BAC Information

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BAC

Clone NameB6Ng01-319A13
Chromosome8 (Build37)
Map Location 67,643,365 - 67,644,417
singlet/doubletsinglet
Overlap genenone
Upstream geneTll1, LOC100040989, Cpe, Sc4mol, Klhl2, LOC100040903, LOC619647, 3110005G23Rik, Trim75, Trim60, LOC665388
Downstream geneLOC665396, LOC100040949, LOC665405, Vaultrc-ps1, LOC100040967, March1, LOC100040986
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-319A13.bB6Ng01-319A13.g
ACCGA108769GA108770
length1,1561,046
definitionB6Ng01-319A13.b B6Ng01-319A13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactggtcttaccacattccccatcatcctgaagcagctggtctg
atagaaagatggaatggccttttgaagacgcagttacagcgccaattagg
tggtaacagcttggaaggctggggcagagttcttcagaaggcagtatatg
ctttgaatcagcgctcgatatatggtacagtttcacccatagccaggatt
catgggtccaggaatcaaggggtggaaaatggaatagttccacttactat
cactcctagtgaccctctaggaaaatttttgcttcctgtccccataactc
taggttctgctggcctagaagttttggctccagagaggggagtactccta
ccaggagctacaacaaacattccattgaactggaagctcagacttccccc
tggtcattttgggcttctaatgcccttaaaccaacaggctaaaaaaggaa
taacagttttaggaggggtgatagatccagattaccatggggaaattgga
ttacctcttcacaatggtggtaagcaagattatgtctggagtgtaggaga
tcccttagggcgtctcttagtactaccatgtcctgtgattaaagtcaatg
ggaaactacaacagcctaatccaagcaggatgacaaaggatgcagaccca
tcaggaatgaaggtatgggttaatcctccaggaaaagagccaagacctgc
tgaggtgctggctgaaggtgaaggaaatacagaatgggtagtagaggaag
gtagttataaataccaattaaagccacgtaaccagttgcagaaacgagga
ttataaagtaatatgaatgcccattgtaaatttactaatgcgtttgcgat
tgtacgagggatagttatatcatgttaggcgtatttacacccttgttatt
gtttcatgtgaacatgagatattatttgtgtcaagttgacaacgggtgga
ttgtagtggcttattcctggtgtcaacttgacatatttggaatgaactac
aatccggaattggagctcacagtgaccttatctggagctgagatctatct
ggatcttggttggagattcttgaagcatattgctaatgattcagaagatt
gaatctctgggtcagaccaccgtaatctggctacgcccttcactctggga
atatag
gaattcaagtcaatcctggacttggttttatagtaggctcagagccagcc
tgagctatataacaaactgtctcaagaatgtaataaaaataaacacacac
acacacacaccaagggataaattcatagagcgaaaagaaaatgttaaaat
agaccaaatacaaattgagactaaatttaaaagaatcacttaaaatgcaa
atctgcaattcttggcaggcactggaagataaatgaatgtcaatgactat
gtttattgagacctaacaaatgtaggtgccattccacatgtctcatttca
tatgaccctccctagaactctaaaagctgactttctaaacttcctgagta
aacaggcccactaataacagtgtatggtgctcctatagaacagagaatct
tattccaggcaacgtttttagcataacaaaagtgaaggcaaaaaaggctt
gctcagtaagcatgtgggtgtatatgtataggaaagcatcaacaaggtcc
cttaaatatgtacaacttttatatgtaattatacttcaatagagccaaaa
agaattttgtgggtagtataaatctcaaaaaaaaaaaaaaaaaaaaaaaa
aaaaaaaaggatctgaagctatgggataattaaagaataatacagaaagg
cattacatgggtaggataggtagctttcggcctggagatatgaaattaag
tggatgtgaaaactctgggtgatggtgacacctgcctttaatcccagcac
tcaggaggcagtgggggaggggtcatatctctgagtttgaggccaggcac
ttctacagagcaagtcccaagacagccagggctacacagggaaaaattac
aaaaataaaaacaaacaaaaaaagatactagggattagagagtggcttgg
caattaaaagcatattgcttttatagaggactcaagtttgattcccataa
ctcatgcggtaactctcagggatcgacactctggctacaagactggaaca
tacccacatgtacattgccataatatacatacatcatagttagcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_67643365_67644417
seq2: B6Ng01-319A13.g_70_1115 (reverse)

seq1  ATGCTAACTATGATGTATGTATATTTATGCATGTTACATGTGGGTATGTT  50
      |||||||||||||||||||||||||   |||   ||||||||||||||||
seq2  ATGCTAACTATGATGTATGTATATTATGGCAATGTACATGTGGGTATGTT  50

