BAC Information

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BAC

Clone NameB6Ng01-315B16
Chromosome8 (Build37)
Map Location 33,614,701 - 33,615,833
singlet/doubletsinglet
Overlap genenone
Upstream geneEG330731, LOC100041340, Nrg1, 2010007E15Rik, EG666589, EG546052
Downstream geneLOC100042715, LOC628408, EG628412, Wrn, Purg, LOC666630, Hmgb1-rs17
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-315B16.bB6Ng01-315B16.g
ACCGA105841GA105842
length1,158821
definitionB6Ng01-315B16.b B6Ng01-315B16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagtcgctacctgctatgcagttctgtcacagaagtcaggtagc
agtagtatttacttcagcttgaggcaatggttactaaattgagagagtta
tctaagctcactgacttttaagatcaaaaaggccaaagtcataaatgaag
taattcaaccagagcattataatatatttttatgttttaattataataaa
ttttgaagtaaacctagccactcaaatctgctagcatacaattataatgt
aactttcttataaactggtattagattatctcaacatctgcattttcaat
acgaactcctgttctttatcctattttgagaaatgtttgtcattctccaa
atgtttagaagagtagaggatggactcacattttctcagctttggtttaa
aaataagaatatgaggcattaaaagatgaagtaattatgtcatagctact
ctggagtttataccagatgagcaagcaaaacaaacaaacaaacaaacaaa
caaacacctataaaacttaccaatctgagttgatcctaaggtccagatca
agcttagtgttagtgttttgaataaatgtttccaaaatatcaattaggca
aattgcaccttataattggttgctactactggcccaaaactgaccacaac
taagcaacattgatttttctctgaggagatagcttccatttctacagcct
tcaaaactggaaagtgtttagtttgaaatgtttctgagcattttactcat
gtggccccatgctctctcaaagtataggccaactgcagctacagtgtaaa
ttggtcaaatttctaataagagtttgcttaaaaaaaaacacatttattga
aaacaatagaaaagacgatgattaatagttagctgggccaattaaattct
cttcttgtattgatgccaataaaagatgaagaaagaccagaaagaaacct
aagatcacagtgagaaatgggcaagagccatgaagaaatcatgcacaata
atggaactgctgagaagaagcagaagaataggcaggaggttacaaggtta
ttgttgcacctagctttagggaggctcatgacactagagcttgcacggct
ggcgtgcatggtaacaaatgcacaatggtttcttagaaagatgcctgagc
cgtaagct

gaattcagagcctgttccacaaaatgaaacccatacctggcataattatt
ggggccaaaaaccctgtgggtgcacaagtcataggcttctcatctcctag
gggagaatctattgttattactcaggtaaaggacatagtggtaaactgac
tcctgatagatactccttatacccataggtgaatgcatcgttaaaacttc
accagcaaattttctttttttacaatgaatgctagttagcacagagattc
acaactggccagtgtgcagaggttaagagactgtggagtacttagcacta
aatggcacatatatgtcacatctccttctcctaagactaagggatcaatg
taggaaaagggatggaaagactgcaggagccaaggcattagatgaataaa
gggcataatgatttctagacacaacacaccacttgtcaatataatctcat
agtagttatgatggcatgaataagacctatgcaaacttaagacagacaaa
ttcccagcatagaagtggggagtggtcatgaagtctcagtcctagctaag
aagctcctggtaacagctaccaggaaagggatagcttatattccttaaat
gtgtggatcttcataagacaataaaaattccaggagatggctatatgcct
aaaaatatgtagccagcagtaatttaatttttatgtgtttttaaaagtga
ggactcaaaatagtttaggtataggattgtggggtggatctggaaggagt
tgcatgaggtgagtaaatattactaaataactatttctcaaaaaattctc
aagaattcatgtttaaaaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_33614701_33615833
seq2: B6Ng01-315B16.b_52_1209 (reverse)

seq1  AGCTTACGGGCTCA-GCATC-TTCTAAG-AACCA-TGTGCA-TTGTTACC  45
      ||||||| |||||| ||||| ||||||| ||||| |||||| ||||||||
seq2  AGCTTAC-GGCTCAGGCATCTTTCTAAGAAACCATTGTGCATTTGTTACC  49

seq1  ATGCACG-CAG-CGTGC-AGCTCTAGTGTCATGAG-CTTCCTAAAGCTA-  90
      ||||||| ||| ||||| ||||||||||||||||| || |||||||||| 
seq2  ATGCACGCCAGCCGTGCAAGCTCTAGTGTCATGAGCCTCCCTAAAGCTAG  99

seq1  GTGCA--CATAACC-TGT-ACCT-CTGCCTA-TCTTCTGCT--CTCTCAG  132
      |||||   |||||| ||| |||| ||||||| |||||||||   ||||||
seq2  GTGCAACAATAACCTTGTAACCTCCTGCCTATTCTTCTGCTTCTTCTCAG  149

