15.b B6Ng01-312I15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(56,116,217 - 56,117,336)(55,998,580 - 55,999,702)
sequence
gaattcttttctttaatagaagacaaaatggcaaaaaaaaaaaaaatcta
taccaaggtaaaccactaagacaaagacggaaattggataaatagcaata
taggggatttaaggaagaagcagccttcattaccaagtgtgagatgtgtc
aataagaagggtaaaagagaggttgaaatttcatagaacagttaatatga
aacagttgcctgaaagttgagatgataagctcccagctactcagggacca
tgaagttgccttttgatgattgcctgcccagtggtctaaagcccgttcac
taaagctgcggggcagcatgctaaaacctagaagcccctgaggcctgatg
cggaattatgttgctccaaggagtcttcaaatttcaaaaggaagaccaca
gaaatcaatttgtgtattagacaaatctcagtaatcgatggcggtcttag
cattatcttcagaagtgggaaatgagagattattggctcaagttaaaata
ttaataaacatatacatccttcacctcttttaaaagtgccacttcagttt
ccagtttagcctttgcattttaacagaatagagcccagctaattttctcc
tatcatattatagatggaaatgcatcccttggtggcactgagagatcctt
gacaggaattcacagggctaagcttcttccatatgctcattccttttgca
tacctggcctaatgtcagggagaatgaatcactatttgaattgtaagtga
aagttttcttgagtgtctattagttctatatactttttatgtagaaatga
ttaaaattattgttatttggatgctacttgttcctacatgttactgagct
gaaaatttaaacatttaatgctgtttcagaaatttcaataaacatcacat
caaaatgaatgttatttagtatatctcatgatcacaatattatttagtaa
atcagaatcactgacattaggcttcaatgtaaaagggaccctaatattag
tggatattatgactccttataagtagacggtatttgaaatatgaacaaaa
aatagtttcaacagtatactagattattacccaaataattaaaatcaaac
atatttgtctttaacatta

gaattctgggcaaacattgctgttaccataaggaaggaacgctatttttc
caaaataattcttaagtatttttttgtatgctaagcccaaatcttcaaca
ttttcctttccagaactgagtatatttatctcatatcatagaattccata
gatttcttttaattttaaaaaattattatagtgacatttatatttataaa
caatactcattaactaaaattaatatgattaccagattttttaaatgatt
aattgagttatagttataggagatataacgtattttttgcatgaaatgct
ttatattttatttttgcatctatcagaacaagtataaaacctgcttgcaa
ttattagcagagagtagcttgtcccccttctggctaaaggggtacaaact
gccttcatttgttcacatgtcattagaatttagcatgtatataaagagtt
acagcttttctgagctatatttgagatgactgaatgttttcacaacacat
tgcagaggtgtactgaccctttaatgctctctttctgttgtcatggaaat
aagatttttgagtaggtttatctgccgtgctttgctttttatagactaat
ttccagttgattttggacaagtgttcttagccttcaaataaaaacactaa
actttacaatcttttaaaatttttctcccaataaggtttttaaaatcctg
aagattgggcattttaagatatccattagtgtacattagatatgtatgtt
aattattggctcaaaaaaagcaaagatgcttcttaaaatgaggacaataa
aaacaatctccaactccaattttagtttttaaaaatcatattgctcttag
tttaatattgttaatataaatcaactaacatatgtattttgaaacatgaa
taatgtcttacagttttgtcagccacagagtcaaatggcgcttatggtct
gacatcagactgtagctatggtagtgtcacccccctcttttattctgacc
aggtctctctgaggaaacactctggtggtgatactgcactactagataaa
ctgccatctcagaccctactatctgtctcaaatccattgctgtatagtaa
atattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_56116217_56117336
seq2: B6Ng01-312I15.b_47_1165 (reverse)

seq1  TAATGTTAAAGAC-AATATGTTTGAATTTTTAATTATTTGAGTTATAATC  49
      ||||||||||||| |||||||||||  ||||||||||||| || ||||||
seq2  TAATGTTAAAGACAAATATGTTTGA--TTTTAATTATTTGGGTAATAATC  48

seq1  TAGTATACTGTTTGAACTA-TTTTTGTTCATATTTCAATTACCGTCTACT  98
      ||||||||||||  ||||| |||||||||||||||||| |||||||||| 
seq2  TAGTATACTGTTGAAACTATTTTTTGTTCATATTTCAAATACCGTCTAC-  97

seq1  TTATAAGGAGTCAT-ATATCCACTAATATTAGGGTCCTTTTTACATTTGA  147
      |||||||||||||| |||||||||||||||||||||| ||||||| ||||
seq2  TTATAAGGAGTCATAATATCCACTAATATTAGGGTCCCTTTTACA-TTGA  146

seq1  AGCCTAATGTCAGTGATTCTGATTTACTAAATAATATTGTGATCATGAGA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTAATGTCAGTGATTCTGATTTACTAAATAATATTGTGATCATGAGA  196

