BAC Information

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BAC

Clone NameB6Ng01-318B12
Chromosome8 (Build37)
Map Location 60,353,806 - 60,506,373
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC654355, LOC100040515, Hand2, Scrg1, Sap30, Hmgb2, LOC547012, Galnt7, LOC100040634, LOC100040711
Downstream gene4930431L04Rik, BC030500
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-318B12.bB6Ng01-318B12.g
ACCGA108068GA108069
length1,0451,138
definitionB6Ng01-318B12.b B6Ng01-318B12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,505,346 - 60,506,373)(60,353,806 - 60,354,918)
sequence
gaattccaagtgccactggaaatgaccttattaggggatgtctttataac
ctggctactgggctacgtaacctcctctggtaagcaacggtggatgcaca
gggctatgttcagggacatgaatgaaggccctggatgtgggggaggggga
atcctactcctgatgatctctggctcaaattttcacggtttggaaacacc
tcaacccttctcttccctgcccctgcccccatcccacatctcccctgtaa
cacagatttagatttctttacatgtcaaaatgtgattgtactggctgatt
ttatgtcaattggcacagctagagtcataagaataaggagccccagtgag
gaaatggcttcatgagacccacctgaaagtcattttcttaatcggtggtc
aaggggggaaggcctagcccatggcgggtagtgccatatctgtgctgggt
ggtcccaggttctataagaaggcaggttgatcaagccatgggaagctaac
cagtacacagcgcccctccatggtctctacatcagctccagcctccaggt
ttcggctgtgcgtgagttcctgtcctgtgatccagtgatggactgtgatc
tggaattgtaagctaatgaaccctttcctccccaacttgtattttggtca
tggggttccatagcatccatagaaacagcacaaggaacttctccctgttc
agaggtaaagaggagagagaagaggctgtgtgaaggctgggacaggagga
gaaggagaggttgtgattaggacattaactgaatagataaatttaattta
gtgggggaaaaagaagcctaagataatgatagttgactttagaacttcca
ggggaggagcagaaaataatttagtacctattaagaagggaaaatttgta
tgagataccaactactcgagaaatgaattctttgtcaatgaagtcaatta
ccaggttgtaatgatgatcaccggccttcacccccttcctccacaacact
tacctaggattgtttaagttaaacttttggcactgtatgtaaatc

gaattctaagatggtgtttaaattcccacctcaaggaaagaggtctttgt
ttaatctcctccctttgggtgtgtgatggagttgacacctgtgtgatact
aataaagagagtaaagggggttgtcagaagctctgaattaatcagtaggg
aaattaccctatggaggggagtctgatcctcacaaatgagccatgacttg
gttcttcctaagagaagagacccgatgattttgaagtatgagggaaattt
cactcatggcccagaaacagtatgctggcacgttgagagaggttacagtc
gaagcccctgacaagggcagtgtggcctgcgggagctgagtgtgcttgct
aggtcttacctgttctcagcccatagctgcagattctgtcaccaacttga
ggtaactttccagattttcagcatccaaataaggacagagttggtgggat
ttggctgaaggatacttagcagggaattctgataaagtatacttggactt
ttcttgaaattattcatcttgcttatattaattttatttgcatagaatca
gaatactcttttacagttattcacattctctttatgatcatttttacatt
tgtatcttgccttttcatggtcaattactatacaattattctactgattt
ctatattcatttcttttattaattatttactttcgtctcttgcaccatta
gtttttggttttcaaaattactaagttccttctgtgctttttcatctctg
tccttactttatttgccttatttcatttttaacttggtttgattgtttac
tttttttatttttattctttcattctatggagacataaaacctttctttt
tccttctgaatgttgcattagctgtacccctgtgcccctggaataccacg
ttttaatttcagtctttctcctaaggcgatataattttgttattaatttt
taaacctccttgccttttagtctaattttattcccctttctcagccccca
tcccctccactgccctagatgcttgcagaatacccttgtttccttctatt
gaccctttcaattcagcagaattagctttaatccttgcttcccaattata
tttgcagctgctattgaattccatctggttgttatttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_60505346_60506373
seq2: B6Ng01-318B12.b_45_1089 (reverse)

