MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-317O12
Chromosome	8 (Build37)
Map Location	76,035,868 - 76,037,071
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Crsp7, LOC100042439, 9130011J15Rik, Tmem38a, Nwd1, Sin3b, F2rl3, Large, LOC100039001, LOC666134
Downstream gene	Crry-ps, LOC666146
Link	Open Mouse BAC browser

Click to get alignment info.

name	Crsp7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70625 MGI:1917875
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042439 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042439
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs

name	9130011J15Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66818 MGI:1914068
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmem38a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74166 MGI:1921416
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nwd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319555 MGI:2442268
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sin3b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20467 MGI:107158
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	F2rl3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14065 MGI:1298207
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Large (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16795 MGI:1342270
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039001 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039001
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs

name	LOC666134 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666134
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 44 Proteins pseudo : _no_value

name	Crry-ps (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12947 MGI:88514
definition	gene_synonym : Crrx; Mcp-ps; mCRX note : complement receptor related protein, pseudogene pseudo : _no_value

name	LOC666146 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666146
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Crsp7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142350326 GeneID:70625 MGI:1917875
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cofactor required for Sp1 transcriptional activation, subunit 7 transcript_id : NM_027485.2

name	LOC100042439 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258918 GeneID:100042439
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs product : hypothetical protein LOC100042439 transcript_id : XM_001478638.1

name	9130011J15Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144922668 GeneID:66818 MGI:1914068
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9130011J15 gene transcript_id : NM_172396.3

name	Tmem38a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21362330 GeneID:74166 MGI:1921416
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 38a transcript_id : NM_144534.1

name	Nwd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142381392 GeneID:319555 MGI:2442268
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NACHT and WD repeat domain containing 1 transcript_id : NM_176940.3

name	Sin3b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94158896 GeneID:20467 MGI:107158
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transcriptional regulator, SIN3B (yeast) transcript_id : NM_009188.2

name	F2rl3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803010 GeneID:14065 MGI:1298207
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coagulation factor II (thrombin) receptor-like 3 transcript_id : NM_007975.3

name	Large (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754505 GeneID:16795 MGI:1342270
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : like-glycosyltransferase transcript_id : NM_010687.1

name	LOC100039001 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258922 GeneID:100039001
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs product : hypothetical protein LOC100039001 transcript_id : XM_001472068.1

name	Crsp7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28466971 CCDS:CCDS22416.1 GeneID:70625 MGI:1917875
definition	GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006952 - defense response [Evidence IEA] codon_start : 1 exception : mismatches in translation note : cofactor required for Sp1 transcriptional activation, subunit 7, 70kDa product : transcriptional co-activator CRSP7 homolog protein_id : NP_081761.1

name	LOC100042439 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258919 GeneID:100042439
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478688.1

name	9130011J15Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369485 GeneID:66818 MGI:1914068
definition	codon_start : 1 product : hypothetical protein LOC66818 protein_id : NP_765984.1

name	Tmem38a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21362331 CCDS:CCDS22417.1 GeneID:74166 MGI:1921416
definition	codon_start : 1 note : Mitsugumin33A product : transmembrane protein 38a protein_id : NP_653117.1

name	Nwd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28892747 CCDS:CCDS22418.1 GeneID:319555 MGI:2442268
definition	codon_start : 1 exception : mismatches in translation product : NACHT and WD repeat domain containing 1 protein_id : NP_795914.1

name	Sin3b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28212270 GeneID:20467 MGI:107158
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] [Evidence IDA]; GO:0003714 - transcription corepressor activity [Evidence IDA] GO_process : GO:0045892 - negative regulation of transcription, DNA-dependent [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : transcriptional regulator, SIN3 yeast homolog B product : transcriptional regulator, SIN3B protein_id : NP_033214.1

name	F2rl3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982379 CCDS:CCDS22419.1 GeneID:14065 MGI:1298207
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007596 - blood coagulation [Evidence IEA]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : coagulation factor II (thrombin) receptor-like 3 protein_id : NP_032001.2

name	Large (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754506 CCDS:CCDS22420.1 GeneID:16795 MGI:1342270
definition	GO_component : GO:0030173 - integral to Golgi membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA]; GO:0016758 - transferase activity, transferring hexosyl groups [Evidence IEA] GO_process : GO:0016051 - carbohydrate biosynthesis [Evidence IEA]; GO:0009101 - glycoprotein biosynthesis [Evidence NAS]; GO:0006688 - glycosphingolipid biosynthesis [Evidence NAS]; GO:0046716 - muscle maintenance [Evidence IMP]; GO:0042552 - myelination [Evidence TAS]; GO:0007605 - sensory perception of sound [Evidence IMP]; GO:0007268 - synaptic transmission [Evidence IMP] codon_start : 1 note : myodystrophy product : like-glycosyltransferase protein_id : NP_034817.1