seq1  TATACTAAATAACATTCATTTTGATGTGATGTTTATTGAAATTTCTGAAA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTAAATAACATTCATTTTGATGTGATGTTTATTGAAATTTCTGAAA  246

seq1  CAGCATTAAATGTTTAAATTTTCAGCTCAGTAACATGTAGGAACAAGTAG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATTAAATGTTTAAATTTTCAGCTCAGTAACATGTAGGAACAAGTAG  296

seq1  CATCCAAATAACAATAATTTTAATCATTTCTACATAAAAAGTATATAGAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCAAATAACAATAATTTTAATCATTTCTACATAAAAAGTATATAGAA  346

seq1  CTAATAGACACTCAAGAAAACTTTCACTTACAATTCAAATAGTGATTCAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATAGACACTCAAGAAAACTTTCACTTACAATTCAAATAGTGATTCAT  396

seq1  TCTCCCTGACATTAGGCCAGGTATGCAAAAGGAATGAGCATATGGAAGAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCTGACATTAGGCCAGGTATGCAAAAGGAATGAGCATATGGAAGAA  446

seq1  GCTTAGCCCTGTGAATTCCTGTCAAGGATCTCTCAGTGCCACCAAGGGAT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAGCCCTGTGAATTCCTGTCAAGGATCTCTCAGTGCCACCAAGGGAT  496

seq1  GCATTTCCATCTATAATATGATAGGAGAAAATTAGCTGGGCTCTATTCTG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTCCATCTATAATATGATAGGAGAAAATTAGCTGGGCTCTATTCTG  546

seq1  TTAAAATGCAAAGGCTAAACTGGAAACTGAAGTGGCACTTTTAAAAGAGG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATGCAAAGGCTAAACTGGAAACTGAAGTGGCACTTTTAAAAGAGG  596

seq1  TGAAGGATGTATATGTTTATTAATATTTTAACTTGAGCCAATAATCTCTC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGATGTATATGTTTATTAATATTTTAACTTGAGCCAATAATCTCTC  646

seq1  ATTTCCCACTTCTGAAGATAATGCTAAGACCGCCATCGATTACTGAGATT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCCACTTCTGAAGATAATGCTAAGACCGCCATCGATTACTGAGATT  696

seq1  TGTCTAATACACAAATTGATTTCTGTGGTCTTCCTTTTGAAATTTGAAGA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTAATACACAAATTGATTTCTGTGGTCTTCCTTTTGAAATTTGAAGA  746

seq1  CTCCTTGGAGCAACATAATTCCGCATCAGGCCTCAGGGGCTTCTAGGTTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTGGAGCAACATAATTCCGCATCAGGCCTCAGGGGCTTCTAGGTTT  796

seq1  TAGCATGCTGCCCCGCAGCTTTAGTGAACGGGCTTTAGACCACTGGGCAG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATGCTGCCCCGCAGCTTTAGTGAACGGGCTTTAGACCACTGGGCAG  846

seq1  GCAATCATCAAAAGGCAACTTCATGGTCCCTGAGTAGCTGGGAGCTTATC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATCATCAAAAGGCAACTTCATGGTCCCTGAGTAGCTGGGAGCTTATC  896

seq1  ATCTCAACTTTCAGGCAACTGTTTCATATTAACTGTTCTATGAAATTTCA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAACTTTCAGGCAACTGTTTCATATTAACTGTTCTATGAAATTTCA  946

seq1  ACCTCTCTTTTACCCTTCTTATTGACACATCTCACACTTGGTAATGAAGG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTCTTTTACCCTTCTTATTGACACATCTCACACTTGGTAATGAAGG  996

seq1  CTGCTTCTTCCTTAAATCCCCTATATTGCTATTTATCCAATTTCCGTCTT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTCTTCCTTAAATCCCCTATATTGCTATTTATCCAATTTCCGTCTT  1046

seq1  TGTCTTAGTGGTTTACCTTGGTATAGATTTTTTTTTTTTTTGCCATTTTG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTAGTGGTTTACCTTGGTATAGATTTTTTTTTTTTTTGCCATTTTG  1096

seq1  TCTTCTATTAAAGAAAAGAATTC  1120
      |||||||||||||||||||||||
seq2  TCTTCTATTAAAGAAAAGAATTC  1119


seq1: chr8_55998580_55999702
seq2: B6Ng01-312I15.g_61_1166

seq1  GAATTCTGGGCAAACATTGCTGTTACCATAAGGAAGGAACGCTATTTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGCAAACATTGCTGTTACCATAAGGAAGGAACGCTATTTTTC  50

seq1  CAAAATAATTCTTAAGTATTTTTTTGTATGCTAAGCCCAAATCTTCAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATAATTCTTAAGTATTTTTTTGTATGCTAAGCCCAAATCTTCAACA  100

