BAC Information

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BAC

Clone NameB6Ng01-318E12
Chromosome8 (Build37)
Map Location 10,576,467 - 10,679,715
singlet/doubletdoublet
Overlap geneMyo16
Upstream geneTmem28, Lig4, Abhd13, Tnfsf13b
Downstream geneLOC100040008, LOC384782, LOC100040507, LOC665306, Irs2, Col4a1, Col4a2, Rab20, 0710008K08Rik, Cars2, Ing1, Ankrd10, 1700016D06Rik, EG665271
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-318E12.bB6Ng01-318E12.g
ACCGA108212GA108213
length1,099991
definitionB6Ng01-318E12.b B6Ng01-318E12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(10,678,606 - 10,679,715)(10,576,467 - 10,577,439)
sequence
gaattctctggttgagggctggaaagatggctccacagttaagatcactg
gatgatcttccagatgactcctttcgattcctagcacccgtataaacgga
tgtgtagataacactcatcgtagtctataaattccagttccaggaaattg
attgccctcttctgtccttcacgggtagaaggcatgcacgtgatgcacag
acatacatgcagaaaagaaacccactcacataaataaaaataaaaataaa
gaataattgttctgtttcaatcaagccattccatcacctcccaacaggaa
gttttgagttgctgatttcaacaaagaaagaaggtctgcgaatggactga
ttcggagaaaagttctggtattttagattccccagacttcattatgcaga
gagcacgtcacagtgtttctgttccagttttgatgctatgcaacacagcc
tactcagttgataaacattagctcatgtcaaaatgtttcccttagatctt
gcaagttttcaagaagccattgtcaacccacaggcatgcatgctgtttcc
cctttccagctctttgcccttttgtgtcacctgtgtctgtagctgaggat
ggttggaattgcaggtttgctatagatgactgcagggttagggaccaggc
tggtcccaaaggaccccaacaagagaatacttctattcctggtaacaaaa
gcaactgttatttccagtgtgcatgacaagaattcaataacccaggtgag
ttgaaataagggaggttgtccttatgtccatatgtccatcctggacattt
gctacaagagatgctgagctaacagctcgccaacacagtctctctcttct
ctctctctccctcccttcctccctccctgactccctccctccctctctcc
atcaccccctctccctgtttcctattcaggatcacttactaatcaaataa
tttaacgcagaatttgaggaaaaagttgggaggatatgataataattaag
tctgagtttagagatgatttgggttgggaacatttttgatagtgagttca
tttaccatcgtgctttttttccccataagacaacaccatttttgaacgc
gaattccattacagtcactcagtaactcagactgtaagcacagggcttgc
tactgaaaatccaaaacaataaatgactaaatcttccgttgcctgcctcc
tcccaggctgtgtgggattcccacttcagagagaaaaaagcagaggaata
aacctctaatgtgagggggatccatggctgggctcaaagtgtccccagac
ccttgagttcctcacatgcaccttgtttggagacggggagggggacttca
aaaaaatgttatctgattgtcacacaatagcagtaacctgggagagatga
tgacaaagaggcaaagatgtgcctccaaagtacatttccagccaggatgc
atgcagagcaggggttgtccctgtgactttcaggagtgctgggccagccc
tgactgacaagaagaaaggaaaaaggaaagaaagggatggtggtggttgg
gtttattttgatgcagaggcattacccggaatcctcatagaaaatacaca
gtgtaaggtgtgtaggctcaggatcctttctgaacatagctttggatgca
aggaaagaaaggagggaggacaggagacagccctcactgctcaggcccag
cgtgatgtcaggcttctctctagaagctactttctgctttcctggtaagc
cctggtgcttccttgtctcccctccatcctttagacgttagcatggccat
cagaatctcccccacaacaaagtacaaagctccacaagaggagagagaac
caatgtggtgggggctgctgtgctgctacgggcagaccctcacattagta
ggagcacccagacacactgtgttgccctgtgatggcatttgtcccctaag
catagctgctggaggtttacctgtaactctctctcttgaccagggtgcct
gaggagcaagctgaaggctttcagctattagtagctccttacttccataa
tcaatggaaatactaacatctttagaagtcagggagtcaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_10678606_10679715
seq2: B6Ng01-318E12.b_45_1143 (reverse)

seq1  GCGTTTAAAAAATGGGTTGTTTGTCTATGGGGAAAAAAAAGCACGATGGT  50
      ||||| |||||  | ||||| |   ||||||| |||||||||||||||| 
seq2  GCGTTCAAAAATGGTGTTGTCT---TATGGGG-AAAAAAAGCACGATGG-  45

seq1  TAAATGAAACTCACTATTCAAAAATGTTCCCAACCCAAATCATCCTTCTA  100
      |||||| ||||||||| |||||||||||||||||||||||||||  ||| 
seq2  TAAATG-AACTCACTA-TCAAAAATGTTCCCAACCCAAATCATC--TCT-  90

