BAC Information

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BAC

Clone NameB6Ng01-320E13
Chromosome8 (Build37)
Map Location 79,584,992 - 79,586,025
singlet/doubletsinglet
Overlap geneNr3c2
Upstream geneLOC100039185, EG631594, LOC666226, LOC100039211, LOC384847
Downstream geneArhgap10, LOC100039235, AI931714, Tmem34, Ednra, EG622803
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-320E13.bB6Ng01-320E13.g
ACCGA109693GA109694
length1,2241,028
definitionB6Ng01-320E13.b B6Ng01-320E13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagccccatcttttaagagggttatttgatt
ttctggagtccaccctcttgagttctttatatatattggatattagtccc
ctatctgatttaagataggtaaagatccattcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaagctttggagtttca
tgaggtcccatttgtcaatcctctatcttacagcacaagccattgctgtt
ctattcatgattttttcccctgtgtccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagtttcttga
tccacttagatttgaccttagtacaaggagataggaatggatcaatttcc
attcttctacatgataacagccagttgtgccagcaccatttgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccatatgtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttaagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatagggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaattagcctccaaatgatgacaccattgcatacact
agcaagcgtttgttgcaaggatcgtgatatagctgtctcttgtgagacta
ggcccggggcctagcaaacacagaagtgggatgctcacagtcaactattg
ggatggatcacagggctcccaaatggaggagcttagaagaaagtgtaaaa
ggagcctaaagaggatcttgaaacctgtaagtgcaacattatgaactaac
agtaactcgaagctctggactcctagctgccatatgtatcaaaagaagtg
ccttgtcgccatacactggcaaatgaggtcccaccggacacagcaaacac
tttatatatagcgcctcacgtcag
gaattctttctttttctcagcaatgaaaagagtaagagacacataccccc
tttatgttctagctttgaaaccattgaaacttgagttcaaatactgtcaa
aagaaaaataaagatttagactgatttcttgacttgtggaataggtgatt
tccatgctaacaagttggtgacaaatttttggaaatttgttcccctaagg
aaaaatggcatatgagtgaacagaacaaagctttgtggaaagcagagccc
tagataagcagcatctttaattgcatgtcttccagctactgagagagccc
cataactaccaggaatatgccgcttatgtctgcaaggctaatgccaggga
agaggattctcaaggaccagaagttcacagttatcctcaactacatgtca
cattttggaacagcctgggatacatgagaccctgctatttttttaagggc
aaaattctttgcaaattcaatgtgtacattgtgctctaccagctaagact
gaaggaggttgatggagcatcatttaccaaaatgactgtgggagaatctg
caaatttatgatcctgaccattctgcccattgactgggtgtccttagtca
aattatgtgacctctctgtacctcagttctattcctaataatattaggag
gcaggatttagatgacctctgaggtatttctcatgaaagatgatagattt
tttgtgccaatcaacacatggagatgctccatttgagattcccgtcacag
gtgacatacagaccaggctttcccacacacgagctttctttcagatcata
agtttataacgtgtccctaatatttaattctcttgtagttttaaccttta
atattttgtaatttcactagttgctgagtaaaatgcttgtattagctttg
aaaacattttatgccagacttagggagaaaaaccaagagactaaaaattc
atggttagccattcaaaaataaaataataagcaaaggtagtctcaagtct
tcagttcacagtcatcagaagtgtatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_79584992_79586025
seq2: B6Ng01-320E13.g_65_1092 (reverse)

seq1  AGATACACTTTCTGATTGAACTGTGAACTTGAAGACTTGAGACCTAACTT  50
      |||||||| |||||||   ||||||||| ||||||||||||| ||| |||
seq2  AGATACAC-TTCTGAT--GACTGTGAAC-TGAAGACTTGAGA-CTACCTT  45

seq1  TGCTTA-TATTTTATTTTTGAATGGCTAACCATGAATTTTTAGTCTCTTG  99
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTATTATTTTATTTTTGAATGGCTAACCATGAATTTTTAGTCTCTTG  95

seq1  GTTTTTTCTTCCCTAAGTCTGGCATAAAATGTTTTCAAAGCTAATACAAG  149
      ||||||   |||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTT--CTCCCTAAGTCTGGCATAAAATGTTTTCAAAGCTAATACAAG  143