seq1  TTTTCCTTTCCAGAACTGAGTATATTTATCTCATATCATAGAATTCCATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTTTCCAGAACTGAGTATATTTATCTCATATCATAGAATTCCATA  150

seq1  GATTTCTTTTAATTTTAAAAAATTATTATAGTGACATTTATATTTATAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCTTTTAATTTTAAAAAATTATTATAGTGACATTTATATTTATAAA  200

seq1  CAATACTCATTAACTAAAATTAATATGATTACCAGATTTTTTAAATGATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATACTCATTAACTAAAATTAATATGATTACCAGATTTTTTAAATGATT  250

seq1  AATTGAGTTATAGTTATAGGAGATATAACGTATTTTTTGCATGAAATGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGAGTTATAGTTATAGGAGATATAACGTATTTTTTGCATGAAATGCT  300

seq1  TTATATTTTATTTTTGCATCTATCAGAACAAGTATAAAACCTGCTTGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTTTATTTTTGCATCTATCAGAACAAGTATAAAACCTGCTTGCAA  350

seq1  TTATTAGCAGAGAGTAGCTTGTCCCCCTTCTGGCTAAAGGGGTACAAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAGCAGAGAGTAGCTTGTCCCCCTTCTGGCTAAAGGGGTACAAACT  400

seq1  GCCTTCATTTGTTCACATGTCATTAGAATTTAGCATGTATATAAAGAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCATTTGTTCACATGTCATTAGAATTTAGCATGTATATAAAGAGTT  450

seq1  ACAGCTTTTCTGAGCTATATTTGAGATGACTGAATGTTTTCACAACACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTTTTCTGAGCTATATTTGAGATGACTGAATGTTTTCACAACACAT  500

seq1  TGCAGAGGTGTACTGACCCTTTAATGCTCTCTTTCTGTTGTCATGGAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAGGTGTACTGACCCTTTAATGCTCTCTTTCTGTTGTCATGGAAAT  550

seq1  AAGATTTTTGAGTAGGTTTATCTGCCGTGCTTTGCTTTTTATAGACTAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTTTTGAGTAGGTTTATCTGCCGTGCTTTGCTTTTTATAGACTAAT  600

seq1  TTCCAGTTGATTTTGGACAAGTGTTCTTAGCCTTCAAATAAAAACACTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGTTGATTTTGGACAAGTGTTCTTAGCCTTCAAATAAAAACACTAA  650

seq1  ACTTTACAATCTTTTAAAATTTTTCTCCCAATAAGGTTTTTAAAATCCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTACAATCTTTTAAAATTTTTCTCCCAATAAGGTTTTTAAAATCCTG  700

seq1  AAGATTGGGCATTTTAAGATATCCATTAGTGTACATTAGATATGTATGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTGGGCATTTTAAGATATCCATTAGTGTACATTAGATATGTATGTT  750

seq1  AATTATTGGCTCAAAAAAAGCAAAGATGCTTCTTAAAATGAGGACAATAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTGGCTCAAAAAAAGCAAAGATGCTTCTTAAAATGAGGACAATAA  800

seq1  AAACAATCTCCAACTCCAATTTTAGTTTTTAAAAATCATATTGCTCTTAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAATCTCCAACTCCAATTTTAGTTTTTAAAAATCATATTGCTCTTAG  850

seq1  TTTAATATTGTTAATATAAATCAACTAACATATGTATTTTGAAACATGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATATTGTTAATATAAATCAACTAACATATGTATTTTGAAACATGAA  900

seq1  TAATGTCTTACAGTTTTGTCAGCCACAGAGTCAAATGGCGCTTATGGTCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTCTTACAGTTTTGTCAGCCACAGAGTCAAATGGCGCTTATGGTCT  950

seq1  GACATCAGACTGTAGCTATGGTAGTTGTCA-CCCCCTCTTTTATTCTGAC  999
      |||||||||||||||||||||||| ||||| |||||||||||||||||| 
seq2  GACATCAGACTGTAGCTATGGTAG-TGTCACCCCCCTCTTTTATTCTGA-  998

seq1  CCAGGTCTCCTCTGAGGAAACACTCT-GTGGTGATACTGCACTTACCTAG  1048
      |||||||| ||||||||||||||||| ||||||||||||||||   ||||
seq2  CCAGGTCT-CTCTGAGGAAACACTCTGGTGGTGATACTGCACT--ACTAG  1045

seq1  ATAAACTGCCCATCCTCAGAACCCTTAACTTAATCCTGTCTCCAAAATCC  1098
      |||||||| |||| ||||| |||||  |||  || |||||||  ||||||
seq2  ATAAACTG-CCAT-CTCAG-ACCCT--ACT--AT-CTGTCTC--AAATCC  1085

seq1  CATTTGCTGTATAAGTAAAATATTC  1123
         ||||||||| ||| ||||||||
seq2  --ATTGCTGTAT-AGT-AAATATTC  1106


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