BAC Information

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BAC

Clone NameB6Ng01-320A03
Chromosome8 (Build37)
Map Location 6,783,640 - 6,784,835
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040360
Downstream geneEG665127, EG546032
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-320A03.bB6Ng01-320A03.g
ACCGA109497GA109498
length1,2111,178
definitionB6Ng01-320A03.b B6Ng01-320A03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctccttatagacttccattaagacttttatattacattaatgcct
acacagcatatatatggtgtgtgtattatatacacatatacatatatatg
gtctgtgaatatatattcacatatatatgaatctggaagtataaaggata
cagctatgaaaacattgaaaatgatttgatataaacaatcacatatatag
tatctgtacatttatatctaaatagcaatatatttcttttatttggttgt
ttaaaccaataactatttgttgtactattgcaaataaatattaatttgat
actgcaattgttaactccttcaaaaacatccttatacttacagacaaatg
tcactcatggataggaactgagaaacacggtgtagttctgtgatgattga
gtaccttttaaatacaggaaaattacatgacctcacaatattaaatagtt
tttgaagtgtaaaatattgccaactatgagcatgaagattcagagatttc
aggaacatacttatcttaaacaacctaaagtatagatatattcttcataa
aaaatttttctatcatgtcaacattataaaaatgtaaatccatcatgagt
aagaagcatgaaaaaatctaattgctgaacctatatgagtttcatattac
ttcagcaataaacaaaactttgtaggatctcataaatcttctccaagaag
atataataagtctccttttattgtttatttctactgggtaaacagttatc
agtgaagcctaaatattgtttctttattcagaaacttgaattttctccaa
tagtcataggatatatttcatgggaaatactaataaaaggcaggttatat
atacataaattagcattaggttcaacttgtgatctatttgtgagagtttg
atagccttcagatatccttattgtataaaaaaaaaaaatcacatgggcca
ggctcataccacatgggaatggtactagttgggccaggctatcaaaacaa
gtattacaatgtggggtggttaaacaactaaatgttattgtcaagaattc
taaagaaggtcaggttgtcagtagaattggagtcctttccaaggttccaa
ggaggctttgtttatgccctcttattcactggttattacaactggctggt
gctccccgaaatagaacaggcactctaaagtcctggcttcattccagtcc
atggcctatct

gaattcctgatttttccaagacttttatcatgaattggattttgtcaaat
gctttctctgcatttaacatgatgatcatgtgttttttgttttgagtttg
tttatataatggattacgttgatggatttccgtatattgaaccatccctg
catccctggaatgaaacctacttggtcaggatggatgtttgttttaatgt
gttcttggattcggttagcaagaattttattgagtatttttgcatcgtta
ttcataagggaaattgatctgaagtcctctatctttgttggatctttctg
tggtttaggtatcagagtaattgtggcttcatagaatgaactgggtagag
tactgtctgcttctattttgtggaatagtttgtgcagaactggaattaga
tcttctttgaagttctgatagaactctgcactaaacccatctggtcctag
gctatttctggttggtagactattaatgactgcttctatttctttaggga
atatgggactgtttagatcattaacttgatcctgatttaactttggtacc
tggtaagtgtctagaaatgtgtccatttcatccatgttttccagttttgt
tgagtataggcttttgtggaagaatctgatggtgttttggatttcttcag
gatctgttgttatgtttcccttttcatttctgattttgttaattaggatg
ttgtccctgtgccctctagtgtgtctggctaagggtttaatctatgttgt
tgattttcttaaagaaacagctcctcttttgtttgattttttgaatagtt
cttcttagtttccatttggttgattttgcccctgagttttgattatttcc
tgctgtgtactcctcttgggtgaatttgcttctttttcttctagagcttt
tagatgtattgtcaagctgctagtgtgtgctctctctagttttctctttg
gagcacttcagagctatgagttttccctcttagaaaatgcttcatgtgtt
ccataagtttggggtgtgttgtgtcttcatttcatcaaactctaaaaagt
atttaatttcttcttttattctttctgaacctaggtatcattgagaagag
gtgtgttcagttttccaatgaatgcagcctttctattattcatggcttga
tattgaagagatactgcgccctgagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_6783640_6784835
seq2: B6Ng01-320A03.b_43_1253 (reverse)

seq1  AGATAGG-CATGAA--TGAATGAAGGCA-GAAATTAGAGTG-CTG-TCTA  44
      ||||||| |||| |   |||||||| || ||  |||||||| ||| ||||
seq2  AGATAGGCCATGGACTGGAATGAAGCCAGGACTTTAGAGTGCCTGTTCTA  50

seq1  TTTGGGGGGGGCACAGCAGTTTGTAATAACCAGTGA--TAGA-GGCATAA  91
      ||| |||| |   ||||   ||||||||||||||||   ||| |||||||
seq2  TTTCGGGGAGCACCAGCCAGTTGTAATAACCAGTGAATAAGAGGGCATAA  100

seq1  ACAAAGCCTCCTTTGGGACTTTGG-AAGGACT-CAATTCTACTGACAACC  139
      ||||||||||| |||| || |||| ||||||| |||||||||||||||||
seq2  ACAAAGCCTCC-TTGGAACCTTGGAAAGGACTCCAATTCTACTGACAACC  149

