BAC Information

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BAC

Clone NameB6Ng01-314C16
Chromosome8 (Build37)13 (Build37)
Map Location 61,258,304 - 61,258,66287,612,030 - 87,612,494
singlet/doubletsingletsinglet
Overlap gene4930431L04Rik
Upstream geneLOC100040711
Downstream geneBC030500, LOC665116, LOC436042
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-314C16.bB6Ng01-314C16.g
ACCGA105183GA105184
length860460
definitionB6Ng01-314C16.b B6Ng01-314C16.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(61,258,304 - 61,258,662)(87,612,030 - 87,612,494)
sequence
gaattcacaatagaggaatcaggaatggccgagaagcacctaaataaatg
tttaaagtccttagtgatcagagaaatgcaaatcaaaatgaccctgagat
tccacattacatcaatcaaaatggctaagattaaaaccttaggtaagaac
atatgttggagaggatgtggagaaagaggaacactcctccattgctgttg
ggattgcaaactggtccaaccactctggaaatttatctggaggttcttca
caaaattgaaaatagatctacctgaagactcagctataccactcttggaa
atatacccaaaagatgtcccaccatgtcacaggagcacacgtttcaattt
ttcatagcagccttatttgtgataccaagaagccataaacaacctagata
ttccaatacagaggaattaatacagaaaatgtgattcatttacacaatgg
aatagtactcagctattaagaaggaggacatcccttgttttgcaggcaaa
tgaagagaactagaaaatatcctgagtgagtaactcaaactaaaaagagc
atgcatggtatatactcactaataaatggatattagcaaaaaacaaaaca
aaacaaaacaaaaaaccaaccaaacaaacaaaaactaacaaaaaaaaccc
acaaacaacaaaaaacaaaaccaaaaatccaaaaccatgtgcagaatacc
taagatacagttcaaagaactcaaatagttcaataagctgaagtccccaa
gtgaggacatctcagtcccactgggcagagaagatagcaatctcaagttg
ggacttgggagggaaagtagacagggtggaggggtgcattggtggggggg
aggggaacct
cagggcccaggagtgggagtgggtgggttggggagcaaggggaaagagga
aggaataggggatagtaggaggggaaactaggaaaggggataacatttga
aatgtaaataaagaaaatatctaataaaaaatacaaaataatctcagcac
tctacaaaatcagaaaatataaaggaagtaggtagacaaatttctcaatt
aataccacttttgtaagttaaatcaggatcagataatctatgttaatgca
accataacccctaaggaaatagaagatgtcattaaaagattcctaaccca
aaaaaaaaaaaaaaagtggggggggcaggggagagctgggccagatagtt
ttaggaaggaattatgcaacacttttttggatattgttgttttgttttgt
tttgttttggtttctgtttgtttgattgttttttgtttttttttgttttc
tttgggggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_61258304_61258662
seq2: B6Ng01-314C16.b_345_679

seq1  ATATACCCAAAAGATGTCCCGCTATACCTCAGGGACACTTG-ATCAACTA  49
      |||||||||||||||||||| | ||  | ||||  |||  |  |||| | 
seq2  ATATACCCAAAAGATGTCCCACCATGTCACAGGAGCACACGTTTCAATTT  50

seq1  TGCCCATAGCAGCTTTATTCATAATAATCAGAAACTGGAAACAACATAGA  99
      |   ||||||||| |||||  | |||   |||| |   ||||||| ||||
seq2  T--TCATAGCAGCCTTATTTGTGATACCAAGAAGCCATAAACAACCTAGA  98

seq1  CATTCCTCAGCTTAAGGACGGATATAGAATATGTGCTCTGTCTGCGCAAT  149
       |||||    |  | | |   ||| |||| ||||| |   | | | ||||
seq2  TATTCCAATACAGAGGAATTAATACAGAAAATGTGATTCATTTACACAAT  148

seq1  GGGATACTATTTAGCTGTTAAAACAGACAACATTGAAACCTGTGTGGTGG  199
      || ||| || | |||| |||| |  ||                      |
seq2  GGAATAGTACTCAGCTATTAAGAAGGA----------------------G  176

seq1  GACATGCCTT-TAATCCCAGCAGTTGGGAGGCAGAGGCAGGTGGATTTCT  248
      ||||| |||| |  | |  |||  |  || | |||   ||      | ||
seq2  GACATCCCTTGTTTTGCAGGCAAAT--GAAG-AGAACTAGAAAATATCCT  223

seq1  GAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTCCAGGACAGCCAAGGCC  298
      ||||  |||   | |     ||| | || |  | || |  |   |    |
seq2  GAGT--GAG--TAACTCAAACTAAAAAGAGCATGCATGGTATATA----C  265

seq1  ACACAGAGAAA-CCCTGTCACAAAAAAACAAAAC---------CAAAAAA  338
       |||  | |||    | | |  ||||||||||||         |||||||
seq2  TCACTAATAAATGGATATTAGCAAAAAACAAAACAAAACAAAACAAAAAA  315

seq1  CTAAACCAAACAAACAAAAAC  359
      |  ||||||||||||||||||
seq2  C-CAACCAAACAAACAAAAAC  335

seq1: chr13_87612030_87612494
seq2: B6Ng01-314C16.g_62_527

seq1  GAATTCCAGGGCCCAGGAGTGGGAGTGGGTGGGTTGGGGAGCAAGGGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGGCCCAGGAGTGGGAGTGGGTGGGTTGGGGAGCAAGGGGAA  50

seq1  AGAGGAAGGAATAGGGGATAGTAGGAGGGGAAACTAGGAAAGGGGATAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAAGGAATAGGGGATAGTAGGAGGGGAAACTAGGAAAGGGGATAAC  100

seq1  ATTTGAAATGTAAATAAAGAAAATATCTAATAAAAAATACAAAATAATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAAATGTAAATAAAGAAAATATCTAATAAAAAATACAAAATAATCT  150

seq1  CAGCACTCTACAAAATCAGAAAATATAAAGGAAGTAGGTAGACAAATTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACTCTACAAAATCAGAAAATATAAAGGAAGTAGGTAGACAAATTTC  200

seq1  TCAATTAATACCACTTTTGTAAGTTAAATCAGGATCAGATAATCTATGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTAATACCACTTTTGTAAGTTAAATCAGGATCAGATAATCTATGTT  250

seq1  AATGCAACCATAACCCCTAAGGAAATAGAAGATGTCATTAAAAGATTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAACCATAACCCCTAAGGAAATAGAAGATGTCATTAAAAGATTCCT  300

seq1  AACCCAAAAAAAAAAAAAAAAGTGGGGGGGGCAGGGGAGAGCTGGGCCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAAAAAAAAAAAAAAAAGTGGGGGGGGCAGGGGAGAGCTGGGCCAG  350

seq1  ATAGTTTTAGGAAGGAATTATGCAACACTTTTTTGGATATTGTTGTTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTTTAGGAAGGAATTATGCAACACTTTTTTGGATATTGTTGTTTTG  400

seq1  TTTTGTTTTGTTTTGGTTTTTGTTTGTTTGTTTGTTTTTTGTTTTTTTTT  450
      ||||||||||||||||||| |||||||||| |||||||||||||||||||
seq2  TTTTGTTTTGTTTTGGTTTCTGTTTGTTTGATTGTTTTTTGTTTTTTTTT  450

seq1  GTTTT-TTTGGGGGTT  465
      ||||| ||||||||||
seq2  GTTTTCTTTGGGGGTT  466