name	LOC100039001 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258923 GeneID:100039001
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472118.1

name	LOC666134 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666134
definition	number : 2 pseudo : _no_value

name	LOC666134 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666134
definition	number : 1 pseudo : _no_value

name	LOC666146 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666146
definition	number : 1 pseudo : _no_value

clone name	MSMg01-495L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-206E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-207N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363E16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-385C18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-197H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-194E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343A09
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-317O12.b	B6Ng01-317O12.g
ACC	GA107931	GA107932
length	1,186	1,182
definition	B6Ng01-317O12.b	B6Ng01-317O12.g
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattcacacccaaacatgccacgtttcatcaagaagtttatttcctgct gaagactttcacaggtaaaatcaagtcaatcatttcaatttcactgaaca gagagaattttgtacactaattttaggtatttctcacaaatgtccaattg ttcttttctggattttctcttgcagaagtcagagctggttgagaagattt atatggatggaatgcaatcggagtaattggtttgcatcaagcaaaggaac caataaattagcttaaacatgacatttcagaggcagccttctatatggct cctattctctggccctgaattgttgctcattaattggtagtttgttctta gtccagctgcctgtttctaacactgggtaatgtattatgagataatctac tttctgtgacttcacacagttcccatggcaactgtcagtgccatttccct gcagaacagctgcttcgtttgtaccaaatgtgttagagaaatgtaaacat cttcgattaaaaaaaaaaaagtccagcaaaatgacactccaagcagagag tgacattaatataattacagcaaggaagtggtctataattatttcaacct ctttcctgagagtaaaatcgaaaagatgtaggattttggtgttttaagat ttttttcccacctttttggtttaggcaaggaaaattaaagaaaggtttcc ttgacaagacatacttgaaaatacataccactccttaaaaactgaagaaa aaaaaatcattcactgaaatcagtttcctttttttaattagatattttct ttacctacatttcaaattttatgctctttcctaatttcccctccaaaaat cccctatcctctccccacctcccctgctccccatgcaccccagcccaccc actcctacttcctagcccaggcattcgcctatattgggccatagaaccct tcacaggaccaaggcctctcctcccattgatgactgactaggccatcctc agctacatatgcaactagaaccatgagtctctcatgtgtttgctttcagt ggtgatttagtcccaaggagctcagatatggcacggggaaaattctgaac agaacacatgcttgtgcctggtacgatccaggattgtccatggactactt aattgcaagctctgtaagcagaactgtcaatagaaa	gaattctcacctgaggaataccaaatggcagtgaaacacctgaaaaaatg ttcaacatccttaaacatcagggaaatgcaaatcaaaacaaccctgagat tccagttcactccagtcagaatggctaagatcaaaaactcaggtggcagc agatgctgacgaggatgtggagaaaggggaacactcctccattgttggtg ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca gaaaattggacatagtactactggaggatcccgcaatacctctcctgggc atatatccagaagatgtcccaacaggtaagaaggacacatgctccactat gttcatagcagccttatttataatagccagaagctggaaagaacccagat gcccctcaacagaggaatggatacagaaaatatggtacatttacacaatg gaatattactcagctattaaaaaatgaatttatgaaatttctaggcaaat ggatggacctggagggtatcctcctgtgtgaggtaacccaatcacaaagg aactcccacaatatgcactcactgataagtggctattagcccagaaactt aggatacccaagatataagatacaacttgcgaaatgcatgaaaatcaaga agaacgaagaccaaagtgtggacactttcccttttcttagaaatgggaac aaaacacccatggaaggagttatagagacaaatttggagctgtgacgaaa gaatggaccatctagtgattgccatatgcagggatacaccctgtaatcag cttccaaatgctgacaccattgcatacactagcaagattttgctgaaagg acccagatatagctctgtcttgtgagactatgccggggcctagcaacaca gaagtggatgatcacagtcagctattggatgggtcacacgccccaatgga ggagctagagaaattacccagagctaaagggaactgcaaccctataggtg gacacatatgagtaacagtaccttgagctcttgtctctagctgcatatgt atcaaaaaatgctagtcgacatcactgcagagaggtccattgacttgcca ctctatattgcccagttacaggaaatcagtcaacggtattgcgttgctta ggaatttcacactgcgattgtgacttatcgca
