BAC Information

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BAC

Clone NameB6Ng01-320N23
Chromosome17 (Build37)8 (Build37)
Map Location 77,331,401 - 77,331,67344,521,466 - 44,521,538
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100043886
Downstream geneEG624348, LOC545234, LOC100043887
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-320N23.bB6Ng01-320N23.g
ACCGA110130GA110131
length273385
definitionB6Ng01-320N23.b B6Ng01-320N23.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(77,331,401 - 77,331,673)(44,521,466 - 44,521,538)
sequence
agattagctttggcatctgatccaagatacaggttagatgagatttaagc
tataaagaaacagtattttcagatgactttgtaagtattaatgtgactta
tgacatactccatatctgcaggaacttagttgtccttgttcttccttcag
atttacttaatacccaggatattttctgccattacagaatagtagtttcc
agaaggactgcctccacctcccaagtgccttcaattctattcgggcgggc
acgcgcgtgcgtgtgtgtgtgtg

aattgagttggccaagaggatcccatggaaatacccaaacaacccagact
gttggacagtcaaagggtggctctgcagactgacaaaagagccccactga
caaggacagccaccatacaactcattgagctcagagaagtcatgctggtg
cctacaagggtccttcacctacacaatctcttctctacagtagagctctg
actcttgcgcttgctttggagattattctcttcctgtagggttgttatgt
ctaattttaatatgatagttttgctttatcttattaaactttatcttgcc
atgtttggttgttatttcttttaggggggagttgggttttttgtttgttt
gtctgtttcgctttgttttgtttttgtttttggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_77331401_77331673
seq2: B6Ng01-320N23.b_50_322

seq1  AGATTAGCTTTGGCATCTGATCCAAGATACAGGTTAGATGAGATTTAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTAGCTTTGGCATCTGATCCAAGATACAGGTTAGATGAGATTTAAGC  50

seq1  TATAAAGAAACAGTATTTTCAGATGACTTTGTAAGTATTAATGTGACTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAGAAACAGTATTTTCAGATGACTTTGTAAGTATTAATGTGACTTA  100

seq1  TGACATACTCCATATCTGCAGGAACTTAGTTGTCCTTGTTCTTCCTTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATACTCCATATCTGCAGGAACTTAGTTGTCCTTGTTCTTCCTTCAG  150

seq1  ATTTACTTAATACCCAGGATATTTTCTGCCATTACAGAATAGTAGTTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACTTAATACCCAGGATATTTTCTGCCATTACAGAATAGTAGTTTCC  200

seq1  AGAAGGACTGCCTCCACCTCCCAAGTGCCTTCAATTCTATTCGGGCGGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGACTGCCTCCACCTCCCAAGTGCCTTCAATTCTATTCGGGCGGGC  250

seq1  ACGCGCGTGCGTGTGTGTGTGTG  273
      |||||||||||||||||||||||
seq2  ACGCGCGTGCGTGTGTGTGTGTG  273


seq1: chr8_44521466_44521538
seq2: B6Ng01-320N23.g_391_457 (reverse)

seq1  AACCAAAAAC--AAACAAAAC------AACCAACCAACCAAACAAAAAAC  42
      ||||||||||  |||||||||      || ||  ||| ||||||||||||
seq2  AACCAAAAACAAAAACAAAACAAAGCGAAACAGACAAACAAACAAAAAAC  50

seq1  CCAAAATGAAGCAAAAGTCTTCCCCCTAAAA  73
      ||||              || ||||||||||
seq2  CCAA--------------CTCCCCCCTAAAA  67


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