BAC Information

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BAC

Clone NameB6Ng01-315K07
Chromosome8 (Build37)
Map Location 78,031,352 - 78,032,402
singlet/doubletsinglet
Overlap gene1700007B14Rik
Upstream geneIsx, Hmgb2l1, Tom1, LOC100039134, Hmox1, Mcm5, Rasd2, LOC675507, LOC384845, LOC666211, LOC100039229
Downstream geneLOC666036, LOC100039185, EG631594, LOC666226
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-315K07.bB6Ng01-315K07.g
ACCGA106233GA106234
length1,0531,144
definitionB6Ng01-315K07.b B6Ng01-315K07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctacaattttttccgagacacagatatatccttatttcccacact
aattctgtctctgattgtcatggagtcattaaccttgtcagagaggacat
tcctcaaaggaggaacttgaaaatatctacagtattaaataaacaagcct
tacactcacagcaaccataacactcttggaggcctacgccctgctggcct
tgttctaggtgcaggaaactgtgtcattttgtcccaagtcagactctgaa
caacttcatgttgtttcctcccttaaaaaaaacaaacaaattaaaaggaa
aaggcactaaaaaacatggagttcatttcgtgttgactaacgcctcctga
gtatggggcctgccctggagtgtggttgatatacctggtattgctcaact
gaagaaaattgattttctttccccctgtagcaatcatttgtgaatagctt
cttggctaggggtaggaatttgtggggattttgtctagcttgagtaggat
atcactcgactctcaagatcttctttcagtagatggtaattaacatacag
acctataactggacagtgttcagaaagcaaaagactttggagtgatctgc
tgccatgaatgtgatgtattcttaataccttcaaggctcagggacctttg
cagaagagaggccaggaaaagttgcaagacctagaggtggtgggatgttt
taaagaaacagcatttccccccagacacaacagggcatttgaactcacaa
agaccacaaccatgaccaagtatctacttttcattgaacatttttaaaaa
gcatgcaatccctgcagaatactacatttaagttttttatagtcatagaa
ttataagtttcataatagacattattagcatataaatatatgtatttgaa
tctgtgattacttccttgtatagattttttgaaaggttaatggatcaaaa
acattatttgctaaggctcaggatattcctttaaaaggtcagatgactat
acacttattcatatacttaacctgaccaaacactcagaacagaatggaat
gtg
gaattctcacctgaggaatactgaatggctgagaagcacctgaaaaatgt
tcagcatccttaatcatcagggaaatggaaatcaaaacaaccctgagatt
ccacctcacaccagtcagcatggctaagttcaaatattcaggtgacagca
gatgctgttgaggatgtgaattaagaggaacactcctccattgttggtgg
tattgaagcttgtactggaaatcagtctggcagttcctcacaaaattgga
catagtactaccggaggatcccacaatacctctcctgggcttatatccag
agatgttccaaccagtaagaaggacacatgctccactatgttcatagcag
ccttatttataatagccagaagctggaaagaacccagatgctcctcaaca
gaggaatggatacagaaaatgtggtacatctacacaatggagtactactc
agctattaaaaagaatgaattcatgaaattcctaggcaatggttggacct
ggagggcatcatcctgagtgaggtaacccaatcacaaaagaactcacatt
atatgtactcactgataagtggatattagcccagaaacttcgaataccca
agatataagatacaatttgcaaaatacatgaaactcaagaagaatgaaga
ccaaagtgttgacactgccccttcttagaattgggaacaaaacacccatg
gaagtagttacagagacaaagtttcgaactgagacaaaaggatggaccat
ttagagactgccatatccagggatccatcccataatcagcctccaaacgc
ctacaccattgcatacactagcaagattttgctgaaaggaccctggtata
gatgtctcttgtgagactatgctggggcctagcaaacacataagtggatg
ctcacagtcagctattggatggatcacagggcccccaatggaggagctag
agaaagtaaccaagagctaaagggatctgcaaccctatagtgacacatat
gaactaaccagtaccccctctagctgcatatatatcagaggatgcttagt
gcatcagtgaaagagaaggtccaatggcacgagccaccttatattgccct
cagtcggtcaatacaggcatatggaatgcggcaggagatgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_78031352_78032402
seq2: B6Ng01-315K07.b_45_1097

seq1  GAATTCTACAATTTTTTCCGAGACACAGATATATCCTTATTTCCCACACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACAATTTTTTCCGAGACACAGATATATCCTTATTTCCCACACT  50