quality values	Open. Hide. 62 41 34 41 62 37 26 47 37 62 62 47 24 62 62 47 42 54 62 62 59 43 62 62 62 62 62 46 43 62 59 62 59 56 62 62 56 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 49 54 62 62 62 62 62 59 62 59 62 62 59 62 62 59 62 62 59 59 62 62 62 62 62 62 54 54 62 62 62 62 62 54 62 62 49 49 62 62 54 54 54 62 54 62 62 62 54 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 49 58 58 58 54 54 58 54 58 58 54 58 58 54 54 58 58 54 58 58 58 58 54 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 54 58 54 53 58 58 54 58 53 54 58 58 50 58 58 58 51 50 58 58 58 58 58 58 58 54 49 58 51 58 58 33 58 50 47 50 58 58 51 52 58 50 58 58 58 58 49 49 25 58 51 53 41 58 46 31 58 58 58 58 46 51 58 37 58 58 50 50 58 46 54 32 58 58 58 58 58 48 40 58 50 32 49 58 44 58 58 58 51 58 51 37 58 39 53 31 46 37 37 54 37 58 51 58 58 39 39 52 50 58 44 39 51 58 50 53 47 37 58 45 52 51 49 51 47 35 40 29 54 54 47 39 39 52 45 53 53 54 53 54 54 54 39 40 42 42 40 49 41 44 44 40 49 47 42 49 44 46 40 54 54 54 40 40 44 47 47 45 37 54 54 54 54 54 54 54 54 42 40 43 34 51 47 45 31 47 42 53 54 54 34 34 40 34 45 53 52 31 32 41 29 52 53 53 52 52 34 33 40 32 34 32 29 32 33 42 32 49 49 40 40 32 49 21 27 29 41 31 36 31 29 33 46 38 33 31 46 30 30 51 46 28 30 31 33 33 33 31 29 51 20 20 42 31 26 45 34 51 35 28 46 46 37 31 27 27 28 46 46 48 31 33 13 46 46 28 26 36 32 30 31 27 30 31 31 48 46 27 29 31 46 41 25 46 46 28 21 31 31 31 27 48 48 36 27 32 31 30 20 36 48 46 33 31 31 42 46 31 31 30 46 36 30 27 30 31 37 33 34 32 37 31 22 26 20 31 25 27 41 25 31 11 31 21 31 29 13 22 26 29 29 30 31 35 32 27 19 14 23 8 16 17 16 24 33 23 22 32 10 44 12 27 21 24 22 20 19 20 24 30 8 16 8 5 5 17 14 23 32 31 29 26 7 32 28 48 22 22 23 15 34 33 28 31 33 21 32 33 33 28 32 13 11 17 19 20 19 31 20 18 11 19 19 16 28 27 20 27 20 28 18 19 21 28 11 21 20 19 18 26 14 18 8 11 12 26 19 27 11 20 16 13 11 13 27 12 18 11 5 7 8 47 15 13 12 18 40 21 9 7 18 6 7 15 3 7 19 16 47 18 16 6 16 15 33 32 9 5 21 11 9 6 20 19 16 8 8 19 7 5 10 15 13 3 3 3 2 20 28 7 3 14 28 18 14 7 20 6 10 11 14 11 4 4 22 11 8 8 5 4 4 5 4 4 7 15 6 16 8 6 10 8 7 6 11 18 10 23 7 8 4 11 7 5 22 6 7 7 9 8 4 9 3 8 17 4 15 3 1 2 2 2 5 5 2 2 5 5 3 6 7 4 2 3 3 8 13 7 7 15 5 3 3 2 3 4 5 4 4 6 17 5 6 4 4 3 5 14	Open. Hide. 62 47 39 44 62 62 62 59 56 62 62 62 37 26 46 49 33 43 59 59 59 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 59 62 62 62 54 62 59 62 62 62 59 62 62 62 59 62 62 49 49 42 62 62 62 62 59 62 62 59 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 59 54 42 54 62 62 62 62 59 62 62 54 54 62 54 42 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 59 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 49 54 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 31 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 49 54 58 58 58 54 58 58 58 58 45 42 58 58 54 54 54 58 58 58 58 58 58 58 58 58 58 58 58 41 58 52 58 54 54 58 58 52 58 58 58 52 58 52 41 49 54 58 58 54 54 58 51 58 43 47 58 52 58 54 58 58 58 58 51 58 58 58 48 58 58 58 51 51 51 58 48 54 58 51 47 58 52 47 58 58 53 58 58 58 41 50 58 58 50 50 54 58 52 40 58 38 33 52 50 58 46 29 58 53 51 40 50 51 58 58 42 35 36 51 54 58 58 58 58 58 48 58 50 54 58 51 51 58 50 35 51 49 58 58 58 50 50 52 53 58 40 58 58 39 58 50 30 39 58 58 32 47 25 43 25 54 58 49 58 51 52 58 53 53 37 37 46 54 49 35 30 49 44 35 54 54 29 40 40 40 37 34 54 54 30 30 51 54 44 44 37 39 35 49 54 42 53 39 40 54 50 37 39 41 54 42 44 17 46 52 33 53 46 32 40 40 42 53 28 32 27 23 54 31 39 49 46 40 41 28 25 38 45 37 45 52 33 29 31 52 51 30 31 53 32 32 46 34 41 22 35 31 45 32 45 32 31 32 45 34 31 31 32 26 33 24 52 40 32 34 32 32 14 51 36 15 28 25 31 28 32 47 32 30 31 31 27 31 34 31 32 31 35 42 45 32 31 23 46 31 34 43 31 31 30 32 25 29 25 22 19 29 22 28 31 28 31 29 32 26 33 31 30 14 30 32 31 30 27 23 48 48 35 27 28 32 27 31 48 27 28 16 34 22 46 37 25 26 28 27 22 32 32 32 32 43 35 29 19 20 31 29 28 37 25 24 38 28 41 19 36 23 32 30 32 31 26 46 46 19 15 26 36 31 15 30 18 16 18 31 32 31 20 30 32 16 33 19 30 26 31 31 31 26 27 23 31 24 32 32 34 24 24 32 34 15 15 30 14 29 23 21 25 47 21 15 23 26 33 20 8 9 4 23 31 24 7 18 12 17 24 10 14 8 33 10 33 33 22 25 32 15 23 48 28 18 32 25 33 36 15 4 4 6 10 21 27 12 34 8 17 47 13 9 11 26 27 27 21 11 7 20 30 15 28 20 17 11 23 19 13 9 13 3 5 5 5 8 8 16 15 13 32 5 14 11 14 30 6 10 23 16 27 23 7 11 6 3 4 21 16 24 13 19 19 9 9 4 6 13 13 6 21 19 16 21 9 16 9 8 8 10 8 23 16 18 25 25 25 28 19 16 7 3 4 13 5 6 10 9 21 21 8 22 10 7 8 5 8 5 3 4 10 4 4 4 7 1 3 11 11 11 6 6 2 3 10 10 10 9 4 15 4 15 8 5 5 6 5 11 5 4 15 16 18 7 7 8 6 8 13 6 12 12 1 2 9 4 5 3 3 1 2 3 5 1 3 3 1 3 1 2 3 2 5 7 5 2 1 1 2 6 11 12 2 3 12 11 9 1 1 2 6 18 14 4 6 4 7 18 2 3 5 4 6 11 6 10 3 1 1 1 3 6

