BAC Information

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BAC

Clone NameB6Ng01-320P12
Chromosome8 (Build37)
Map Location 91,957,334 - 92,076,025
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100040369, Nkd1, 9130017C17Rik, Nod2, Cyld, LOC675985, Sall1, LOC100041089, EG625801, EG384862
Downstream geneTox3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-320P12.bB6Ng01-320P12.g
ACCGA110202GA110203
length7201,121
definitionB6Ng01-320P12.b B6Ng01-320P12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(92,075,306 - 92,076,025)(91,957,334 - 91,958,449)
sequence
gaattcagcaatcacaagtaccacaggtaaatctggtggagaacattttg
ggggcttggcttcctagcctcaggatatcaaataatagaggattttaaaa
ggccaatctaatatttcatatggaaacttccagaaaagcaaacttaagaa
agcctacatgagaaatttatggtctccctgcccttatgtaaataatcagg
ccagagttaatgagagcagtctgattttgagatcaggtcccacctttctt
tgaggggaggagagtataaggaaatttgaaataacctgaagaagtcataa
aagatctttcatatatgagctgtgaggacagctttccagcttttctgatt
ctaccataatggctgtgaagtgtggggtctagagacccgacccaaggcac
tgatcctattggcaagctttgagcacaggggcctcaggctccctgtggag
cactcccagagagcacttcccgagggaggaagcttggctccattggcaag
tgtttttcaaccttcaccaactgagactggagctgctctttggcttctcc
tctgaaccggttgtgacatgtgcattgttcgctcattttgtttaatgact
taaataaaaattttgacatgtgttcactgtatagctgtgtgagagtcaga
gttttatcctccctctctctctctctctctctctctctctctctctctct
ctctctctctctctctctct

gaattctagccctttggccagcaggagatgttggtgggagattgagagca
ggaggcagagagaagggtctttctcccccttcctctctgttttttttttc
tgataactaaggcactgtctgagcagaagacacaggagtcccagccaatc
tgttagtcctcctgcatgatgtcagcttctcatttaaagtgttatctctg
gtgggttggagcatacttcctaaacagacaaattcaaccccaactcccat
aattctgtgagaatgactttacttgtggacagttattttaaatgtaatta
gtcaagatgaaatcacactctggcacgggaagccctattctttaagagtg
ctccctgtataagagaagacagaatggaaaaggagaccatgtggtgactg
gacagagactgaagtgatgtttggataaaccaagcaacagcaagtgctgt
tgactctgtgaagaagacagggaacagcctttccctcaaagccttcagaa
ggaacctacgtgaacacttggaatataaatagttatcccctgggactgtg
gacaaataaactgatgttgtttaaaccatctaggtcacagtaacttctta
aggacttcgatggcttgggggcaccctcctcctctcacctttctgctcat
tctgcaaggcaaataacagaagatgcttgctagcagccaacctccaggct
gccctactctccctctgatttcttctcaaactttatgggacctgtaaaac
ccacctttcctgctcagctcccagtctcggttttctcatggggcccagag
tgatgctcaaatatatctgatcttcataatatacttactacattccagcc
actggtttaagtattttaccagtattgttgcatttaatcctcttgtcaat
cttttgacagaagctctgcttactgctctgaacagagggaatgaggaaaa
ggaaagaatgcagtccagaaaagaccaagtaactagttaagggacaaatg
gagtttcaaatttcagctgggctgactagaagaaactagatctagaacac
tacctactattgcctacctatggtctcgccctgactttctcttaagcctg
ctgctatcgaccaagcttctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_92075306_92076025
seq2: B6Ng01-320P12.b_48_767 (reverse)