seq1  AATTCTGTCTCTGATTGTCATGGAGTCATTAACCTTGTCAGAGAGGACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTGTCTCTGATTGTCATGGAGTCATTAACCTTGTCAGAGAGGACAT  100

seq1  TCCTCAAAGGAGGAACTTGAAAATATCTACAGTATTAAATAAACAAGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAAAGGAGGAACTTGAAAATATCTACAGTATTAAATAAACAAGCCT  150

seq1  TACACTCACAGCAACCATAACACTCTTGGAGGCCTACGCCCTGCTGGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTCACAGCAACCATAACACTCTTGGAGGCCTACGCCCTGCTGGCCT  200

seq1  TGTTCTAGGTGCAGGAAACTGTGTCATTTTGTCCCAAGTCAGACTCTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTAGGTGCAGGAAACTGTGTCATTTTGTCCCAAGTCAGACTCTGAA  250

seq1  CAACTTCATGTTGTTTCCTCCCTTAAAAAAAACAAACAAATTAAAAGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTCATGTTGTTTCCTCCCTTAAAAAAAACAAACAAATTAAAAGGAA  300

seq1  AAGGCACTAAAAAACATGGAGTTCATTTCGTGTTGACTAACGCCTCCTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCACTAAAAAACATGGAGTTCATTTCGTGTTGACTAACGCCTCCTGA  350

seq1  GTATGGGGCCTGCCCTGGAGTGTGGTTGATATACCTGGTATTGCTCAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGGGGCCTGCCCTGGAGTGTGGTTGATATACCTGGTATTGCTCAACT  400

seq1  GAAGAAAATTGATTTTCTTTCCCCCTGTAGCAATCATTTGTGAATAGCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAATTGATTTTCTTTCCCCCTGTAGCAATCATTTGTGAATAGCTT  450

seq1  CTTGGCTAGGGGTAGGAATTTGTGGGGATTTTGTCTAGCTTGAGTAGGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCTAGGGGTAGGAATTTGTGGGGATTTTGTCTAGCTTGAGTAGGAT  500

seq1  ATCACTCGACTCTCAAGATCTTCTTTCAGTAGATGGTAATTAACATACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTCGACTCTCAAGATCTTCTTTCAGTAGATGGTAATTAACATACAG  550

seq1  ACCTATAACTGGACAGTGTTCAGAAAGCAAAAGACTTTGGAGTGATCTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTATAACTGGACAGTGTTCAGAAAGCAAAAGACTTTGGAGTGATCTGC  600

seq1  TGCCATGAATGTGATGTATTCTTAATACCTTCAAGGCTCAGGGACCTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATGAATGTGATGTATTCTTAATACCTTCAAGGCTCAGGGACCTTTG  650

seq1  CAGAAGAGAGGCCAGGAAAAGTTGCAAGACCTAGAGGTGGTGGGATGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGAGAGGCCAGGAAAAGTTGCAAGACCTAGAGGTGGTGGGATGTTT  700

seq1  TAAAGAAACAGCATTTCCCCCCAGACACAACAGGGCATTTGAACTCACAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAAACAGCATTTCCCCCCAGACACAACAGGGCATTTGAACTCACAA  750

seq1  AGACCACAACCATGACCAAGTATCTACTTTTCATTGAACATTTTTAAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCACAACCATGACCAAGTATCTACTTTTCATTGAACATTTTTAAAAA  800

seq1  GCATGCAATCCCTGCAGAATACTACATTTAAGTTTTTTATAGTCATAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCAATCCCTGCAGAATACTACATTTAAGTTTTTTATAGTCATAGAA  850

seq1  TTATAAGTTTCATAATAGACATTATTAGCATATAAATATATGTATTTGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAGTTTCATAATAGACATTATTAGCATATAAATATATGTATTTGAA  900

seq1  TCTGTGATTACTTCCTTGTATAGATTTTTTGAAAGGTTAATGGATCAAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGATTACTTCCTTGTATAGATTTTTTGAAAGGTTAATGGATCAAAA  950

seq1  ACATTATTTGCTAAGGCTCAGGATATTCCTTTAAAAGGTCAGATGACTAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTATTTGCTAAGGCTCAGGATATTCCTTTAAAAGGTCAGATGACTAT  1000

seq1  ACACTTAATCATATACTTAACCTGACCAAACACTCAG-ACAG-ATGGAAT  1048
      ||||||| ||||||||||||||||||||||||||||| |||| |||||||
seq2  ACACTTATTCATATACTTAACCTGACCAAACACTCAGAACAGAATGGAAT  1050

seq1  GTG  1051
      |||
seq2  GTG  1053