BAC Information

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BAC

Clone NameB6Ng01-313F05
Chromosome8 (Build37)
Map Location 49,281,178 - 49,442,308
singlet/doubletdoublet
Overlap geneOdz3
Upstream geneStox2, 4930448N21Rik, D030016E14Rik, Rwdd4a, LOC384819, LOC667422, Ing2, LOC546058, Cdkn2aip, LOC100039801, Cldn22, Wwc2, LOC100040113, Dctd
Downstream gene2900073C17Rik, LOC100039866
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-313F05.bB6Ng01-313F05.g
ACCGA104572GA104573
length1,0111,101
definitionB6Ng01-313F05.b B6Ng01-313F05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(49,441,296 - 49,442,308)(49,281,178 - 49,282,285)
sequence
gaattcaggatgagatagaagagctctgtgtcccagcttttctctgagaa
acccacgagcttcagaggaggactctatgcaagtatttacaagtttatca
aacagtgcccatcatttgctgacttaccagcatgtttacaattttaaaaa
gaacatttgaaaaacactaccagaagtagtaacatttttgacttggacaa
attaaagaggtaccatttgaaaagcatcaggatgggtttacaaaggccct
ttatgaacctgaagctcaccctgatattcaaaggggcagcttaggcaaaa
acagcgatctaagtggccactcttatgcaaggatatcagtaatgttcttc
tagctccacactactgatttttaccaaaaggattggcctgcctttttttg
ttagaaaagccaaatcttaaggttttaataataaaaaaaatacatagcaa
aataacctgatgccaatagaagggaacaggtacttagatacaagactcct
gtttcacggaagaatccagaaagataaaagatcttccaattgcattgtac
ttataacccctttaaaaaaaaaaaaactatacacatttcacttacattta
atttccaaagatcatgtgatgagttctgttttaaatctgtttctcaatat
gagtttgtagttaaagttattacttgaacacattcagctacatatgacct
agctattttataaatatgctaactgtttgggtgattaacataaaagggaa
ttgtttttggaagtaacagagttaaatgacaggactatttgagtagcttc
catattcatatgcaaacagtgaagaataaagcaaaattctgaattgattc
tattactcaatttctttcttatagaaatacaaacacccgatcttgctcca
aaatcaaggaatgagaatgggctgtaaaggagacttaagcgcgaagctgt
ttgattcttttggaattgtttgttgtgctgctgctgctgctgttgctggt
ggtggtgctgg

gaattctccttcgcctaggacgtgtcactccctgattggctgcagcccat
cggccgagttgacgtcacggggaaggcagagcacatggagtgaagaacca
ccctcggcacatgcgcagattatttgtttaccacttagaacacagctgtc
agcgccatcttgtaacggcgaatgtgggcgcggctcccaacagtcaatct
catctgagacatcgatggagtcttcccttttggctcgggggtgtcagagc
atgctgagtccttggctctgggcacacaatgcctctggggtgtggctggg
agtaaggatggaacggaactgtcacacccagctcctggatctccaaggcc
cctgatagcactgcaggggaccagctctgagttaaggcagagtgctgaat
agaatgcagttcttgccttggccaacctttagaccagccaggagagtcca
agcaaaagcttagagctttggcaaaaacaagagttcatttgaatgactgt
ctccagttcttcggagacaggaaggtgtgagccctgagtgttttcctctt
gcttgcctatccacttcacgctgttaagaacagaccagagctgattgtcc
actctctttgggaaacacctccagcctttgacagtttagagggagaattc
tttcctcttcttccaactccccttccagatggtgtgttgagctgaaagca
agtctctaaactgattgctgacaagccaacagtagctagcaggtcaaata
caaatgcactgtttgtgcctaagggcttgactacgttctggcttgctgac
cttccagaaagatccacagagatatatatcctgaggtattctgcctgcag
gatccagaactgttcagaaagaatcaagcaactgactctgttttatatct
tggaagaaacatctggggagacatattcccagtactatgtagacgtccaa
tctctcccaaggtaggaactcccatccttataacctattcaagaaagtaa
aatgactaggtttaggcaactccaattttttctcacacattctgttcaac
atggagatgattccacacccattaccttggatgagctatgtcagcttagc
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_49441296_49442308
seq2: B6Ng01-313F05.b_45_1055 (reverse)

seq1  CCAGCACCACCACCAGCAACAGCAGCAGCAGCAGCAACAACAAAACAATT  50
      ||||||||||||||||||||||||||||||||||| ||||| ||||||||
seq2  CCAGCACCACCACCAGCAACAGCAGCAGCAGCAGC-ACAAC-AAACAATT  48

seq1  CCAAAAGAATCAAACAGCTTCGCGCTTTAAGTCTCC-TTACAGCCCATTC  99
      ||||||||||||||||||||||||| |||||||||| |||||||||||||
seq2  CCAAAAGAATCAAACAGCTTCGCGC-TTAAGTCTCCTTTACAGCCCATTC  97