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  50

seq1  AGAGAGAGGGAGGATAAAACTCTGACTCTCACACAGCTATACAGTGAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGGGAGGATAAAACTCTGACTCTCACACAGCTATACAGTGAACA  100

seq1  CATGTCAAAATTTTTATTTAAGTCATTAAACAAAATGAGCGAACAATGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCAAAATTTTTATTTAAGTCATTAAACAAAATGAGCGAACAATGCA  150

seq1  CATGTCACAACCGGTTCAGAGGAGAAGCCAAAGAGCAGCTCCAGTCTCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCACAACCGGTTCAGAGGAGAAGCCAAAGAGCAGCTCCAGTCTCAG  200

seq1  TTGGTGAAGGTTGAAAAACACTTGCCAATGGAGCCAAGCTTCCTCCCTCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGAAGGTTGAAAAACACTTGCCAATGGAGCCAAGCTTCCTCCCTCG  250

seq1  GGAAGTGCTCTCTGGGAGTGCTCCACAGGGAGCCTGAGGCCCCTGTGCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTGCTCTCTGGGAGTGCTCCACAGGGAGCCTGAGGCCCCTGTGCTC  300

seq1  AAAGCTTGCCAATAGGATCAGTGCCTTGGGTCGGGTCTCTAGACCCCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTTGCCAATAGGATCAGTGCCTTGGGTCGGGTCTCTAGACCCCACA  350

seq1  CTTCACAGCCATTATGGTAGAATCAGAAAAGCTGGAAAGCTGTCCTCACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACAGCCATTATGGTAGAATCAGAAAAGCTGGAAAGCTGTCCTCACA  400

seq1  GCTCATATATGAAAGATCTTTTATGACTTCTTCAGGTTATTTCAAATTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATATATGAAAGATCTTTTATGACTTCTTCAGGTTATTTCAAATTTC  450

seq1  CTTATACTCTCCTCCCCTCAAAGAAAGGTGGGACCTGATCTCAAAATCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATACTCTCCTCCCCTCAAAGAAAGGTGGGACCTGATCTCAAAATCAG  500

seq1  ACTGCTCTCATTAACTCTGGCCTGATTATTTACATAAGGGCAGGGAGACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTCTCATTAACTCTGGCCTGATTATTTACATAAGGGCAGGGAGACC  550

seq1  ATAAATTTCTCATGTAGGCTTTCTTAAGTTTGCTTTTCTGGAAGTTTCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTTCTCATGTAGGCTTTCTTAAGTTTGCTTTTCTGGAAGTTTCCA  600

seq1  TATGAAATATTAGATTGGCCTTTTAAAATCCTCTATTATTTGATATCCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAATATTAGATTGGCCTTTTAAAATCCTCTATTATTTGATATCCTG  650

seq1  AGGCTAGGAAGCCAAGCCCCCAAAATGTTCTCCACCAGATTTACCTGTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTAGGAAGCCAAGCCCCCAAAATGTTCTCCACCAGATTTACCTGTGG  700

seq1  TACTTGTGATTGCTGAATTC  720
      ||||||||||||||||||||
seq2  TACTTGTGATTGCTGAATTC  720


seq1: chr8_91957334_91958449
seq2: B6Ng01-320P12.g_68_1188

seq1  GAATTCTAGCCCTTTGGCCAGCAGGAGATGTTGGTGGGAGATTGAGAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGCCCTTTGGCCAGCAGGAGATGTTGGTGGGAGATTGAGAGCA  50

seq1  GGAGGCAGAGAGAAGGGTCTTTCTCCCCCTTCCTCTCTGTTTTTTTTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCAGAGAGAAGGGTCTTTCTCCCCCTTCCTCTCTGTTTTTTTTTTC  100

seq1  TGATAACTAAGGCACTGTCTGAGCAGAAGACACAGGAGTCCCAGCCAATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAACTAAGGCACTGTCTGAGCAGAAGACACAGGAGTCCCAGCCAATC  150

seq1  TGTTAGTCCTCCTGCATGATGTCAGCTTCTCATTTAAAGTGTTATCTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGTCCTCCTGCATGATGTCAGCTTCTCATTTAAAGTGTTATCTCTG  200

seq1  GTGGGTTGGAGCATACTTCCTAAACAGACAAATTCAACCCCAACTCCCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTTGGAGCATACTTCCTAAACAGACAAATTCAACCCCAACTCCCAT  250

seq1  AATTCTGTGAGAATGACTTTACTTGTGGACAGTTATTTTAAATGTAATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTGTGAGAATGACTTTACTTGTGGACAGTTATTTTAAATGTAATTA  300

