BAC Information

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BAC

Clone NameB6Ng01-316P05
Chromosome8 (Build37)
Map Location 80,258,365 - 80,259,257
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039211, LOC384847, Nr3c2, Arhgap10, LOC100039235, AI931714, Tmem34, Ednra
Downstream geneEG622803, Ttc29, Pou4f2, LOC100039422, Rbmxrt, Slc10a7, LOC100039466
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-316P05.bB6Ng01-316P05.g
ACCGA107218GA107219
length8931,169
definitionB6Ng01-316P05.b B6Ng01-316P05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactttgtagaccaggctggcctcaaactcaaagagatgcatctg
cctccacttcctaagtgctaggactaaaggtgtgcaccaccaccactggc
taaaatttaagggaataaaaattagaagccaggcagttgtggcccatgcc
tttaatctcagtacttaggaggcagaggtaggcagatttctgagttcaag
gccagcctggtctacagagtgagttccaggacaaccaggctatacagaaa
aatcctgtcttgaaaaaccaataaataaataaataaataataaaaattag
aactagaaggctcaattgttatatttttaacacagatcttggagctgaca
acctgaaagtagaagagtgattgctgcatgttacaaagagtaatacatgt
gtgcttcttgcaatgatcacaaagaagcttgtgatgaagaatatgtgtca
ataaaaaagaacttatgcaggataagagaatgcacctggagattctaaaa
aggtaagttagacattagaaaagggcttttgcacacacaagacctacact
ggttcaagccagactcccagcactgagaagggaagtgcacacaaagtccc
acccctaaccaagaagctacttaaaattaattgctgctaggaaaagggaa
agtcagttttctgcagtggaatgttactgagtatgtcaatcatactccag
gtcaagtcccatgcccaggtgtagttggtcaacacaaaatagattccaag
gtgagagttgttgtttcgggtgattgttttgtttgcttgattgcttgtat
ttgctttgtcctttagatttttcatttgttcattttgagtttcatttttg
gggtgatggtgtttatcttgagagagagtgggagaagaaagag
gaattctaagcccttgatcttggtcaaggacgttctagggctgttggaac
actggcaaaaggctttagccatgtcagaattcaattttaaaaagcactta
taatagaaaaatactgaaagagagcacgtggacctatacactagactaac
gcggtaatggaacacaggaatgaaaaattaatgtatgggtagagaacgct
agactccaggaggagagcttccttaaaactcttttgcctcatgagtgact
tttaagcctttctgcttgtccagctgactcgaccagagagcttagcagta
ctgagaaaaagccaataccagatcaatagctgcataccatgtaccagaag
taccatgaatggtttgttcaagtaaggacactacatctggtatagcagct
gcaatcagagttactgcctgacttagttttcagtagtcaaccgttttttt
ccatgatctatctgtcttctgtactgaccaggtaagaaggttaaagggag
gtgtggtgggaccaccactctgcatctttcagatccttgttggagacact
aatttctccaggaatacgatactgtttttgattcattattttctttggca
gaggcaactctaaaggcttccatttagcctttccaaccataatagccctc
attccactagtcagggaaccaatgtgagaatcttgctaccttctaaatac
atctattccaattatacattctgcaacaaggggaaataaccacaacatga
gttcagggacacactggacctactgtgagttggacatcagccaaaactcc
attaattgcctggcctccataagcccctacttaaagcctttccatggttt
ccaaagtcccaaaacccacattcttccaaacaaaagcacagtcaggccta
tcattaacaataccccattagaaaggacaatataaccccaatgtgttccc
atttaagaccaatctgccttctattttgagactaggcctgatttcaaaca
gcgccagcttcagaatagactctaagtccagaactagattgtagacccca
gcttctagtacggatcatataatcagtacctgtcataaactccccacaag
aacagccttggatgtacatctcaaaattggtattaccttattccagaaat
tggaccatcttgcgacact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_80258365_80259257
seq2: B6Ng01-316P05.b_48_940 (reverse)