seq1  GATTTACATAAAGTG-CAAAAG-TTAACTTAAAACAAACCTATGTAAGTG  48
      |||||||||| |||| |||||| ||||||| |||||| |||| |||||||
seq2  GATTTACATACAGTGCCAAAAGTTTAACTT-AAACAATCCTAGGTAAGTG  49

seq1  TTGTGGAGGA--GGGGTG-AGGCC-GTGATCATCA-TACACCCTGGT-AT  92
      ||||||||||  |||||| ||||| |||||||||| |||| |||||| ||
seq2  TTGTGGAGGAAGGGGGTGAAGGCCGGTGATCATCATTACAACCTGGTAAT  99

seq1  TGACTTCATTGACAA--GATTCCTTTCTCGAGTAGTTGGTATCTCATAC-  139
      |||||||||||||||   |||| |||||||||||||||||||||||||| 
seq2  TGACTTCATTGACAAAGAATTCATTTCTCGAGTAGTTGGTATCTCATACA  149

seq1  AATTTTCCCTTCTTAAT-GGTACT-AATTATTTTCTGCT-CTTCCCTGG-  185
      ||||||||||||||||| |||||| |||||||||||||| || |||||| 
seq2  AATTTTCCCTTCTTAATAGGTACTAAATTATTTTCTGCTCCTCCCCTGGA  199

seq1  AGTTCT-AAGTC-ACTATCATTATCTTAGGGCTTCTTTTTCCCCCACTAA  233
      |||||| ||||| ||||||||||||||| |||||||||||||||||||||
seq2  AGTTCTAAAGTCAACTATCATTATCTTA-GGCTTCTTTTTCCCCCACTAA  248

seq1  --TTAATTTATCTATTCAGTTAATGTCCTAATCACAACCTCTCCTTCTCC  281
        | ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATTTATCTATTCAGTTAATGTCCTAATCACAACCTCTCCTTCTCC  298

seq1  TCCTGTCCCAGCCTTCACACAGCCTCTTCTCTCTCCTCTTTACCTCTGAA  331
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTCCCAGCCTTCACACAGCCTCTTCTCTCTCCTCTTTACCTCTGAA  348

seq1  CAGGGAGAAGTTCCTTGTGCTGTTTCTATGGATGCTATGGAACCCCATGA  381
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAGAAGTTCCTTGTGCTGTTTCTATGGATGCTATGGAACCCCATGA  398

seq1  CCAAAATACAAGTTGGGGAGGAAAGGGTTCATTAGCTTACAATTCCAGAT  431
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAATACAAGTTGGGGAGGAAAGGGTTCATTAGCTTACAATTCCAGAT  448

seq1  CACAGTCCATCACTGGATCACAGGACAGGAACTCACGCACAGCCGAAACC  481
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTCCATCACTGGATCACAGGACAGGAACTCACGCACAGCCGAAACC  498

seq1  TGGAGGCTGGAGCTGATGTAGAGACCATGGAGGGGCGCTGTGTACTGGTT  531
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGCTGGAGCTGATGTAGAGACCATGGAGGGGCGCTGTGTACTGGTT  548

seq1  AGCTTCCCATGGCTTGATCAACCTGCCTTCTTATAGAACCTGGGACCACC  581
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCCCATGGCTTGATCAACCTGCCTTCTTATAGAACCTGGGACCACC  598

seq1  CAGCACAGATATGGCACTACCCGCCATGGGCTAGGCCTTCCCCCCTTGAC  631
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACAGATATGGCACTACCCGCCATGGGCTAGGCCTTCCCCCCTTGAC  648

