BAC Information

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BAC

Clone NameB6Ng01-312P05
Chromosome8 (Build37)
Map Location 62,364,322 - 62,365,493
singlet/doubletsinglet
Overlap genenone
Upstream gene4930431L04Rik, BC030500, LOC665116, LOC436042
Downstream geneAadat, Mfap3l, LOC100040679
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-312P05.bB6Ng01-312P05.g
ACCGA104292GA104293
length1,0091,202
definitionB6Ng01-312P05.b B6Ng01-312P05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaactctaacaacaaaagtaacacgaagcaacgattacttttcc
ttaatatctcctaatatcaatggactcaattccccaagaaatagacatag
attaacagactggctgcataaacaggtctcaacattttgctgcatacagg
aaacccaccacagggacaaaacagacactacctcagagtaaaaggttgga
aaacaattttcctagcaaacggtccaaagaaacaagctgcaatagccaat
ctaataaaaatgacttccagcctaaagttaacacaaaagacaaggagggg
cacttcatactcatcttccaagatgaattctcaattctgaatatctatgc
tccaaaatgcaagggcatccatattcattaaggaaaatatagtaaaactc
aaagcacacattgcaactcatgaaataatagtgggagacttcaatacccc
actcttatcaatggacaaatcctggaaacagaaactaaacagggacacag
tgaaactaacagaagttatgaaaccaatggatttaacatatatctacaga
acattttatcctaaaacaaaaggatataccttcttctcagcaactcatgg
taccttctccaaattgaccatataatctgtcataacacaggccttaacag
atataaaaatattgaaataatcccatacatcctatcagatcaccatggac
taaggttgattttcaataacaacataaataatagaaagcccacatgcagg
tggaagctgaacaacactctactcaatgataacttggtcaaggaagaatt
aatgaaagaaattaaagactctttagagtttaatgaaaatgaagctgcaa
catacctaaacttatgggacataatgaaagcagtcctaagaggaaaactc
atagctccaagtgccactgtcatggtttgtatattcttggaccaggagtg
gcactatttggaggtgtagccttgttggaatagtgtggcctggttggaat
aagtgtgtt

gaattcccttgatcaaaacttcattattttttgctaattcctctttattc
ttttttttagatattttctttatttacatttcaaatgttatcccttttcc
tagtttccaaaaaaaccctaatccctccaccctccccctgctccccaacc
cacccactcccattcctactcctggcatttccctattttggggcatagag
ccttcacaagactaagggcctctcctcccattgatgactgacaaggccat
cctctgctacaaatatagctagagccgcaagtttcaccatgtgttttctt
tagctggtggtatagttccaaggagctctgagggtattggttagttcata
ttgctgttccttctatggggcttcagtccccttctgctcactgggtattt
ctctggctccttcattggggaccttgtgctctgtccaatggatgactgtg
agcattcacttctgtatttgccaggcactggcagagcctcgcaggagaca
gctatattaagctcctgtcagcaggctcttgttgggatctgcctagtgtc
tgggtttggtggttgcttatggggtgaaaaatagtaagcattccattgat
caaaacttcatttttaattgattaaatgtattctttcacaattctatata
tgtacagtacattctctctattctcatcacacatttgttccacatctcta
atatctctgcatcctttctgatagttcctttcttgtactagtagctttgt
ttcctgtagttattgtttttttgttgttgttgatgttttttttttttaat
ttcctggtttgggatttccttcccatctatgatcattttatgttccagga
tgaaaacacacacacacacacacacacacacacacacacgcacacacaca
cgcacacacatgcacacacagagcctttataatttttaaatatgccttat
gcatcaataataagttgggcaactgcctaacctacatgttgttaagaacc
ctacctttccctactgaataattttgaagtggacttacttactagtttct
aatccatcctgacctgccctgaactccaactgaaacaagccttctgaacc
catagtctctctggagccacttttcacacatgggtgaactcttattgatt
ccctaggccaaggtcattcgtatcccttggtgaccttctggtctttttcc
cc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_62364322_62365493
seq2: B6Ng01-312P05.g_65_1266

seq1  GAATTCCCTTGATCAAAACTTCATTATTTTTTGCTAATTCCTCTTTATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTTGATCAAAACTTCATTATTTTTTGCTAATTCCTCTTTATTC  50

seq1  TTTTTTTTAGATATTTTCTTTATTTACATTTCAAATGTTATCCCTTTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTAGATATTTTCTTTATTTACATTTCAAATGTTATCCCTTTTCC  100

seq1  TAGTTTCCAAAAAAACCCTAATCCCTCCACCCTCCCCCTGCTCCCCAACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTCCAAAAAAACCCTAATCCCTCCACCCTCCCCCTGCTCCCCAACC  150

seq1  CACCCACTCCCATTCCTACTCCTGGCATTTCCCTATTTTGGGGCATAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCACTCCCATTCCTACTCCTGGCATTTCCCTATTTTGGGGCATAGAG  200

seq1  CCTTCACAAGACTAAGGGCCTCTCCTCCCATTGATGACTGACAAGGCCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCACAAGACTAAGGGCCTCTCCTCCCATTGATGACTGACAAGGCCAT  250

