BAC Information

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BAC

Clone NameB6Ng01-315N01
Chromosome8 (Build37)
Map Location 116,005,064 - 116,116,024
singlet/doubletdoublet
Overlap genenone
Upstream geneCntnap4, LOC100042061
Downstream geneMon1b, 4930481F22Rik, Adamts18, Nudt7, AI427515, Clec3a, Wwox
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-315N01.bB6Ng01-315N01.g
ACCGA106365GA106366
length435896
definitionB6Ng01-315N01.b B6Ng01-315N01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(116,005,064 - 116,005,504)(116,115,130 - 116,116,024)
sequence
atctttagaaactgacttatttttattttttaatgtatgtatgtgtataa
ttgggtgtggatatgtgcatgtgggtacctgcagaggtcagaggagggtg
tcaggtcttttggagctggatttacagatggttgtgagccacacaacatg
gttgctgaaaaccgaactcaggtcttctgcaggagcaccaaatatcctta
gctgctgggccatctctctggctccttaaagcatgatttttttttaaaaa
aattataattaaatgacatagatattaattgtagaaaactgggggggggg
taactaaaccaaaataatatcaaacctaggtgtgatagctcatgcctata
atctcaaaacatgagagaataaggcaggaggatttctatgagtgagaaac
catcatgagctctctggggagttccacagcagcct

gaattctatcccatgggactccttctcttgttcatcttttgttacctgaa
ctccctcacttcctcactttatcttttatgccaggttaccaatattgttc
cattttagacttttccccccctcatcttatatgtttaatattgacatcag
ttatgggttcagtggtgatgctgtaggaagtagagttagctgcatggtga
ttcagtaatgtgagccattagaggtgatgaaggcactgaatattaggatg
ggtttctctgacaacagtagtcgtggctcttgtctctccatgagttgtat
atgatttatgagaagtaggtaacaggtgctggactcagtggtaggtaaat
ccccaacgacagaacagtattctaacaattgtacagaggggaaaagcaat
aacaaagtggttagcttttcaaatatcttgtatggagtagaagtaggaat
agaggggctttatccttctttctgtaccacgagtgaacacctattggctt
tattatttgaaaataaaggccagtgctcgagactttcattaggagttctg
acatttcctaaagcaactttcgttgacattctacaaacaatgacatatag
agttccaaaatttttctctgtcaacacgctttataaaacttttgacttct
gtaatatttgtcatttctggaagaatttcagtacaaatctgaggaccttt
cactcgggatacaaaagattcttgacttgctgtctcctctttcggatgta
aataatttgtactgagttgtcatttgctggggctcaaaattgcctttaca
tcttctcaggtaacagtatttcaggaaagcttgaaaataatttgtgctgc
tgctgttattgttgtgatttttttgtggtggtgggtagtgatggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_116005064_116005504
seq2: B6Ng01-315N01.b_46_486

seq1  GAATTCATCTTTAGAAACTGACTTATTTTTATTTTTTAATGTATGTATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCTTTAGAAACTGACTTATTTTTATTTTTTAATGTATGTATGT  50

seq1  GTATAATTGGGTGTGGATATGTGCATGTGGGTACCTGCAGAGGTCAGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAATTGGGTGTGGATATGTGCATGTGGGTACCTGCAGAGGTCAGAGG  100

seq1  AGGGTGTCAGGTCTTTTGGAGCTGGATTTACAGATGGTTGTGAGCCACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGTCAGGTCTTTTGGAGCTGGATTTACAGATGGTTGTGAGCCACAC  150

seq1  AACATGGTTGCTGAAAACCGAACTCAGGTCTTCTGCAGGAGCACCAAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGGTTGCTGAAAACCGAACTCAGGTCTTCTGCAGGAGCACCAAATA  200

seq1  TCCTTAGCTGCTGGGCCATCTCTCTGGCTCCTTAAAGCATGATTTTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAGCTGCTGGGCCATCTCTCTGGCTCCTTAAAGCATGATTTTTTTT  250

seq1  TAAAAAAATTATAATTAAATGACATAGATATTAATTGTAGAAAACTGGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAATTATAATTAAATGACATAGATATTAATTGTAGAAAACTGGGG  300

seq1  GGGGGGTAACTAAACCAAAATAATATCAAACCTAGGTGTGATAGCTCATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGTAACTAAACCAAAATAATATCAAACCTAGGTGTGATAGCTCATG  350