Alignment Information

BAC End 1

BAC End 2

seq1: chr8_76035868_76037071
seq2: B6Ng01-317O12.b_47_1232 (reverse)

seq1  TTTCTTATTGACAGTGTCCTTTGCCTTACAGAAGCTTTGCAATTTTATGA  50
      |||| ||||||||||    | || ||||||| ||| ||||||  ||| | 
seq2  TTTC-TATTGACAGT----TCTG-CTTACAG-AGC-TTGCAA--TTAAGT  40

seq1  GGTCCCATTTGACAATTCTTGATCGTAC--AGCACAAGCCATTGTTGTTC  98
       ||||   | |||||| || ||||||||   ||||||| |||   |||||
seq2  AGTCC--ATGGACAATCCTGGATCGTACCAGGCACAAG-CAT--GTGTTC  85

seq1  TGTTCAGGAATTTTTCCCCGGTGCCCATATCTGAGCTCCCTGGGACTAAA  148
      |||||| |||||||  ||| ||| ||||||||||||||| ||||||||||
seq2  TGTTCA-GAATTTT--CCCCGTG-CCATATCTGAGCTCCTTGGGACTAAA  131

seq1  TCACCACTGAAAGCAAACACATGGAGAGACTCATGGTTCTAGTTGCATAT  198
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TCACCACTGAAAGCAAACACAT-GAGAGACTCATGGTTCTAGTTGCATAT  180

seq1  GTAGCTGAGGATGGCCTAGTCAGTCATCAATGGGAGGAGAGGCCCTTGGT  248
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GTAGCTGAGGATGGCCTAGTCAGTCATCAATGGGAGGAGAGG-CCTTGGT  229