seq1  CCTCTGCTACAAATATAGCTAGAGCCGCAAGTTTCACCATGTGTTTTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGCTACAAATATAGCTAGAGCCGCAAGTTTCACCATGTGTTTTCTT  300

seq1  TAGCTGGTGGTATAGTTCCAAGGAGCTCTGAGGGTATTGGTTAGTTCATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGGTGGTATAGTTCCAAGGAGCTCTGAGGGTATTGGTTAGTTCATA  350

seq1  TTGCTGTTCCTTCTATGGGGCTTCAGTCCCCTTCTGCTCACTGGGTATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGTTCCTTCTATGGGGCTTCAGTCCCCTTCTGCTCACTGGGTATTT  400

seq1  CTCTGGCTCCTTCATTGGGGACCTTGTGCTCTGTCCAATGGATGACTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGCTCCTTCATTGGGGACCTTGTGCTCTGTCCAATGGATGACTGTG  450

seq1  AGCATTCACTTCTGTATTTGCCAGGCACTGGCAGAGCCTCGCAGGAGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTCACTTCTGTATTTGCCAGGCACTGGCAGAGCCTCGCAGGAGACA  500

seq1  GCTATATTAAGCTCCTGTCAGCAGGCTCTTGTTGGGATCTGCCTAGTGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATATTAAGCTCCTGTCAGCAGGCTCTTGTTGGGATCTGCCTAGTGTC  550

seq1  TGGGTTTGGTGGTTGCTTATGGGGTGAAAAATAGTAAGCATTCCATTGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTTGGTGGTTGCTTATGGGGTGAAAAATAGTAAGCATTCCATTGAT  600

seq1  CAAAACTTCATTTTTAATTGATTAAATGTATTCTTTCACAATTCTATATA  650
      |                  |||||||||||||||||||||||||||||||
seq2  CNNNNNNNNNNNNNNNNNNGATTAAATGTATTCTTTCACAATTCTATATA  650

seq1  TGTACAGTACATTCTCTCTATTCTCATCACACATTTGTTCCACATCTCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACAGTACATTCTCTCTATTCTCATCACACATTTGTTCCACATCTCTA  700

seq1  ATATCTCTGCATCCTTTCTGATAGTTCCTTTCTTGTACTAGTAGCTTTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTCTGCATCCTTTCTGATAGTTCCTTTCTTGTACTAGTAGCTTTGT  750

seq1  TTCCTGTAGTTATTG-TTTTTTGTTGTTGTTGATGTTTTTTTTTTTTAA-  798
      ||||||||||||||| ||||||||||||||||||||||||||||||||| 
seq2  TTCCTGTAGTTATTGTTTTTTTGTTGTTGTTGATGTTTTTTTTTTTTAAT  800

seq1  TTCCTGGTTTGGGA-TTCCTTCCCATCTATGATCA-TTTATGTTCCAGGA  846
      |||||||||||||| |||||||||||||||||||| ||||||||||||||
seq2  TTCCTGGTTTGGGATTTCCTTCCCATCTATGATCATTTTATGTTCCAGGA  850

seq1  TGAAAACACACACACACACACACACACACACACACACACGCACACACACA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAACACACACACACACACACACACACACACACACACGCACACACACA  900

seq1  CGCACACACATGCACACACAGAGCCTTTAT-ATTTTTAAATATGCCTTAT  945
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CGCACACACATGCACACACAGAGCCTTTATAATTTTTAAATATGCCTTAT  950

seq1  GCATC-ATAAT-AGTTGGGCAACTGCCTAACCTACATGTTGTT-AGAA-C  991
      ||||| ||||| ||||||||||||||||||||||||||||||| |||| |
seq2  GCATCAATAATAAGTTGGGCAACTGCCTAACCTACATGTTGTTAAGAACC  1000

seq1  CTAC--TTTCCTACTG-ATAATTTTG-AGT-GAC-TACTTACTAGTTTCT  1035
      ||||  || ||||||| ||||||||| ||| ||| |||||||||||||||
seq2  CTACCTTTCCCTACTGAATAATTTTGAAGTGGACTTACTTACTAGTTTCT  1050

seq1  AAATTCCATCTTGA-CTGCCCTTGACT-CAACTGAA--CAGCCTTCTG-A  1080
      ||  |||||| ||| |||||||  ||| ||||||||   ||||||||| |
seq2  AA--TCCATCCTGACCTGCCCTGAACTCCAACTGAAACAAGCCTTCTGAA  1098

seq1  GCCAT-GTCTCT---GAG-CACTTTTCACA---TGGTG-ACTCTTTTTGT  1121
       |||| ||||||   ||| |||||||||||    |||| |||||| ||| 
seq2  CCCATAGTCTCTCTGGAGCCACTTTTCACACATGGGTGAACTCTTATTGA  1148

seq1  TTCTCTAGTGCATGTTCTTCTCTATCCCTTGGTGA-CTTCT-GTCTTTTC  1169
      ||| ||||  || | || |   ||||||||||||| ||||| ||||||| 
seq2  TTCCCTAGGCCAAGGTCATTCGTATCCCTTGGTGACCTTCTGGTCTTTTT  1198

seq1  CCC-  1172
      ||| 
seq2  CCCC  1202


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