seq1  CCTATAATCTCAAAACATGAGAGAATAAGGCAGGAGGATTTCTATGAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATAATCTCAAAACATGAGAGAATAAGGCAGGAGGATTTCTATGAGTG  400

seq1  AGAAACCATCATGAGCTCTCTGGGGAGTTCCACAGCAGCCT  441
      |||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACCATCATGAGCTCTCTGGGGAGTTCCACAGCAGCCT  441


seq1: chr8_116115130_116116024
seq2: B6Ng01-315N01.g_66_961 (reverse)

seq1  CACCATCACTA-CCACCACCACAAAAAAATCACAACAATAACAGCAGCAG  49
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CACCATCACTACCCACCACCACAAAAAAATCACAACAATAACAGCAGCAG  50

seq1  CACAAATTATTTTCAAGCTTTCCTGAAATACTGTTACCTGAGAAGATGTA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAATTATTTTCAAGCTTTCCTGAAATACTGTTACCTGAGAAGATGTA  100

seq1  AAGGCAATTTTGAGCCCCAGCAAATGACAACTCAGTACAAATTATTTACA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAATTTTGAGCCCCAGCAAATGACAACTCAGTACAAATTATTTACA  150

seq1  TCCGAAAGAGGAGACAGCAAGTCAAGAATCTTTTGTATCCCGAGTGAAAG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGAAAGAGGAGACAGCAAGTCAAGAATCTTTTGTATCCCGAGTGAAAG  200

seq1  GTCCTCAGATTTGTACTGAAATTCTTCCAGAAATGACAAATATTACAGAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCAGATTTGTACTGAAATTCTTCCAGAAATGACAAATATTACAGAA  250

seq1  GTCAAAAGTTTTATAAAGCGTGTTGACAGAGAAAAATTTTGGAACTCTAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAAGTTTTATAAAGCGTGTTGACAGAGAAAAATTTTGGAACTCTAT  300

seq1  ATGTCATTGTTTGTAGAATGTCAACGAAAGTTGCTTTAGGAAATGTCAGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCATTGTTTGTAGAATGTCAACGAAAGTTGCTTTAGGAAATGTCAGA  350

seq1  ACTCCTAATGAAAGTCTCGAGCACTGGCCTTTATTTTCAAATAATAAAGC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTAATGAAAGTCTCGAGCACTGGCCTTTATTTTCAAATAATAAAGC  400

seq1  CAATAGGTGTTCACTCGTGGTACAGAAAGAAGGATAAAGCCCCTCTATTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGGTGTTCACTCGTGGTACAGAAAGAAGGATAAAGCCCCTCTATTC  450

seq1  CTACTTCTACTCCATACAAGATATTTGAAAAGCTAACCACTTTGTTATTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTCTACTCCATACAAGATATTTGAAAAGCTAACCACTTTGTTATTG  500

seq1  CTTTTCCCCTCTGTACAATTGTTAGAATACTGTTCTGTCGTTGGGGATTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCCCCTCTGTACAATTGTTAGAATACTGTTCTGTCGTTGGGGATTT  550

seq1  ACCTACCACTGAGTCCAGCACCTGTTACCTACTTCTCATAAATCATATAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACCACTGAGTCCAGCACCTGTTACCTACTTCTCATAAATCATATAC  600

seq1  AACTCATGGAGAGACAAGAGCCACGACTACTGTTGTCAGAGAAACCCATC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCATGGAGAGACAAGAGCCACGACTACTGTTGTCAGAGAAACCCATC  650

seq1  CTAATATTCAGTGCCTTCATCACCTCTAATGGCTCACATTACTGAATCAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATATTCAGTGCCTTCATCACCTCTAATGGCTCACATTACTGAATCAC  700

seq1  CATGCAGCTAACTCTACTTCCTACAGCATCACCACTGAACCCATAACTGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAGCTAACTCTACTTCCTACAGCATCACCACTGAACCCATAACTGA  750

seq1  TGTCAATATTAAACATATAAGATGAGGGGGGGAAAAGTCTAAAATGGAAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAATATTAAACATATAAGATGAGGGGGGGAAAAGTCTAAAATGGAAC  800

seq1  AATATTGGTAACCTGGCATAAAAGATAAAGTGAGGAAGTGAGGGAGTTCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTGGTAACCTGGCATAAAAGATAAAGTGAGGAAGTGAGGGAGTTCA  850

seq1  GGTAACAAAAGATGAACAAGAGAAGGAGTCCCATGGGATAGAATTC  895
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAACAAAAGATGAACAAGAGAAGGAGTCCCATGGGATAGAATTC  896


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