BAC Information

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BAC

Clone NameB6Ng01-319G13
Chromosome8 (Build37)
Map Location 70,072,184 - 70,073,287
singlet/doubletsinglet
Overlap geneNat3
Upstream geneNpy5r, Npy1r, BC053440, LOC665453, Nat1, Nat2, LOC100041265
Downstream genePsd3, Sh2d4a, LOC665510, 4732435N03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-319G13.bB6Ng01-319G13.g
ACCGA109047GA109048
length1551,116
definitionB6Ng01-319G13.b B6Ng01-319G13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tcccacattgttatgagtactgtgtggttttttcctttaattaattttgt
tttttacttattcactttacatcccgccccttgcctgctcctagtcaccc
actccctcaatccttccccctcctcttctcctctgggagattggggatag
ggtgg
gaattcacttggagacaaagcttgtgcccaaatgtggcaatgtctttttt
actatttagagtaataaggggaaatgatctttaatgtttctatatgcact
tattctttcatgaaaaacaatcaaattatgcaaaattaggtgacagactg
agaagccttgagatatcatcacaaagttcatcaatgattgactggtatat
caacatctgtcccctacattatggtaagaaaatcatagacatcaaatagc
tctttctgcaaaattaaccatttatgtaactaaatgacttttgaagaaat
gtgccattaaaaatgtaatcgcaataaaagtgctttaatgatgatatagt
tgtcttgatttatactataaaaccctccatgttgactcattgctggattc
actcaaagggtttaatggtggttgggtaaagtgtacagtgctgattttat
gttcacctagccaagattcacattcatttttacaaaatgcccttctatga
cataaggcagaaatagggaagaataagatataatgttggttataagtaat
tctgaaaataagaatgataccagtggaaagtactgagagatggaaagcca
tgaacttagcacagctggtcaattcttccagaatggctttggcattttca
tttctgtattcatgatgttcctcaaattgttagcattcatatttagaata
ttctacttccattaaatagttcacatataaagtagtaattatacactata
gaatacatatcagatggaaaacacagcacaagagaatactgttgactact
acaataagaatcagaggttttttttaaaggagtatctttattttgagcct
aggtgacttttctacacttttgtattctttgagtgtactgtcttatctaa
aaatcagattcttgcagtttctttccactcaatgtaataagaaataaaaa
attttcttagagacattgtgtcttttccctagttttgaatcatgattcca
tttgtcattttcctcagaatcatatttaataaaatgatagtgtgagacat
cccagatcaagcaacatcccttaacaggtatttttggctggtgaatttcc
agtgtccaggctatag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_70072184_70073287
seq2: B6Ng01-319G13.g_66_1181

seq1  GAATTCACTTGGAGACAAAGCTTGTGCCCAAATGTGGCAATGTCTTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTGGAGACAAAGCTTGTGCCCAAATGTGGCAATGTCTTTTTT  50

seq1  ACTATTTAGAGTAATAAGGGGAAATGATCTTTAATGTTTCTATATGCACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTTAGAGTAATAAGGGGAAATGATCTTTAATGTTTCTATATGCACT  100

seq1  TATTCTTTCATGAAAAACAATCAAATTATGCAAAATTAGGTGACAGACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTTTCATGAAAAACAATCAAATTATGCAAAATTAGGTGACAGACTG  150

seq1  AGAAGCCTTGAGATATCATCACAAAGTTCATCAATGATTGACTGGTATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCCTTGAGATATCATCACAAAGTTCATCAATGATTGACTGGTATAT  200

seq1  CAACATCTGTCCCCTACATTATGGTAAGAAAATCATAGACATCAAATAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATCTGTCCCCTACATTATGGTAAGAAAATCATAGACATCAAATAGC  250

seq1  TCTTTCTGCAAAATTAACCATTTATGTAACTAAATGACTTTTGAAGAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTGCAAAATTAACCATTTATGTAACTAAATGACTTTTGAAGAAAT  300