seq1  CTCTTTCTTCTCCCACTCTCTCTCAAGATAAACACCATCACCCCAAAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTCTTCTCCCACTCTCTCTCAAGATAAACACCATCACCCCAAAAAT  50

seq1  GAAACTCAAAATGAACAAATGAAAAATCTAAAGGACAAAGCAAATACAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTCAAAATGAACAAATGAAAAATCTAAAGGACAAAGCAAATACAAG  100

seq1  CAATCAAGCAAACAAAACAATCACCCGAAACAACAACTCTCACCTTGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCAAGCAAACAAAACAATCACCCGAAACAACAACTCTCACCTTGGAA  150

seq1  TCTATTTTGTGTTGACCAACTACACCTGGGCATGGGACTTGACCTGGAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTTTGTGTTGACCAACTACACCTGGGCATGGGACTTGACCTGGAGT  200

seq1  ATGATTGACATACTCAGTAACATTCCACTGCAGAAAACTGACTTTCCCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTGACATACTCAGTAACATTCCACTGCAGAAAACTGACTTTCCCTT  250

seq1  TTCCTAGCAGCAATTAATTTTAAGTAGCTTCTTGGTTAGGGGTGGGACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAGCAGCAATTAATTTTAAGTAGCTTCTTGGTTAGGGGTGGGACTT  300

seq1  TGTGTGCACTTCCCTTCTCAGTGCTGGGAGTCTGGCTTGAACCAGTGTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGCACTTCCCTTCTCAGTGCTGGGAGTCTGGCTTGAACCAGTGTAG  350

seq1  GTCTTGTGTGTGCAAAAGCCCTTTTCTAATGTCTAACTTACCTTTTTAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGTGTGTGCAAAAGCCCTTTTCTAATGTCTAACTTACCTTTTTAGA  400

seq1  ATCTCCAGGTGCATTCTCTTATCCTGCATAAGTTCTTTTTTATTGACACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCAGGTGCATTCTCTTATCCTGCATAAGTTCTTTTTTATTGACACA  450

seq1  TATTCTTCATCACAAGCTTCTTTGTGATCATTGCAAGAAGCACACATGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTTCATCACAAGCTTCTTTGTGATCATTGCAAGAAGCACACATGTA  500

seq1  TTACTCTTTGTAACATGCAGCAATCACTCTTCTACTTTCAGGTTGTCAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCTTTGTAACATGCAGCAATCACTCTTCTACTTTCAGGTTGTCAGC  550

seq1  TCCAAGATCTGTGTTAAAAATATAACAATTGAGCCTTCTAGTTCTAATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGATCTGTGTTAAAAATATAACAATTGAGCCTTCTAGTTCTAATTT  600

seq1  TTATTATTTATTTATTTATTTATTGGTTTTTCAAGACAGGATTTTTCTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATTTATTTATTTATTTATTGGTTTTTCAAGACAGGATTTTTCTGT  650

seq1  ATAGCCTGGTTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCCTTGAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCTGGTTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCCTTGAAC  700

seq1  TCAGAAATCTGCCTACCTCTGCCTCCTAAGTACTGAGATTAAAGGCATGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAATCTGCCTACCTCTGCCTCCTAAGTACTGAGATTAAAGGCATGG  750

seq1  GCCACAACTGCCTGGCTTCTAATTTTTATTCCCTTAAATTTTAGCCAGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACAACTGCCTGGCTTCTAATTTTTATTCCCTTAAATTTTAGCCAGTG  800

seq1  GTGGTGGTGCACACCTTTAGTCCTAGCACTTAGGAAGTGGAGGCAGATGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGGTGCACACCTTTAGTCCTAGCACTTAGGAAGTGGAGGCAGATGC  850

seq1  ATCTCTTTGAGTTTGAGGCCAGCCTGGTCTACAAAGTGAATTC  893
      |||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTTTGAGTTTGAGGCCAGCCTGGTCTACAAAGTGAATTC  893