seq1  CACCGATTAAGAAAATGACTTTCAGGTGGGTCTCATGAAGCCATTTCCTC  681
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCGATTAAGAAAATGACTTTCAGGTGGGTCTCATGAAGCCATTTCCTC  698

seq1  ACTGGGGCTCCTTATTCTTATGACTCTAGCTGTGCCAATTGACATAAAAT  731
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGGCTCCTTATTCTTATGACTCTAGCTGTGCCAATTGACATAAAAT  748

seq1  CAGCCAGTACAATCACATTTTGACATGTAAAGAAATCTAAATCTGTGTTA  781
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAGTACAATCACATTTTGACATGTAAAGAAATCTAAATCTGTGTTA  798

seq1  CAGGGGAGATGTGGGATGGGGGCAGGGGCAGGGAAGAGAAGGGTTGAGGT  831
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGAGATGTGGGATGGGGGCAGGGGCAGGGAAGAGAAGGGTTGAGGT  848

seq1  GTTTCCAAACCGTGAAAATTTGAGCCAGAGATCATCAGGAGTAGGATTCC  881
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCAAACCGTGAAAATTTGAGCCAGAGATCATCAGGAGTAGGATTCC  898

seq1  CCCTCCCCCACATCCAGGGCCTTCATTCATGTCCCTGAACATAGCCCTGT  931
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCCCCACATCCAGGGCCTTCATTCATGTCCCTGAACATAGCCCTGT  948

seq1  GCATCCACCGTTGCTTACCAGAGGAGGTTACGTAGCCCAGTAGCCAGGTT  981
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCCACCGTTGCTTACCAGAGGAGGTTACGTAGCCCAGTAGCCAGGTT  998

seq1  ATAAAGACATCCCCTAATAAGGTCATTTCCAGTGGCACTTGGAATTC  1028
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGACATCCCCTAATAAGGTCATTTCCAGTGGCACTTGGAATTC  1045


seq1: chr8_60353806_60354918
seq2: B6Ng01-318B12.g_72_1204

seq1  CTAAGATGGTGTTTAAATTCCCACCTCAAGGAAAGAGGTCTTTGTTTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGATGGTGTTTAAATTCCCACCTCAAGGAAAGAGGTCTTTGTTTAAT  50

seq1  CTCCTCCCTTTGGGTGTGTGATGGAGTTGACACCTGTGTGATACTAATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCCTTTGGGTGTGTGATGGAGTTGACACCTGTGTGATACTAATAA  100

seq1  AGAGAGTAAAGGGGGTTGTCAGAAGCTCTGAATTAATCAGTAGGGAAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGTAAAGGGGGTTGTCAGAAGCTCTGAATTAATCAGTAGGGAAATT  150

seq1  ACCCTATGGAGGGGAGTCTGATCCTCACAAATGAGCCATGACTTGGTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTATGGAGGGGAGTCTGATCCTCACAAATGAGCCATGACTTGGTTCT  200

seq1  TCCTAAGAGAAGAGACCCGATGATTTTGAAGTATGAGGGAAATTTCACTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAAGAGAAGAGACCCGATGATTTTGAAGTATGAGGGAAATTTCACTC  250

seq1  ATGGCCCAGAAACAGTATGCTGGCACGTTGAGAGAGGTTACAGTCGAAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCCAGAAACAGTATGCTGGCACGTTGAGAGAGGTTACAGTCGAAGC  300

seq1  CCCTGACAAGGGCAGTGTGGCCTGCGGGAGCTGAGTGTGCTTGCTAGGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGACAAGGGCAGTGTGGCCTGCGGGAGCTGAGTGTGCTTGCTAGGTC  350

seq1  TTACCTGTTCTCAGCCCATAGCTGCAGATTCTGTCACCAACTTGAGGTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTGTTCTCAGCCCATAGCTGCAGATTCTGTCACCAACTTGAGGTAA  400

