BAC Information

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BAC

Clone NameB6Ng01-314I03
Chromosome8 (Build37)
Map Location 53,447,983 - 53,448,855
singlet/doubletsinglet
Overlap gene1190028D05Rik
Upstream geneLOC623872, LOC100040220, LOC623935
Downstream geneLOC676688
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-314I03.bB6Ng01-314I03.g
ACCGA105418GA105419
length1,161940
definitionB6Ng01-314I03.b B6Ng01-314I03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcctacactggggtattcagacttcataagacaaaaggttttcc
tcccattgtgtttgactaggccaacctctgctgcatacgcatctggagtc
atgagtcccaccatgtgagttctttggatggtcctttagtctctgggagc
tctggtggtactgactacgtcctatggttgttcctcctatggggctgcaa
acactttcagcttcttgggtcctttctctagctccttcattggggctcct
atgctcagcccaatgtttggctgtgagaatccacctctctattcatgagg
caatggcagagcctctcaggagagagctatatccggctcctgtcagcaag
cacttgttggcatccacaagtatctgggtttggtgattgtaaatagggtg
gatcccaaggtggggcagtctatagatggtatttcatcagtctctactcg
agaatcaacaaatgggacctcataatatttcaaagcttctgtaaggcaaa
agaaacagtcaataagacaaaaaggccaccaacagattgggaaaggatct
ttacctaccctaaatcagataggggactaatatccaacatatataaagaa
ctcaagaaggtggactccagaaaatccaataacccccattaaaaatgggg
ctcagagctaaacaaagaattctcacctgaggaatactgaatggctgaga
agcacttgaaaaaatgttcagcatccttaatcatcagggaaatgcaaatc
aaaacaaccctgagattcaatctcacacgaatcagaatggctaagatcaa
aaattcaggtgatagcatatgctgtcgaggatgtggagaaagaaggaaca
ctcctccattgttggtgggattgcaagcttgtacaaatactctggaaatc
agtctggtgggttcctcagaaaattggaaatagtatttccggaggatccc
ccaataccactcctgggcatatatcagaacatgtttccaactggtaacag
gacacatgatccactatgttcatagcagccttatttaataatatcagaag
ctgcaaagaactcagattgtttctcaacagaagcaccagaatacgaaaat
gttgtacaatttatctatggatacaatcctggcattaaaacagcaaaatt
tatgtagaacg

gaattcaagaggaataccatattatgatttacatttcataactggacatt
ggttatttttgaagaatattatttaaatgatgcaaatgaagttgaacaaa
ctaataatgatgttttccaaaatagaaacaagagggaaaatttttgaata
aatcccagatcaattttctttgtttgtttccgtgtttgttttccttttgt
tttcttttttgttttgtttggaggcaaaaatactgatttattgaatggtg
catgctaatttatgacaatgatcccattcttgttccatagtcctccatga
aaagatgtaagactcatgaaaaatttaaaagtggttgaatactggatttt
ttttaattggatacattttttaaatttattttttattagatattttcttt
atatacatttcaaatgttaggccgaaagttcgctataccctccccgcatc
ctgctcccctacccacccactcccgcttcttggccctggcattcccctct
agtgggacatgtaaagtttgcaataccaaggggcctctcttcccagtgat
ggccgactaggccatcttctgttacatatgtagctagaactatgagctct
gggggtactggttagttcatattattgttccacatagagggttgtagacc
ccttcagcttcttgggtgctttctctagtttctccattgggggccctgtg
ttccatcttatagatgactgtgagcatccacttctgtatttgccaagcac
tggcatagcctcatatgagacaactagaacagggtcccttcagcaaaatc
ttgctggcatatgcaatagtgtctgggtttggtggctgattatgggatgg
atccccagatgggggtagtctctgtatagtccattctttagttttagctc
caaactttgtctatgtaactcctttcatgggtattttgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_53447983_53448855
seq2: B6Ng01-314I03.g_67_940