seq1  TGACC-TCTTTAGAATTCTTGACAAT-ACATTTAGTTGTTTAACCA-CCC  186
      ||||| |||||||||||||||||||| ||||||||||||||||||| |||
seq2  TGACCTTCTTTAGAATTCTTGACAATAACATTTAGTTGTTTAACCACCCC  199

seq1  ACATTGTAATACTTTGTTTTGATAGCCTGG-CCAACTAGTACCATTCCCA  235
      |||||||||||| ||||||||||||||||| |||||||||||||||||||
seq2  ACATTGTAATAC-TTGTTTTGATAGCCTGGCCCAACTAGTACCATTCCCA  248

seq1  TGTGGTATGAGCCTGG-CCATGTGA-TTTTTTTTTTTATACAATAAGGAT  283
      |||||||||||||||| |||||||| ||||||||||||||||||||||||
seq2  TGTGGTATGAGCCTGGCCCATGTGATTTTTTTTTTTTATACAATAAGGAT  298

seq1  ATCTGAAGGCTATCAAACTCTCACAAATAGATCACAAGTTGAACCTAATG  333
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAAGGCTATCAAACTCTCACAAATAGATCACAAGTTGAACCTAATG  348

seq1  CTAATTTATGTATATATAACCTGCCTTTTATTAGTATTTCCCATGAAATA  383
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTTATGTATATATAACCTGCCTTTTATTAGTATTTCCCATGAAATA  398

seq1  TATCCTATGACTATTGGAGAAAATTCAAGTTTCTGAATAAAGAAACAATA  433
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTATGACTATTGGAGAAAATTCAAGTTTCTGAATAAAGAAACAATA  448

seq1  TTTAGGCTTCACTGATAACTGTTTACCCAGTAGAAATAAACAATAAAAGG  483
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGCTTCACTGATAACTGTTTACCCAGTAGAAATAAACAATAAAAGG  498

seq1  AGACTTATTATATCTTCTTGGAGAAGATTTATGAGATCCTACAAAGTTTT  533
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTATTATATCTTCTTGGAGAAGATTTATGAGATCCTACAAAGTTTT  548

seq1  GTTTATTGCTGAAGTAATATGAAACTCATATAGGTTCAGCAATTAGATTT  583
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTGCTGAAGTAATATGAAACTCATATAGGTTCAGCAATTAGATTT  598

seq1  TTTCATGCTTCTTACTCATGATGGATTTACATTTTTATAATGTTGACATG  633
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATGCTTCTTACTCATGATGGATTTACATTTTTATAATGTTGACATG  648

seq1  ATAGAAAAATTTTTTATGAAGAATATATCTATACTTTAGGTTGTTTAAGA  683
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAAAATTTTTTATGAAGAATATATCTATACTTTAGGTTGTTTAAGA  698

seq1  TAAGTATGTTCCTGAAATCTCTGAATCTTCATGCTCATAGTTGGCAATAT  733
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTATGTTCCTGAAATCTCTGAATCTTCATGCTCATAGTTGGCAATAT  748

seq1  TTTACACTTCAAAAACTATTTAATATTGTGAGGTCATGTAATTTTCCTGT  783
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACACTTCAAAAACTATTTAATATTGTGAGGTCATGTAATTTTCCTGT  798

seq1  ATTTAAAAGGTACTCAATCATCACAGAACTACACCGTGTTTCTCAGTTCC  833
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAAGGTACTCAATCATCACAGAACTACACCGTGTTTCTCAGTTCC  848

seq1  TATCCATGAGTGACATTTGTCTGTAAGTATAAGGATGTTTTTGAAGGAGT  883
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCATGAGTGACATTTGTCTGTAAGTATAAGGATGTTTTTGAAGGAGT  898

seq1  TAACAATTGCAGTATCAAATTAATATTTATTTGCAATAGTACAACAAATA  933
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAATTGCAGTATCAAATTAATATTTATTTGCAATAGTACAACAAATA  948

seq1  GTTATTGGTTTAAACAACCAAATAAAAGAAATATATTGCTATTTAGATAT  983
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTGGTTTAAACAACCAAATAAAAGAAATATATTGCTATTTAGATAT  998

seq1  AAATGTACAGATACTATATATGTGATTGTTTATATCAAATCATTTTCAAT  1033
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTACAGATACTATATATGTGATTGTTTATATCAAATCATTTTCAAT  1048

seq1  GTTTTCATAGCTGTATCCTTTATACTTCCAGATTCATATATATGTGAATA  1083
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCATAGCTGTATCCTTTATACTTCCAGATTCATATATATGTGAATA  1098

seq1  TATATTCACAGACCATATATATGTATATGTGTATATAATACACACACCAT  1133
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTCACAGACCATATATATGTATATGTGTATATAATACACACACCAT  1148

seq1  ATATATGCTGTGTAGGCATTAATGTAATATAAAAGTCTTAATGGAAGTCT  1183
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATGCTGTGTAGGCATTAATGTAATATAAAAGTCTTAATGGAAGTCT  1198

seq1  ATAAGGAGAATTC  1196
      |||||||||||||
seq2  ATAAGGAGAATTC  1211


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