seq1  CTTTCCAGATTTTCAGCATCCAAATAAGGACAGAGTTGGTGGGATTTGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCAGATTTTCAGCATCCAAATAAGGACAGAGTTGGTGGGATTTGGC  450

seq1  TGAAGGATACTTAGCAGGGAATTCTGATAAAGTATACTTGGACTTTTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGATACTTAGCAGGGAATTCTGATAAAGTATACTTGGACTTTTCTT  500

seq1  GAAATTATTCATCTTGCTTATATTAATTTTATTTGCATAGAATCAGAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTATTCATCTTGCTTATATTAATTTTATTTGCATAGAATCAGAATA  550

seq1  CTCTTTTACAGTTATTCACATTCTCTTTATGATCATTTTTACATTTGTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTTACAGTTATTCACATTCTCTTTATGATCATTTTTACATTTGTAT  600

seq1  CTTGCCTTTTCATGGTCAATTACTATACAATTATTCTACTGATTTCTATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCTTTTCATGGTCAATTACTATACAATTATTCTACTGATTTCTATA  650

seq1  TTCATTTCTTTTATTAATTATTTACTTTCGTCTCTTGCACCATTAGTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTCTTTTATTAATTATTTACTTTCGTCTCTTGCACCATTAGTTTT  700

seq1  TGGTTTTCAAAATTACTAAGTTCCTTCTGTGCTTTTTCATCTCTGTCCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTCAAAATTACTAAGTTCCTTCTGTGCTTTTTCATCTCTGTCCTT  750

seq1  ACTTTATTTGCCTTATTTCATTTTTAACTTGGTTTGATTGTTTAC-TTTT  799
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ACTTTATTTGCCTTATTTCATTTTTAACTTGGTTTGATTGTTTACTTTTT  800

seq1  TTATTTTTATTCTTTCATTCTATGGAGACATAAA--CCTTCTTTTT-CTT  846
      ||||||||||||||||||||||||||||||||||  | |||||||| |||
seq2  TTATTTTTATTCTTTCATTCTATGGAGACATAAAACCTTTCTTTTTCCTT  850

seq1  CTGAATGTTGCATTAGCTGTACCCCTGTG-CCCTGGAATACCACGTTTTA  895
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CTGAATGTTGCATTAGCTGTACCCCTGTGCCCCTGGAATACCACGTTTTA  900

seq1  ATTTCAGTCTTTCTCCTAAGGCGATATAATTTTGTTATTAATTTTTAAAC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAGTCTTTCTCCTAAGGCGATATAATTTTGTTATTAATTTTTAAAC  950

seq1  CTCTTTG-CTTTTAGTCTAATTTTATT-CCCTTTCTCAG-CCCCATCCC-  991
      ||| ||| ||||||||||||||||||| ||||||||||| ||||||||| 
seq2  CTCCTTGCCTTTTAGTCTAATTTTATTCCCCTTTCTCAGCCCCCATCCCC  1000

seq1  -TCACTG-CCTAGATGCTTGCAGAATA-CCTTGTTT-CTTCTAATGACC-  1036
        ||||| ||||||||||||||||||| |||||||| |||||| ||||| 
seq2  TCCACTGCCCTAGATGCTTGCAGAATACCCTTGTTTCCTTCTATTGACCC  1050

seq1  -TTCATTTCAGCAGGAGTAGGCTTTATTCTTGTGTTCC-ATTATA-TTGC  1083
       |||| |||||||| | |||  || || ||||  | || |||||| ||||
seq2  TTTCAATTCAGCAGAATTAGCTTTAATCCTTGCTTCCCAATTATATTTGC  1100

seq1  AGCTGCTATTG--TTCCTTCT-GTTGTTATTTT  1113
      |||||||||||  |||| ||| |||||||||||
seq2  AGCTGCTATTGAATTCCATCTGGTTGTTATTTT  1133


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