seq1  GAATTCAAGAGGAATACCATATTATGATTTACATTTCATAACTGGACATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGAGGAATACCATATTATGATTTACATTTCATAACTGGACATT  50

seq1  GGTTATTTTTGAAGAATATTATTTAAATGATGCAAATGAAGTTGAACAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATTTTTGAAGAATATTATTTAAATGATGCAAATGAAGTTGAACAAA  100

seq1  CTAATAATGATGTTTTCCAAAATAGAAACAAGAGGGAAAATTTTTGAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATAATGATGTTTTCCAAAATAGAAACAAGAGGGAAAATTTTTGAATA  150

seq1  AATCCCAGATCAATTTTCTTTGTTTGTTTCCGTGTTTGTTTTCCTTTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCAGATCAATTTTCTTTGTTTGTTTCCGTGTTTGTTTTCCTTTTGT  200

seq1  TTTCTTTTTTGTTTTGTTTGGAGGCAAAAATACTGATTTATTGAATGGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTTTGTTTTGTTTGGAGGCAAAAATACTGATTTATTGAATGGTG  250

seq1  CATGCTAATTTATGACAATGATCCCATTCTTGTTCCATAGTCCTCCATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTAATTTATGACAATGATCCCATTCTTGTTCCATAGTCCTCCATGA  300

seq1  AAAGATGTAAGACTCATGAAAAATTTAAAAGTGGTTGAATACTGGATTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATGTAAGACTCATGAAAAATTTAAAAGTGGTTGAATACTGGATTTT  350

seq1  TTTTAATTGGATACATTTTTTAAATTTATTTTTTATTAGATATTTTCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATTGGATACATTTTTTAAATTTATTTTTTATTAGATATTTTCTTT  400

seq1  ATATACATTTCAAATGTTAGGCCGAAAGTTCGCTATACCCTCCCCGCATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACATTTCAAATGTTAGGCCGAAAGTTCGCTATACCCTCCCCGCATC  450

seq1  CTGCTCCCCTACCCACCCACTCCCGCTTCTTGGCCCTGGCATTCCCCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCCCCTACCCACCCACTCCCGCTTCTTGGCCCTGGCATTCCCCTCT  500

seq1  AGTGGGACATGTAAAGTTTGCAATACCAAGGGGCCTCTCTTCCCAGTGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGACATGTAAAGTTTGCAATACCAAGGGGCCTCTCTTCCCAGTGAT  550

seq1  GGCCGACTAGGCCATCTTCTGTTACATATGTAGCTAGAACTATGAGCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCGACTAGGCCATCTTCTGTTACATATGTAGCTAGAACTATGAGCTCT  600

seq1  GGGGGTACTGGTTAGTTCATATTATTGTTCCACATAGAGGGTTGTAGACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGTACTGGTTAGTTCATATTATTGTTCCACATAGAGGGTTGTAGACC  650

seq1  CCTTCAGCTTCTTGGGTGCTTTCTCTAGTTTCTCCATTGGGGGCCCTGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAGCTTCTTGGGTGCTTTCTCTAGTTTCTCCATTGGGGGCCCTGTG  700

seq1  TTCCATCTTATAGATGACTGTGAGCATCCACTTCTGTATTTGCCAAGCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATCTTATAGATGACTGTGAGCATCCACTTCTGTATTTGCCAAGCAC  750

seq1  TGGCATAGCCTCATATGAGACAACTAGAACAGGGTCCCTTCAGCAAAATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATAGCCTCATATGAGACAACTAGAACAGGGTCCCTTCAGCAAAATC  800

seq1  TTGCTGGCATATGCAATAGTGTCTGGGTTTGGTGGCTGATTATGGGATGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGGCATATGCAATAGTGTCTGGGTTTGGTGGCTGATTATGGGATGG  850

seq1  ATCCCCAGAT-GGGGTAGTCTCTG  873
      |||||||||| |||||||||||||
seq2  ATCCCCAGATGGGGGTAGTCTCTG  874


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