seq1  TCATTCCTTGATTTTGGAGCAAGATCGGGTGTTTGTATTTCTATAAGAAA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCCTTGATTTTGGAGCAAGATCGGGTGTTTGTATTTCTATAAGAAA  147

seq1  GAAATTGAGTAATAGAATCAATTCAGAATTTTGCTTTATTCTTCACTGTT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTGAGTAATAGAATCAATTCAGAATTTTGCTTTATTCTTCACTGTT  197

seq1  TGCATATGAATATGGAAGCTACTCAAATAGTCCTGTCATTTAACTCTGTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATATGAATATGGAAGCTACTCAAATAGTCCTGTCATTTAACTCTGTT  247

seq1  ACTTCCAAAAACAATTCCCTTTTATGTTAATCACCCAAACAGTTAGCATA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCAAAAACAATTCCCTTTTATGTTAATCACCCAAACAGTTAGCATA  297

seq1  TTTATAAAATAGCTAGGTCATATGTAGCTGAATGTGTTCAAGTAATAACT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAAAATAGCTAGGTCATATGTAGCTGAATGTGTTCAAGTAATAACT  347

seq1  TTAACTACAAACTCATATTGAGAAACAGATTTAAAACAGAACTCATCACA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTACAAACTCATATTGAGAAACAGATTTAAAACAGAACTCATCACA  397

seq1  TGATCTTTGGAAATTAAATGTAAGTGAAATGTGTATAGTTTTTTTTTTTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTTTGGAAATTAAATGTAAGTGAAATGTGTATAGTTTTTTTTTTTT  447

seq1  TAAAGGGGTTATAAGTACAATGCAATTGGAAGATCTTTTATCTTTCTGGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGGGTTATAAGTACAATGCAATTGGAAGATCTTTTATCTTTCTGGA  497

seq1  TTCTTCCGTGAAACAGGAGTCTTGTATCTAAGTACCTGTTCCCTTCTATT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCGTGAAACAGGAGTCTTGTATCTAAGTACCTGTTCCCTTCTATT  547

seq1  GGCATCAGGTTATTTTGCTATGTATTTTTTTTATTATTAAAACCTTAAGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCAGGTTATTTTGCTATGTATTTTTTTTATTATTAAAACCTTAAGA  597

seq1  TTTGGCTTTTCTAACAAAAAAAGGCAGGCCAATCCTTTTGGTAAAAATCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCTTTTCTAACAAAAAAAGGCAGGCCAATCCTTTTGGTAAAAATCA  647

seq1  GTAGTGTGGAGCTAGAAGAACATTACTGATATCCTTGCATAAGAGTGGCC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTGTGGAGCTAGAAGAACATTACTGATATCCTTGCATAAGAGTGGCC  697

seq1  ACTTAGATCGCTGTTTTTGCCTAAGCTGCCCCTTTGAATATCAGGGTGAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGATCGCTGTTTTTGCCTAAGCTGCCCCTTTGAATATCAGGGTGAG  747

seq1  CTTCAGGTTCATAAAGGGCCTTTGTAAACCCATCCTGATGCTTTTCAAAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGGTTCATAAAGGGCCTTTGTAAACCCATCCTGATGCTTTTCAAAT  797

seq1  GGTACCTCTTTAATTTGTCCAAGTCAAAAATGTTACTACTTCTGGTAGTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACCTCTTTAATTTGTCCAAGTCAAAAATGTTACTACTTCTGGTAGTG  847

seq1  TTTTTCAAATGTTCTTTTTAAAATTGTAAACATGCTGGTAAGTCAGCAAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCAAATGTTCTTTTTAAAATTGTAAACATGCTGGTAAGTCAGCAAA  897

seq1  TGATGGGCACTGTTTGATAAACTTGTAAATACTTGCATAGAGTCCTCCTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGGCACTGTTTGATAAACTTGTAAATACTTGCATAGAGTCCTCCTC  947

seq1  TGAAGCTCGTGGGTTTCTCAGAGAAAAGCTGGGACACAGAGCTCTTCTAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCTCGTGGGTTTCTCAGAGAAAAGCTGGGACACAGAGCTCTTCTAT  997

seq1  CTCATCCTGAATTC  1013
      ||||||||||||||
seq2  CTCATCCTGAATTC  1011


seq1: chr8_49281178_49282285
seq2: B6Ng01-313F05.g_65_1165

seq1  GAATTCTCCTTCGCCTAGGACGTGTCACTCCCTGATTGGCTGCAGCCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTTCGCCTAGGACGTGTCACTCCCTGATTGGCTGCAGCCCAT  50

seq1  CGGCCGAGTTGACGTCACGGGGAAGGCAGAGCACATGGAGTGAAGAACCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCCGAGTTGACGTCACGGGGAAGGCAGAGCACATGGAGTGAAGAACCA  100

