BAC Information

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BAC

Clone NameB6Ng01-319I22
Chromosome8 (Build37)
Map Location 94,985,882 - 94,987,010
singlet/doubletsinglet
Overlap genenone
Upstream geneAJ237917, LOC100041254, LOC674324, LOC100040628, Irx3, 4933436C20Rik, Irx5
Downstream geneIrx6, LOC100041325, Mmp2, Aytl1, Capns2, LOC100040752, Slc6a2, EG244595, LOC382044, Es1, LOC676523, Ces3, Es22, AU018778, Ces1, 2310039D24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-319I22.bB6Ng01-319I22.g
ACCGA109155GA109156
length8021,109
definitionB6Ng01-319I22.b B6Ng01-319I22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgaaacatgagtctataatatgatgcactgatgatgctcctt
gacaggtgcccaaagaactcaacactctgctccacagatacctgctcagc
catgttcattgctacttcagtcacaatggctagaaaatggagtcaaccta
agcatccttcaactggggaatctataatgagattgtggtacatggatgct
atgtaacactactcattggtcaagaaaaacgaaatcataaagtttgtagg
cacgtggatggacatagaagagatcatgttgagtgaggtcgtgctaaacc
agaaagacaaatgctgcatgctctctcacatctcatcatttggaggctcc
tagttccaaatcttcagatagctacatcctgtagtaactatagaaacaag
aaaacgaaaaggagaccattgccggggttgaggtgggggagtgagcagcg
atagagaggacagtagcagggataagagacttgacgtgagaaatgggaaa
gcaggggagatgttaaatgggaaggaggagagagagagaaatacagactc
aggaggagagtaaactaatagtatagctgcctaaagtcataggagctatt
tacctaaaataccttgtctgtgtataaatatacatatatagtttaaatga
ttttttttcttatctgggattgcaatgtactctcaaagagcaaaagaccc
cctcctaataaaaaaactcaacactagggcatgaggagccatctttggag
tttgttaagccagggctgtccccagagattttcaatacatttaatctatt
gt
gaattctggtccatgaatgccccctcttggagagaggagactcagatcac
tgcccctccaccccatccatggctatagaagaggtagatagttggggtgg
gctcttcagtatgtggctgatgtaagtggctggatgtaaactgaggaatt
ttgctgtggcacagctgcccttgagtctccgctgctcctcctgtaaatga
tcccaacaaacccattgtttcaccaagctggacctccataaaatcttttc
tttggtctgttggtgtcccacctaaagtgggtgaatagactcctttatgg
ctcccagcaagtcaccagacacacaccttcctgtgtggccagctctgtct
tgagcatgaagcatctttggctagacccacagctttgttgaaaagggttt
accctggatgcttgaagaagtcctatagcactcaggcaataggtagggaa
ctggggaccacagttctaattagaagacaagatctctgtcctcagtcaca
ttgcacggatcgtttgaaaaatgaaacacatggttggtttcctattgttg
tctccctctcctccacccgagcccttagagctgccctgagttcatgctgt
aggagcccagcctcagctatctcccaggcttattcagcttctgagtcact
cattacccagtgccattttatccttcttaaacctaccatcttggtatgaa
gcctgctccctcacgctcttacccattggtcctgtgaatgagcccaaagg
gcaggtctgttccctcttagctccaaacaactgtccaggtgttgtttgag
tctaggagtcaccaaccatttctcacattcttaaagggttttcttagtgg
cttagcactacatgtccttggaaagttagaaaacacatttgcaaacattg
gggtcacgcccatgttacagttacagaactcagagaaagggcttgctttc
agttacatggagcattagcagcagcagaaccataatccctgctctaattc
acaatttaaaactagcaaaagaaacaattcctcaaactgtagatccatga
aatctaccgataacagtggttttttctttcattttttgattacattcctt
agatatttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_94985882_94987010
seq2: B6Ng01-319I22.g_67_1175

seq1  GAATTCTGGTCCATGAATGCCCCCTCTTGGAGAGAGGAGACTCAGATCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGTCCATGAATGCCCCCTCTTGGAGAGAGGAGACTCAGATCAC  50

seq1  TGCCCCTCCACCCCATCCATGGCTATAGAAGAGGTAGATAGTTGGGGTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCTCCACCCCATCCATGGCTATAGAAGAGGTAGATAGTTGGGGTGG  100

seq1  GCTCTTCAGTATGTGGCTGATGTAAGTGGCTGGATGTAAACTGAGGAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTCAGTATGTGGCTGATGTAAGTGGCTGGATGTAAACTGAGGAATT  150

seq1  TTGCTGTGGCACAGCTGCCCTTGAGTCTCCGCTGCTCCTCCTGTAAATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGTGGCACAGCTGCCCTTGAGTCTCCGCTGCTCCTCCTGTAAATGA  200