seq1  GTGCCATTAAAAATGTAATCGCAATAAAAGTGCTTTAATGATGATATAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCATTAAAAATGTAATCGCAATAAAAGTGCTTTAATGATGATATAGT  350

seq1  TGTCTTGATTTATACTATAAAACCCTCCATGTTGACTCATTGCTGGATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTGATTTATACTATAAAACCCTCCATGTTGACTCATTGCTGGATTC  400

seq1  ACTCAAAGGGTTTAATGGTGGTTGGGTAAAGTGTACAGTGCTGATTTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAAGGGTTTAATGGTGGTTGGGTAAAGTGTACAGTGCTGATTTTAT  450

seq1  GTTCACCTAGCCAAGATTCACATTCATTTTTACAAAATGCCCTTCTATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCACCTAGCCAAGATTCACATTCATTTTTACAAAATGCCCTTCTATGA  500

seq1  CATAAGGCAGAAATAGGGAAGAATAAGATATAATGTTGGTTATAAGTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGGCAGAAATAGGGAAGAATAAGATATAATGTTGGTTATAAGTAAT  550

seq1  TCTGAAAATAAGAATGATACCAGTGGAAAGTACTGAGAGATGGAAAGCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAAATAAGAATGATACCAGTGGAAAGTACTGAGAGATGGAAAGCCA  600

seq1  TGAACTTAGCACAGCTGGTCAATTCTTCCAGAATGGCTTTGGCATTTTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTTAGCACAGCTGGTCAATTCTTCCAGAATGGCTTTGGCATTTTCA  650

seq1  TTTCTGTATTCATGATGTTCCTCAAATTGTTAGCATTCATATTTAGAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTATTCATGATGTTCCTCAAATTGTTAGCATTCATATTTAGAATA  700

seq1  TTCTACTTCCATTAAATAGTTCACATATAAAGTAGTAATTATACACTATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACTTCCATTAAATAGTTCACATATAAAGTAGTAATTATACACTATA  750

seq1  GAATACATATCAGATGGAAAACACAGCACAAGAGAATACTGTTGACTACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACATATCAGATGGAAAACACAGCACAAGAGAATACTGTTGACTACT  800

seq1  ACAATAAGAATCAGAGGTTTTTTTTAAAGGAGTATCTTTATTTTGAGCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATAAGAATCAGAGGTTTTTTTTAAAGGAGTATCTTTATTTTGAGCCT  850

seq1  AGGTGACTTTTCTACACTTTTGTATTCTTTGAGTGTACTGTCTTATCTAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGACTTTTCTACACTTTTGTATTCTTTGAGTGTACTGTCTTATCTAA  900

seq1  AAATCAGATTCTTGCAGTTTC-TTCCACTCAATGTAATAAGAAATAAAAA  949
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AAATCAGATTCTTGCAGTTTCTTTCCACTCAATGTAATAAGAAATAAAAA  950

seq1  --TTTCTTAGAGACATTGTGTCTTT--CCTAGTTTGAAATCATGATTCCA  995
        |||||||||||||||||||||||  ||||||||  |||||||||||||
seq2  ATTTTCTTAGAGACATTGTGTCTTTTCCCTAGTTTTGAATCATGATTCCA  1000

seq1  -TTGTCATTT--CTCAGAATCATATTTAATTAAATGATAGTGTGAGACAT  1042
       |||||||||  |||||||||||||||||| |||||||||||||||||||
seq2  TTTGTCATTTTCCTCAGAATCATATTTAATAAAATGATAGTGTGAGACAT  1050

seq1  CCAAGATCAAGCAACATCCC-TAACAGGTA-TTTTGGCTTGTGAATT--C  1088
      || ||||||||||||||||| ||||||||| |||||||| |||||||  |
seq2  CCCAGATCAAGCAACATCCCTTAACAGGTATTTTTGGCTGGTGAATTTCC  1100

seq1  AATGTCAGGGCTATAG  1104
      | ||||  ||||||||
seq2  AGTGTCCAGGCTATAG  1116