seq1  CCCTCGGCACATGCGCAGATTATTTGTTTACCACTTAGAACACAGCTGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCGGCACATGCGCAGATTATTTGTTTACCACTTAGAACACAGCTGTC  150

seq1  AGCGCCATCTTGTAACGGCGAATGTGGGCGCGGCTCCCAACAGTCAATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGCCATCTTGTAACGGCGAATGTGGGCGCGGCTCCCAACAGTCAATCT  200

seq1  CATCTGAGACATCGATGGAGTCTTCCCTTTTGGCTCGGGGGTGTCAGAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGAGACATCGATGGAGTCTTCCCTTTTGGCTCGGGGGTGTCAGAGC  250

seq1  ATGCTGAGTCCTTGGCTCTGGGCACACAATGCCTCTGGGGTGTGGCTGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGAGTCCTTGGCTCTGGGCACACAATGCCTCTGGGGTGTGGCTGGG  300

seq1  AGTAAGGATGGAACGGAACTGTCACACCCAGCTCCTGGATCTCCAAGGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGGATGGAACGGAACTGTCACACCCAGCTCCTGGATCTCCAAGGCC  350

seq1  CCTGATAGCACTGCAGGGGACCAGCTCTGAGTTAAGGCAGAGTGCTGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATAGCACTGCAGGGGACCAGCTCTGAGTTAAGGCAGAGTGCTGAAT  400

seq1  AGAATGCAGTTCTTGCCTTGGCCAACCTTTAGACCAGCCAGGAGAGTCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGCAGTTCTTGCCTTGGCCAACCTTTAGACCAGCCAGGAGAGTCCA  450

seq1  AGCAAAAGCTTAGAGCTTTGGCAAAAACAAGAGTTCATTTGAATGACTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAAGCTTAGAGCTTTGGCAAAAACAAGAGTTCATTTGAATGACTGT  500

seq1  CTCCAGTTCTTCGGAGACAGGAAGGTGTGAGCCCTGAGTGTTTTCCTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGTTCTTCGGAGACAGGAAGGTGTGAGCCCTGAGTGTTTTCCTCTT  550

seq1  GCTTGCCTATCCACTTCACGCTGTTAAGAACAGACCAGAGCTGATTGTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCCTATCCACTTCACGCTGTTAAGAACAGACCAGAGCTGATTGTCC  600

seq1  ACTCTCTTTGGGAAACACCTCCAGCCTTTGACAGTTTAGAGGGAGAATTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCTTTGGGAAACACCTCCAGCCTTTGACAGTTTAGAGGGAGAATTC  650

seq1  TTTCCTCTTCTTCCAACTCCCCTTCCAGATGGTGTGTTGAGCTGAAAGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCTTCTTCCAACTCCCCTTCCAGATGGTGTGTTGAGCTGAAAGCA  700

seq1  AGTCTCTAAACTGATTGCTGACAAGCCAACAGTAGCTAGCAGGTCAAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCTAAACTGATTGCTGACAAGCCAACAGTAGCTAGCAGGTCAAATA  750

seq1  CAAATGCACTGTTTGTGCCTAAGGGCTTGACTACGTTCTGGCTTGCTGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGCACTGTTTGTGCCTAAGGGCTTGACTACGTTCTGGCTTGCTGAC  800

seq1  CTTCCAGAAAGATCCACAGAGATATATATCCTGAGGTATTCTGCCTGCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAGAAAGATCCACAGAGATATATATCCTGAGGTATTCTGCCTGCAG  850

seq1  GATCCAGAACTGTTCAGAAAGAATCAAGCAACTGACTCTGTTTTATATCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCAGAACTGTTCAGAAAGAATCAAGCAACTGACTCTGTTTTATATCT  900

seq1  TGGAAGAAACATCTGGGGAGACATATTCCCAGTACTATGTAGACGTCCAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGAAACATCTGGGGAGACATATTCCCAGTACTATGTAGACGTCCAA  950

seq1  TCTCTCCCAAGGTAGGAACTCCCATCCTTATAACCTATTCAAGAAAGTAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCCAAGGTAGGAACTCCCATCCTTATAACCTATTCAAGAAAGTAA  1000

seq1  AATGACTAGGTTTTAGGCAACTCCA--TTTTTCTCACACCATTCTGTTC-  1047
      |||||||||| ||||||||||||||  ||||||||||| |||||||||| 
seq2  AATGACTAGG-TTTAGGCAACTCCAATTTTTTCTCACA-CATTCTGTTCA  1048

seq1  ACATGGGAAGATGAATTCCCACACCCAATACCTTTGAATGAAGCTATGGT  1097
      ||||||  ||||||  | ||||||||| |||| ||| ||| |||||||  
seq2  ACATGG--AGATGA--TTCCACACCCATTACC-TTGGATG-AGCTATG--  1090

seq1  CCAGCTTAGCT  1108
       ||||||||||
seq2  TCAGCTTAGCT  1101


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