seq1  GTCAAGATGAAATCACACTCTGGCACGGGAAGCCCTATTCTTTAAGAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGATGAAATCACACTCTGGCACGGGAAGCCCTATTCTTTAAGAGTG  350

seq1  CTCCCTGTATAAGAGAAGACAGAATGGAAAAGGAGACCATGTGGTGACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTGTATAAGAGAAGACAGAATGGAAAAGGAGACCATGTGGTGACTG  400

seq1  GACAGAGACTGAAGTGATGTTTGGATAAACCAAGCAACAGCAAGTGCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAGACTGAAGTGATGTTTGGATAAACCAAGCAACAGCAAGTGCTGT  450

seq1  TGACTCTGTGAAGAAGACAGGGAACAGCCTTTCCCTCAAAGCCTTCAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCTGTGAAGAAGACAGGGAACAGCCTTTCCCTCAAAGCCTTCAGAA  500

seq1  GGAACCTACGTGAACACTTGGAATATAAATAGTTATCCCCTGGGACTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACCTACGTGAACACTTGGAATATAAATAGTTATCCCCTGGGACTGTG  550

seq1  GACAAATAAACTGATGTTGTTTAAACCATCTAGGTCACAGTAACTTCTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAATAAACTGATGTTGTTTAAACCATCTAGGTCACAGTAACTTCTTA  600

seq1  AGGACTTCGATGGCTTGGGGGCACCCTCCTCCTCTCACCTTTCTGCTCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTTCGATGGCTTGGGGGCACCCTCCTCCTCTCACCTTTCTGCTCAT  650

seq1  TCTGCAAGGCAAATAACAGAAGATGCTTGCTAGCAGCCAACCTCCAGGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAAGGCAAATAACAGAAGATGCTTGCTAGCAGCCAACCTCCAGGCT  700

seq1  GCCCTACTCTCCCTCTGATTTCTTCTCAAACTTTATGGGACCTGTAAAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTACTCTCCCTCTGATTTCTTCTCAAACTTTATGGGACCTGTAAAAC  750

seq1  CCACCTTTCCTGCTCAGCTCCCAGTCTCGGTTTTCTCATGGGGCCCAGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTTTCCTGCTCAGCTCCCAGTCTCGGTTTTCTCATGGGGCCCAGAG  800

seq1  TGATGCTCAAATATATCTGATCTTCATAATATACTTACTACATTCCAGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCTCAAATATATCTGATCTTCATAATATACTTACTACATTCCAGCC  850

seq1  ACTGGTTTAAGTATTTTACCAGTATTGTTGCATTTAATCCTCTTGTCAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTTTAAGTATTTTACCAGTATTGTTGCATTTAATCCTCTTGTCAAT  900

seq1  CTTTTGACAGAAGCTCTGCTTACTGCTCTGAACAGAGGGAATGAGGAAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGACAGAAGCTCTGCTTACTGCTCTGAACAGAGGGAATGAGGAAAA  950

seq1  GGAAAGAATGCAGTCCAG-AAAGACCAAGTAACTAGTT-AGGGACAAATG  998
      |||||||||||||||||| ||||||||||||||||||| |||||||||||
seq2  GGAAAGAATGCAGTCCAGAAAAGACCAAGTAACTAGTTAAGGGACAAATG  1000

seq1  GAGTTTCAAATTCAGGCTGGGCTGACTAGAGAAACCTAGATCTAG-ACAC  1047
      ||||||||||||   |||||||||||||||  || |||||||||| ||||
seq2  GAGTTTCAAATTTCAGCTGGGCTGACTAGAAGAAACTAGATCTAGAACAC  1050

seq1  TACCCTACTAT--GCTA-CTAT-GTCTCGCCCTGGCCTTCTCTAAAGCTG  1093
      || ||||||||   ||| |||| ||||||||||| | |||||| ||||  
seq2  TA-CCTACTATTGCCTACCTATGGTCTCGCCCTGACTTTCTCTTAAGCCT  1099

seq1  GCTGCTATCGACCCAGCTCTCTT  1116
      ||||||||||||| |||| ||||
seq2  GCTGCTATCGACCAAGCT-TCTT  1121


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