BAC Information

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BAC

Clone NameB6Ng01-317O11
Chromosome8 (Build37)
Map Location 69,410,691 - 69,411,672
singlet/doubletsinglet
Overlap geneBC053440
Upstream geneMarch1, 1810029B16Rik, Tktl2, Npy5r, Npy1r
Downstream geneLOC665453, Nat1, Nat2, LOC100041265, Nat3, Psd3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-317O11.bB6Ng01-317O11.g
ACCGA107929GA107930
length983969
definitionB6Ng01-317O11.b B6Ng01-317O11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggtaatttgctt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatccttgcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaacccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctgattttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatattgttcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagtttttatcata
cagatctttcacttccttagttagagtcacgccgagatattttatattat
ttgtgactattgagaaggtgtgtttccctaatt
gaattctctaattttagaccatggtaaaatactagacattcatagaagac
ataaagatttcttagaaataaatcttactcatctttatctataattctaa
tgtacatatgcaaactttataatggttttaaatattatattctatgaatg
caacattgaatttgtataagaaagatgattttaggggatgaaagtaaaat
ttactcaaatcagtcactaaaacttctcccaattaaaaatgtttctccct
ctcactcctgagaaaacaattaacctgatactacagtgttctgattctct
tctattagagaaaagctttgctttgccttacagagcgaatttattttatg
gactctcatttgactgtgcgctcagtaagtcgtctttgctgttttctcct
tacccacctgacactcttctactgtcacagtttgctgtattgtgtattgt
aaggagtaaaattggagctgacatgaggcttgtgtctgatcttgagtgag
aaagtcatagaatgatgtctctgatctcttttggatctgatgatgtgtaa
aagtagcttagtcttcattactgctttctttggctttctttgtcattctc
tagcagctggcatgacaatgaatctaagcaggaagttggacttctggcca
gggaatggaatatatattccatatctgaatattgctaattttaggatttt
taaagttacctatctgaagatttctaggaattaaatagaccaaaacccac
ccaatcgaagaccagagtatccagcttaataaatacagttattagggctt
aaaaacaaaccaagtaaccaaatgttttgtattatttagatgctaactca
catatgataggtagtatagtgaaatgagcacctttcctctgtcagtggga
gcagcagttgagcagtactacttgtctcatgccacgatgatcatgcatcc
ttactttttatctgcaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_69410691_69411672
seq2: B6Ng01-317O11.g_70_1038

seq1  GAATTCTCTAATTTTAGACCATGGTAAAATACTAGACATTCATAGAAGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTAATTTTAGACCATGGTAAAATACTAGACATTCATAGAAGAC  50

seq1  ATAAAGATTTCTTAGAAATAAATCTTACTCATCTTTATCTATAATTCTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGATTTCTTAGAAATAAATCTTACTCATCTTTATCTATAATTCTAA  100

seq1  TGTACATATGCAAACTTTATAATGGTTTTAAATATTATATTCTATGAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACATATGCAAACTTTATAATGGTTTTAAATATTATATTCTATGAATG  150

seq1  CAACATTGAATTTGTATAAGAAAGATGATTTTAGGGGATGAAAGTAAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATTGAATTTGTATAAGAAAGATGATTTTAGGGGATGAAAGTAAAAT  200

seq1  TTACTCAAATCAGTCACTAAAACTTCTCCCAATTAAAAATGTTTCTCCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCAAATCAGTCACTAAAACTTCTCCCAATTAAAAATGTTTCTCCCT  250

seq1  CTCACTCCTGAGAAAACAATTAACCTGATACTACAGTGTTCTGATTCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTCCTGAGAAAACAATTAACCTGATACTACAGTGTTCTGATTCTCT  300

seq1  TCTATTAGAGAAAAGCTTTGCTTTGCCTTACAGAGCGAATTTATTTTATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTAGAGAAAAGCTTTGCTTTGCCTTACAGAGCGAATTTATTTTATG  350

seq1  GACTCTCATTTGACTGTGCGCTCAGTAAGTCGTCTTTGCTGTTTTCTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTCATTTGACTGTGCGCTCAGTAAGTCGTCTTTGCTGTTTTCTCCT  400

seq1  TACCCACCTGACACTCTTCTACTGTCACAGTTTGCTGTATTGTGTATTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCACCTGACACTCTTCTACTGTCACAGTTTGCTGTATTGTGTATTGT  450

seq1  AAGGAGTAAAATTGGAGCTGACATGAGGCTTGTGTCTGATCTTGAGTGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGTAAAATTGGAGCTGACATGAGGCTTGTGTCTGATCTTGAGTGAG  500

seq1  AAAGTCATAGAATGATGTCTCTGATCTCTTTTGGATCTGATGATGTGTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCATAGAATGATGTCTCTGATCTCTTTTGGATCTGATGATGTGTAA  550

seq1  AAGTAGCTTAGTCTTCATTACTGCTTTCTTTGGCTTTCTTTGTCATTCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGCTTAGTCTTCATTACTGCTTTCTTTGGCTTTCTTTGTCATTCTC  600

seq1  TAGCAGCTGGCATGACAATGAATCTAAGCAGGAAGTTGGACTTCTGGCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGCTGGCATGACAATGAATCTAAGCAGGAAGTTGGACTTCTGGCCA  650

seq1  GGGAATGGAATATATATTCCATATCTGAATATTGCTAATTTTAGGATTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATGGAATATATATTCCATATCTGAATATTGCTAATTTTAGGATTTT  700

seq1  TAAAGTTACCTATCTGAAGATTTCTAGGAATTAAATAGACCAAAA-CCAA  749
      ||||||||||||||||||||||||||||||||||||||||||||| ||| 
seq2  TAAAGTTACCTATCTGAAGATTTCTAGGAATTAAATAGACCAAAACCCAC  750

seq1  CCAATCGAAGAACCAGAGTATCCAGCTTAATAAATACAGTTATTAGGGCT  799
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CCAATCGAAG-ACCAGAGTATCCAGCTTAATAAATACAGTTATTAGGGCT  799

seq1  TAAAAACAAA-CAAGTAACCAAATGTTTTGTTATTATTTTAGATGCTAAC  848
      |||||||||| ||||||||||||||||||| ||||| |||||||||||||
seq2  TAAAAACAAACCAAGTAACCAAATGTTTTG-TATTA-TTTAGATGCTAAC  847

seq1  TCACATATTGATAGGTAGTATTAAGTTGAAATGAGCACCTTTCCTCTGGT  898
      ||||||| |||||||||||||  || ||||||||||||||||||||| ||
seq2  TCACATA-TGATAGGTAGTAT--AG-TGAAATGAGCACCTTTCCTCT-GT  892

seq1  CAGTGGGAAGCAGCAGTTTGAGCAAGTAACTAC-TGTCTCATTGGCAAAC  947
      ||||||| |||||||| |||||| ||| ||||| ||||||||  || |  
seq2  CAGTGGG-AGCAGCAG-TTGAGC-AGT-ACTACTTGTCTCAT--GCCA--  934

seq1  CGATGATCAGTGCATCTCTAC-TTTTATCTGCAAGG  982
      ||||||||| ||||||  ||| ||||||||||||||
seq2  CGATGATCA-TGCATCCTTACTTTTTATCTGCAAGG  969