seq1  TCCCAACAAACCCATTGTTTCACCAAGCTGGACCTCCATAAAATCTTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAACAAACCCATTGTTTCACCAAGCTGGACCTCCATAAAATCTTTTC  250

seq1  TTTGGTCTGTTGGTGTCCCACCTAAAGTGGGTGAATAGACTCCTTTATGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTCTGTTGGTGTCCCACCTAAAGTGGGTGAATAGACTCCTTTATGG  300

seq1  CTCCCAGCAAGTCACCAGACACACACCTTCCTGTGTGGCCAGCTCTGTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCAGCAAGTCACCAGACACACACCTTCCTGTGTGGCCAGCTCTGTCT  350

seq1  TGAGCATGAAGCATCTTTGGCTAGACCCACAGCTTTGTTGAAAAGGGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCATGAAGCATCTTTGGCTAGACCCACAGCTTTGTTGAAAAGGGTTT  400

seq1  ACCCTGGATGCTTGAAGAAGTCCTATAGCACTCAGGCAATAGGTAGGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGGATGCTTGAAGAAGTCCTATAGCACTCAGGCAATAGGTAGGGAA  450

seq1  CTGGGGACCACAGTTCTAATTAGAAGACAAGATCTCTGTCCTCAGTCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGACCACAGTTCTAATTAGAAGACAAGATCTCTGTCCTCAGTCACA  500

seq1  TTGCACGGATCGTTTGAAAAATGAAACACATGGTTGGTTTCCTATTGTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCACGGATCGTTTGAAAAATGAAACACATGGTTGGTTTCCTATTGTTG  550

seq1  TCTCCCTCTCCTCCACCCGAGCCCTTAGAGCTGCCCTGAGTTCATGCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCTCTCCTCCACCCGAGCCCTTAGAGCTGCCCTGAGTTCATGCTGT  600

seq1  AGGAGCCCAGCCTCAGCTATCTCCCAGGCTTATTCAGCTTCTGAGTCACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCCCAGCCTCAGCTATCTCCCAGGCTTATTCAGCTTCTGAGTCACT  650

seq1  CATTACCCAGTGCCATTTTATCCTTCTTAAACCTACCATCTTGGTATGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACCCAGTGCCATTTTATCCTTCTTAAACCTACCATCTTGGTATGAA  700

seq1  GCCTGCTCCCTCACGCTCTTACCCATTGGTCCTGTGAATGAGCCCAAAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCTCCCTCACGCTCTTACCCATTGGTCCTGTGAATGAGCCCAAAGG  750

seq1  GCAGGTCTGTTCCCTCTTAGCTCCAAACAACTGTCCAGGTGTTGTTTGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTCTGTTCCCTCTTAGCTCCAAACAACTGTCCAGGTGTTGTTTGAG  800

seq1  TCTAGGAGTCACCAACCATTTCTCACATTCTT-AAGGGTTTTCTTAGTGG  849
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TCTAGGAGTCACCAACCATTTCTCACATTCTTAAAGGGTTTTCTTAGTGG  850

seq1  CTTAGGCACTACATGTCCTTGGAAAGTTAGAAAACACATTTGCAAACATT  899
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTA-GCACTACATGTCCTTGGAAAGTTAGAAAACACATTTGCAAACATT  899

seq1  GGGGTCACGCCCATGTTACAGTTACAGAACTCAGGAGAAAGGGCTTTGCT  949
      ||||||||||||||||||||||||||||||||| |||||||||| |||||
seq2  GGGGTCACGCCCATGTTACAGTTACAGAACTCA-GAGAAAGGGC-TTGCT  947

seq1  TTCAGTTACATGGAGCATTAGCAGCAGGCAGAACCATAATCCTTGCTCTT  999
      |||||||||||||||||||||||||| ||||||||||||||| ||||| |
seq2  TTCAGTTACATGGAGCATTAGCAGCA-GCAGAACCATAATCCCTGCTC-T  995

seq1  AATTCACAATTTAAAAACTAGCAAAAGAAAACATT-CTCAAACTGTAGAT  1048
      |||||||||||| |||||||||||||||||  ||| ||||||||||||||
seq2  AATTCACAATTT-AAAACTAGCAAAAGAAACAATTCCTCAAACTGTAGAT  1044

seq1  CCATGAAAATCTACCGATAACAGGTTTGTTTTTTTCTTTTCTATTTTTTT  1098
      ||||| |||||||||||||||||   || |||||||||     |  ||||
seq2  CCATG-AAATCTACCGATAACAG---TGGTTTTTTCTT-----TCATTTT  1085

seq1  TTGATTTTTACATTTTCTTTAGATTTATTTT  1129
      ||||   |||||  ||| |||||  ||||||
seq2  TTGA---TTACA--TTCCTTAGA--TATTTT  1109