seq1  CATTTTACTCAGCAACTAGTGAAATTACAAAATATTTAAGGTTAAAACTA  199
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CATTTTACTCAGCAACTAGTGAAATTACAAAATATTAAAGGTTAAAACTA  193

seq1  CAAGAGAATTAAATATTAGGGACACGTTATAAACTTATGATCTGAAAGAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGAATTAAATATTAGGGACACGTTATAAACTTATGATCTGAAAGAA  243

seq1  AGCTCGTGTGTGGGAAAGCCTGGTCTGTATGTCACCTGTGACGGGAATCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCGTGTGTGGGAAAGCCTGGTCTGTATGTCACCTGTGACGGGAATCT  293

seq1  CAAATGGAGCATCTCCATGTGTTGATTGGCACAAAAAATCTATCATCTTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGGAGCATCTCCATGTGTTGATTGGCACAAAAAATCTATCATCTTT  343

seq1  CATGAGAAATACCTCAGAGGTCATCTAAATCCTGCCTCCTAATATTATTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGAAATACCTCAGAGGTCATCTAAATCCTGCCTCCTAATATTATTA  393

seq1  GGAATAGAACTGAGGTACAGAGAGGTCACATAATTTGACTAAGGACACCC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATAGAACTGAGGTACAGAGAGGTCACATAATTTGACTAAGGACACCC  443

seq1  AGTCAATGGGCAGAATGGTCAGGATCATAAATTTGCAGATTCTCCCACAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAATGGGCAGAATGGTCAGGATCATAAATTTGCAGATTCTCCCACAG  493

seq1  TCATTTTGGTAAATGATGCTCCATCAACCTCCTTCAGTCTTAGCTGGTAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTGGTAAATGATGCTCCATCAACCTCCTTCAGTCTTAGCTGGTAG  543

seq1  AGCACAATGTACACATTGAATTTGCAAAGAATTTTGCCCTTAAAAAAATA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAATGTACACATTGAATTTGCAAAGAATTTTGCCCTTAAAAAAATA  593

seq1  GCAGGGTCTCATGTATCCCAGGCTGTTCCAAAATGTGACATGTAGTTGAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGTCTCATGTATCCCAGGCTGTTCCAAAATGTGACATGTAGTTGAG  643

seq1  GATAACTGTGAACTTCTGGTCCTTGAGAATCCTCTTCCCTGGCATTAGCC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAACTGTGAACTTCTGGTCCTTGAGAATCCTCTTCCCTGGCATTAGCC  693

seq1  TTGCAGACATAAGCGGCATATTCCTGGTAGTTATGGGGCTCTCTCAGTAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGACATAAGCGGCATATTCCTGGTAGTTATGGGGCTCTCTCAGTAG  743

seq1  CTGGAAGACATGCAATTAAAGATGCTGCTTATCTAGGGCTCTGCTTTCCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAGACATGCAATTAAAGATGCTGCTTATCTAGGGCTCTGCTTTCCA  793

seq1  CAAAGCTTTGTTCTGTTCACTCATATGCCATTTTTCCTTAGGGGAACAAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCTTTGTTCTGTTCACTCATATGCCATTTTTCCTTAGGGGAACAAA  843

seq1  TTTCCAAAAATTTGTCACCAACTTGTTAGCATGGAAATCACCTATTCCAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAAAAATTTGTCACCAACTTGTTAGCATGGAAATCACCTATTCCAC  893

seq1  AAGTCAAGAAATCAGTCTAAATCTTTATTTTTCTTTTGACAGTATTTGAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAAGAAATCAGTCTAAATCTTTATTTTTCTTTTGACAGTATTTGAA  943

seq1  CTCAAGTTTCAATGGTTTCAAAGCTAGAACATAAAGGGGGTATGTGTCTC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGTTTCAATGGTTTCAAAGCTAGAACATAAAGGGGGTATGTGTCTC  993

seq1  TTACTCTTTTCATTGCTGAGAAAAAGAAAGAATTC  1034
      |||||||||||||||||||||||||||||||||||
seq2  TTACTCTTTTCATTGCTGAGAAAAAGAAAGAATTC  1028