seq1  AAACTCAGACTTAATTATTATCATATCCT-CCAACTTTTTCCCTCAAATT  149
      ||||||||||||||||||||||||||||| |||||||||| |||||||||
seq2  AAACTCAGACTTAATTATTATCATATCCTCCCAACTTTTT-CCTCAAATT  139

seq1  CTGCGTTAAATTATTTGATTAGTAAGTTGATCCTGAATAGGAAACAGGGA  199
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CTGCGTTAAATTATTTGATTAGTAAG-TGATCCTGAATAGGAAACAGGGA  188

seq1  GAGGGGGTGATGGAGAGAGGGAGGGAGGGAGTCAGGGAGGGAGGAAGGGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGGTGATGGAGAGAGGGAGGGAGGGAGTCAGGGAGGGAGGAAGGGA  238

seq1  GGGAGAGAGAGAGAAGAGAGAGACTGTGTTGGCGAGCTGTTAGCTCAGCA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAGAGAGAGAAGAGAGAGACTGTGTTGGCGAGCTGTTAGCTCAGCA  288

seq1  TCTCTTGTAGCAAATGTCCAGGATGGACATATGGACATAAGGACAACCTC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTGTAGCAAATGTCCAGGATGGACATATGGACATAAGGACAACCTC  338

seq1  CCTTATTTCAACTCACCTGGGTTATTGAATTCTTGTCATGCACACTGGAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATTTCAACTCACCTGGGTTATTGAATTCTTGTCATGCACACTGGAA  388

seq1  ATAACAGTTGCTTTTGTTACCAGGAATAGAAGTATTCTCTTGTTGGGGTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACAGTTGCTTTTGTTACCAGGAATAGAAGTATTCTCTTGTTGGGGTC  438

seq1  CTTTGGGACCAGCCTGGTCCCTAACCCTGCAGTCATCTATAGCAAACCTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGGACCAGCCTGGTCCCTAACCCTGCAGTCATCTATAGCAAACCTG  488

seq1  CAATTCCAACCATCCTCAGCTACAGACACAGGTGACACAAAAGGGCAAAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCCAACCATCCTCAGCTACAGACACAGGTGACACAAAAGGGCAAAG  538

seq1  AGCTGGAAAGGGGAAACAGCATGCATGCCTGTGGGTTGACAATGGCTTCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGAAAGGGGAAACAGCATGCATGCCTGTGGGTTGACAATGGCTTCT  588

seq1  TGAAAACTTGCAAGATCTAAGGGAAACATTTTGACATGAGCTAATGTTTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAACTTGCAAGATCTAAGGGAAACATTTTGACATGAGCTAATGTTTA  638

seq1  TCAACTGAGTAGGCTGTGTTGCATAGCATCAAAACTGGAACAGAAACACT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTGAGTAGGCTGTGTTGCATAGCATCAAAACTGGAACAGAAACACT  688

seq1  GTGACGTGCTCTCTGCATAATGAAGTCTGGGGAATCTAAAATACCAGAAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACGTGCTCTCTGCATAATGAAGTCTGGGGAATCTAAAATACCAGAAC  738

seq1  TTTTCTCCGAATCAGTCCATTCGCAGACCTTCTTTCTTTGTTGAAATCAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCCGAATCAGTCCATTCGCAGACCTTCTTTCTTTGTTGAAATCAG  788

seq1  CAACTCAAAACTTCCTGTTGGGAGGTGATGGAATGGCTTGATTGAAACAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCAAAACTTCCTGTTGGGAGGTGATGGAATGGCTTGATTGAAACAG  838

seq1  AACAATTATTCTTTATTTTTATTTTTATTTATGTGAGTGGGTTTCTTTTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATTATTCTTTATTTTTATTTTTATTTATGTGAGTGGGTTTCTTTTC  888

seq1  TGCATGTATGTCTGTGCATCACGTGCATGCCTTCTACCCGTGAAGGACAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGTATGTCTGTGCATCACGTGCATGCCTTCTACCCGTGAAGGACAG  938

seq1  AAGAGGGCAATCAATTTCCTGGAACTGGAATTTATAGACTACGATGAGTG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGGCAATCAATTTCCTGGAACTGGAATTTATAGACTACGATGAGTG  988

seq1  TTATCTACACATCCGTTTATACGGGTGCTAGGAATCGAAAGGAGTCATCT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTACACATCCGTTTATACGGGTGCTAGGAATCGAAAGGAGTCATCT  1038

seq1  GGAAGATCATCCAGTGATCTTAACTGTGGAGCCATCTTTCCAGCCCTCAA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGATCATCCAGTGATCTTAACTGTGGAGCCATCTTTCCAGCCCTCAA  1088

seq1  CCAGAGAATTC  1110
      |||||||||||
seq2  CCAGAGAATTC  1099

seq1: chr8_10576467_10577439
seq2: B6Ng01-318E12.g_62_1051

seq1  GAATTCCATTACAGTCACTCAGTAACTCAGACTGTAAGCACAGGGCTTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTACAGTCACTCAGTAACTCAGACTGTAAGCACAGGGCTTGC  50