seq1  CAG-TCCA-TATTGTGCATGATTTC-TCATGGCTCTTG-CCATTTCTCAC  178
      ||| |||| |||||||||||||||| |||||||||||| |||||||||||
seq2  CAGTTCCATTATTGTGCATGATTTCTTCATGGCTCTTGCCCATTTCTCAC  199

seq1  TGTGATCTTAGGTTTC-TTCTGGTCTTTCTTCATCTTT--ATGGCATCAA  225
      |||||||||||||||| |||||||||||||||||||||   |||||||||
seq2  TGTGATCTTAGGTTTCTTTCTGGTCTTTCTTCATCTTTTATTGGCATCAA  249

seq1  TACAAG-AGAGAATTTAATTGGCCCAGCTAACTATTAATCATCGTCTTTT  274
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGAAGAGAATTTAATTGGCCCAGCTAACTATTAATCATCGTCTTTT  299

seq1  CTATTGTTTTCAATAAATGTGTTTTTTTTTAAGCAAACTCTTATTAGAAA  324
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGTTTTCAATAAATGTGTTTTTTTTTAAGCAAACTCTTATTAGAAA  349

seq1  TTTGACCAATTTACACTGTAGCTGCAGTTGGCCTATACTTTGAGAGAGCA  374
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACCAATTTACACTGTAGCTGCAGTTGGCCTATACTTTGAGAGAGCA  399

seq1  TGGGGCCACATGAGTAAAATGCTCAGAAACATTTCAAACTAAACACTTTC  424
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCCACATGAGTAAAATGCTCAGAAACATTTCAAACTAAACACTTTC  449

seq1  CAGTTTTGAAGGCTGTAGAAATGGAAGCTATCTCCTCAGAGAAAAATCAA  474
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTTGAAGGCTGTAGAAATGGAAGCTATCTCCTCAGAGAAAAATCAA  499

seq1  TGTTGCTTAGTTGTGGTCAGTTTTGGGCCAGTAGTAGCAACCAATTATAA  524
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCTTAGTTGTGGTCAGTTTTGGGCCAGTAGTAGCAACCAATTATAA  549

seq1  GGTGCAATTTGCCTAATTGATATTTTGGAAACATTTATTCAAAACACTAA  574
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCAATTTGCCTAATTGATATTTTGGAAACATTTATTCAAAACACTAA  599

seq1  CACTAAGCTTGATCTGGACCTTAGGATCAACTCAGATTGGTAAGTTTTAT  624
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAAGCTTGATCTGGACCTTAGGATCAACTCAGATTGGTAAGTTTTAT  649

seq1  AGGTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTGCTTGCTCATCTGGTAT  674
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTGCTTGCTCATCTGGTAT  699

seq1  AAACTCCAGAGTAGCTATGACATAATTACTTCATCTTTTAATGCCTCATA  724
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCCAGAGTAGCTATGACATAATTACTTCATCTTTTAATGCCTCATA  749

seq1  TTCTTATTTTTAAACCAAAGCTGAGAAAATGTGAGTCCATCCTCTACTCT  774
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTATTTTTAAACCAAAGCTGAGAAAATGTGAGTCCATCCTCTACTCT  799

seq1  TCTAAACATTTGGAGAATGACAAACATTTCTCAAAATAGGATAAAGAACA  824
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAACATTTGGAGAATGACAAACATTTCTCAAAATAGGATAAAGAACA  849

seq1  GGAGTTCGTATTGAAAATGCAGATGTTGAGATAATCTAATACCAGTTTAT  874
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTCGTATTGAAAATGCAGATGTTGAGATAATCTAATACCAGTTTAT  899

seq1  AAGAAAGTTACATTATAATTGTATGCTAGCAGATTTGAGTGGCTAGGTTT  924
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGTTACATTATAATTGTATGCTAGCAGATTTGAGTGGCTAGGTTT  949

seq1  ACTTCAAAATTTATTATAATTAAAACATAAAAATATATTATAATGCTCTG  974
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAAAATTTATTATAATTAAAACATAAAAATATATTATAATGCTCTG  999

seq1  GTTGAATTACTTCATTTATGACTTTGGCCTTTTTGATCTTAAAAGTCAGT  1024
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAATTACTTCATTTATGACTTTGGCCTTTTTGATCTTAAAAGTCAGT  1049

seq1  GAGCTTAGATAACTCTCTCAATTTAGTAACCATTGCCTCAAGCTGAAGTA  1074
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTAGATAACTCTCTCAATTTAGTAACCATTGCCTCAAGCTGAAGTA  1099

seq1  AATACTACTGCTACCTGACTTCTGTGACAGAACTGCATAGCAGGTAGCGA  1124
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTACTGCTACCTGACTTCTGTGACAGAACTGCATAGCAGGTAGCGA  1149

seq1  CTGGAATTC  1133
      |||||||||
seq2  CTGGAATTC  1158


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