seq1  CCTGTGAA-GGTTCTATGGCCCAATATAGGCGAATGCCTGGGCTAGGAAG  297
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGAAGGGTTCTATGGCCCAATATAGGCGAATGCCTGGGCTAGGAAG  279

seq1  TAGGAGTGGGTGGGCTGGGGTGCATGGGGAGCAGGGGAGGTGGGGAGAGG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGTGGGTGGGCTGGGGTGCATGGGGAGCAGGGGAGGTGGGGAGAGG  329

seq1  ATAGGGGATTTTTGGAGGGGAAATTAGGAAAGAGCATAAAATTTGAAATG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGGGATTTTTGGAGGGGAAATTAGGAAAGAGCATAAAATTTGAAATG  379

seq1  TAGGTAAAGAAAATATCTAATTAAAAAAAGGAAACTGATTTCAGTGAATG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTAAAGAAAATATCTAATTAAAAAAAGGAAACTGATTTCAGTGAATG  429

seq1  ATTTTTTTTTCTTCAGTTTTTAAGGAGTGGTATGTATTTTCAAGTATGTC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTTTCTTCAGTTTTTAAGGAGTGGTATGTATTTTCAAGTATGTC  479

seq1  TTGTCAAGGAAACCTTTCTTTAATTTTCCTTGCCTAAACCAAAAAGGTGG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCAAGGAAACCTTTCTTTAATTTTCCTTGCCTAAACCAAAAAGGTGG  529

seq1  GAAAAAAATCTTAAAACACCAAAATCCTACATCTTTTCGATTTTACTCTC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAATCTTAAAACACCAAAATCCTACATCTTTTCGATTTTACTCTC  579

seq1  AGGAAAGAGGTTGAAATAATTATAGACCACTTCCTTGCTGTAATTATATT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGAGGTTGAAATAATTATAGACCACTTCCTTGCTGTAATTATATT  629

seq1  AATGTCACTCTCTGCTTGGAGTGTCATTTTGCTGGACTTTTTTTTTTTTA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCACTCTCTGCTTGGAGTGTCATTTTGCTGGACTTTTTTTTTTTTA  679

seq1  ATCGAAGATGTTTACATTTCTCTAACACATTTGGTACAAACGAAGCAGCT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGAAGATGTTTACATTTCTCTAACACATTTGGTACAAACGAAGCAGCT  729

seq1  GTTCTGCAGGGAAATGGCACTGACAGTTGCCATGGGAACTGTGTGAAGTC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGCAGGGAAATGGCACTGACAGTTGCCATGGGAACTGTGTGAAGTC  779

seq1  ACAGAAAGTAGATTATCTCATAATACATTACCCAGTGTTAGAAACAGGCA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAAGTAGATTATCTCATAATACATTACCCAGTGTTAGAAACAGGCA  829

seq1  GCTGGACTAAGAACAAACTACCAATTAATGAGCAACAATTCAGGGCCAGA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGACTAAGAACAAACTACCAATTAATGAGCAACAATTCAGGGCCAGA  879

seq1  GAATAGGAGCCATATAGAAGGCTGCCTCTGAAATGTCATGTTTAAGCTAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGGAGCCATATAGAAGGCTGCCTCTGAAATGTCATGTTTAAGCTAA  929

seq1  TTTATTGGTTCCTTTGCTTGATGCAAACCAATTACTCCGATTGCATTCCA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTGGTTCCTTTGCTTGATGCAAACCAATTACTCCGATTGCATTCCA  979

seq1  TCCATATAAATCTTCTCAACCAGCTCTGACTTCTGCAAGAGAAAATCCAG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATATAAATCTTCTCAACCAGCTCTGACTTCTGCAAGAGAAAATCCAG  1029

seq1  AAAAGAACAATTGGACATTTGTGAGAAATACCTAAAATTAGTGTACAAAA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAACAATTGGACATTTGTGAGAAATACCTAAAATTAGTGTACAAAA  1079

seq1  TTCTCTCTGTTCAGTGAAATTGAAATGATTGACTTGATTTTACCTGTGAA  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCTGTTCAGTGAAATTGAAATGATTGACTTGATTTTACCTGTGAA  1129

seq1  AGTCTTCAGCAGGAAATAAACTTCTTGATGAAACGTGGCATGTTTGGGTG  1197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTCAGCAGGAAATAAACTTCTTGATGAAACGTGGCATGTTTGGGTG  1179

seq1  TGAATTC  1204
      |||||||
seq2  TGAATTC  1186

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information