seq1  CAGGTCCTGGTTAAGCCAGAGTGTCGAATCCCTGAGGAGTTACCGGCATG  100
      |  ||| ||    ||||||||||||| |||||||| |||||||| |||||
seq2  CCAGTCTTG---TAGCCAGAGTGTCG-ATCCCTGA-GAGTTACC-GCATG  94

seq1  AGTTATGGGAATCAAACTTGAGTCCTCTATAAAAGCAATATGCTTTTAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATGGGAATCAAACTTGAGTCCTCTATAAAAGCAATATGCTTTTAAT  144

seq1  TGCCAAGCCAACTCTCTAATCCCTAGTATCTTTTTTTGTTTGTTTTTATT  200
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAAGCC-ACTCTCTAATCCCTAGTATCTTTTTTTGTTTGTTTTTATT  193

seq1  TTTGTAATTTTTCCCTGTGTAGCCCTGGCTGTCTTGGGACTTGCTCTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAATTTTTCCCTGTGTAGCCCTGGCTGTCTTGGGACTTGCTCTGTA  243

seq1  GAAGTGCCTGGCCTCAAACTCAGAGATATGACCCCT-CCCCACTGCCTCC  299
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GAAGTGCCTGGCCTCAAACTCAGAGATATGACCCCTCCCCCACTGCCTCC  293

seq1  TGAGTGCTGGGATTAAAGGCAGGTGTCACCATCACCCAGAGTTTTCACAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGCTGGGATTAAAGGCAGGTGTCACCATCACCCAGAGTTTTCACAT  343

seq1  CCACTTAATTTCATATCTCCAGGCCGAAAGCTACCTATCCTACCCATGTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTAATTTCATATCTCCAGGCCGAAAGCTACCTATCCTACCCATGTA  393

seq1  ATGCCTTTCTGTATTATTCTTTAATTATCCCATAGCTTCAGATCTTTTTT  449
      ||||||||||||||||||||||||||||||||||||||||||||  ||||
seq2  ATGCCTTTCTGTATTATTCTTTAATTATCCCATAGCTTCAGATC-CTTTT  442

seq1  TTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATTTATACTACCCACAAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATTTATACTACCCACAAAA  492

seq1  TTCTTTTTGGCTCTATTGAAGTATAATTACATATAAAAGTTGTACATATT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTGGCTCTATTGAAGTATAATTACATATAAAAGTTGTACATATT  542

seq1  TAAGGGACCTTGTTGATGCTTTCCTATACATATACACCCACATGCTTACT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGGACCTTGTTGATGCTTTCCTATACATATACACCCACATGCTTACT  592

seq1  GAGCAAGCCTTTTTTGCCTTCACTTTTGTTATGCTAAAAACGTTGCCTGG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAAGCCTTTTTTGCCTTCACTTTTGTTATGCTAAAAACGTTGCCTGG  642

seq1  AATAAGATTCTCTGTTCTATAGGAGCACCATACACTGTTATTAGTGGGCC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGATTCTCTGTTCTATAGGAGCACCATACACTGTTATTAGTGGGCC  692

seq1  TGTTTACTCAGGAAGTTTAGAAAGTCAGCTTTTAGAGTTCTAGGGAGGGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTACTCAGGAAGTTTAGAAAGTCAGCTTTTAGAGTTCTAGGGAGGGT  742

seq1  CATATGAAATGAGACATGTGGAATGGCACCTACATTTGTTAGGTCTCAAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGAAATGAGACATGTGGAATGGCACCTACATTTGTTAGGTCTCAAT  792

seq1  AAACATAGTCATTGACATTCATTTATCTTCCAGTGCCTGCCAAGAATTGC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATAGTCATTGACATTCATTTATCTTCCAGTGCCTGCCAAGAATTGC  842

seq1  AGATTTGCATTTTAAGTGATTCTTTTAAATTTAGTCTCAATTTGTATTTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTGCATTTTAAGTGATTCTTTTAAATTTAGTCTCAATTTGTATTTG  892

seq1  GTCTATTTTAACATTTTCTTTTCGCTCTATGAATTTATCCCTTGGTGTGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATTTTAACATTTTCTTTTCGCTCTATGAATTTATCCCTTGGTGTGT  942

seq1  GTGTGTGTGTGTTTATTTTTATTACATTCTTGAGACAGTTTGTTATATAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTTTATTTTTATTACATTCTTGAGACAGTTTGTTATATAG  992

seq1  CTCAGGCTGGCTCTGAGCCTACTATAAAACCAAGTCCAGGATTGACTTGA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGCTGGCTCTGAGCCTACTATAAAACCAAGTCCAGGATTGACTTGA  1042

seq1  ATTC  1053
      ||||
seq2  ATTC  1046