seq1  TACTGAAAATCCAAAACAATAAATGACTAAATCTTCCGTTGCCTGCCTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAAAATCCAAAACAATAAATGACTAAATCTTCCGTTGCCTGCCTCC  100

seq1  TCCCAGGCTGTGTGGGATTCCCACTTCAGAGAGAAAAAAGCAGAGGAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGGCTGTGTGGGATTCCCACTTCAGAGAGAAAAAAGCAGAGGAATA  150

seq1  AACCTCTAATGTGAGGGGGATCCATGGCTGGGCTCAAAGTGTCCCCAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCTAATGTGAGGGGGATCCATGGCTGGGCTCAAAGTGTCCCCAGAC  200

seq1  CCTTGAGTTCCTCACATGCACCTTGTTTGGAGACGGGGAGGGGGACTTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGAGTTCCTCACATGCACCTTGTTTGGAGACGGGGAGGGGGACTTCA  250

seq1  AAAAAATGTTATCTGATTGTCACACAATAGCAGTAACCTGGGAGAGATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATGTTATCTGATTGTCACACAATAGCAGTAACCTGGGAGAGATGA  300

seq1  TGACAAAGAGGCAAAGATGTGCCTCCAAAGTACATTTCCAGCCAGGATGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAAGAGGCAAAGATGTGCCTCCAAAGTACATTTCCAGCCAGGATGC  350

seq1  ATGCAGAGCAGGGGTTGTCCCTGTGACTTTCAGGAGTGCTGGGCCAGCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGAGCAGGGGTTGTCCCTGTGACTTTCAGGAGTGCTGGGCCAGCCC  400

seq1  TGACTGACAAGAAGAAAGGAAAAAGGAAAGAAAGGGATGGTGGTGGTTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGACAAGAAGAAAGGAAAAAGGAAAGAAAGGGATGGTGGTGGTTGG  450

seq1  GTTTATTTTGATGCAGAGGCATTACCCGGAATCCTCATAGAAAATACACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTTTGATGCAGAGGCATTACCCGGAATCCTCATAGAAAATACACA  500

seq1  GTGTAAGGTGTGTAGGCTCAGGATCCTTTCTGAACATAGCTTTGGATGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAAGGTGTGTAGGCTCAGGATCCTTTCTGAACATAGCTTTGGATGCA  550

seq1  AGGAAAGAAAGGAGGGAGGACAGGAGACAGCCCTCACTGCTCAGGCCCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGAAAGGAGGGAGGACAGGAGACAGCCCTCACTGCTCAGGCCCAG  600

seq1  CGTGATGTCAGGCTTCTCTCTAGAAGCTACTTTCTGCTTTCCTGGTAAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGATGTCAGGCTTCTCTCTAGAAGCTACTTTCTGCTTTCCTGGTAAGC  650

seq1  CCTGGTGCTTCCTTGTCTCCCCTCCATCC-TTAGACGTTAGCATGGCCAT  699
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CCTGGTGCTTCCTTGTCTCCCCTCCATCCTTTAGACGTTAGCATGGCCAT  700

seq1  CAGAATCTCCCCCACAACAAAGTACAAAGCTCCACAAGAGGAGAGAGAAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATCTCCCCCACAACAAAGTACAAAGCTCCACAAGAGGAGAGAGAAC  750

seq1  CAATGTGGTGGGGGCTGCTGTGCTGCTACGGGCAGACCCTCACA-TAGTA  798
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CAATGTGGTGGGGGCTGCTGTGCTGCTACGGGCAGACCCTCACATTAGTA  800

seq1  GGAGCACCCAGACACACTGTG-TGCCCTGTGATGGCATTTGT-CCCTAAG  846
      ||||||||||||||||||||| |||||||||||||||||||| |||||||
seq2  GGAGCACCCAGACACACTGTGTTGCCCTGTGATGGCATTTGTCCCCTAAG  850

seq1  CATAGCTGCT-GAAGTTTACCTGTAGCTCTCTC-CTTGACCAGGGTG-CT  893
      |||||||||| || ||||||||||| ||||||| ||||||||||||| ||
seq2  CATAGCTGCTGGAGGTTTACCTGTAACTCTCTCTCTTGACCAGGGTGCCT  900

seq1  GAGGAGCAAGCTG-AGGCTTTCAGC-ATTAAGAGCT-CTTAC-TCCATAA  939
      ||||||||||||| ||||||||||| ||||  |||| ||||| |||||||
seq2  GAGGAGCAAGCTGAAGGCTTTCAGCTATTAGTAGCTCCTTACTTCCATAA  950

seq1  TCA--TGAAAT-CTAACATC-TTAG-AGTCA-GGAGTCAA  973
      |||   ||||| |||||||| |||| ||||| ||||||||
seq2  TCAATGGAAATACTAACATCTTTAGAAGTCAGGGAGTCAA  990