BAC Information

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BAC

Clone NameB6Ng01-321C18
Chromosome8 (Build37)
Map Location 33,628,673 - 33,629,829
singlet/doubletsinglet
Overlap genenone
Upstream geneEG330731, LOC100041340, Nrg1, 2010007E15Rik, EG666589, EG546052
Downstream geneLOC100042715, LOC628408, EG628412, Wrn, Purg, LOC666630, Hmgb1-rs17
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-321C18.bB6Ng01-321C18.g
ACCGA110351GA110352
length1,1851,164
definitionB6Ng01-321C18.b B6Ng01-321C18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacacaataaaagcaatatacagcaaacca
acagccaatatcaaattaaaatggagagaaacttgaagcaatcccactag
gttgcccactctcttgctatctgttcaatatagtacttgaagttctagct
agagaaataagacaacaaaaggagatcaaggggatacaaattggaaagga
aaaagtcaagatatcaccatttgtggatgacatgatagtatgcataaatg
acccaaaaattctaccagagatcttctacatctgaaaaacaacttcatca
aagtggctggataaaaaattaactcaaacatatcagtagccttcctttat
acaagtggtaaacaaactgagaaagaaaatagggaaacaacacccttcac
aatagtcacatcttgatgtaactctaaccaaacaagtgaaagatctgtat
gacaaaaacttcaagtccctgaataaaaaagtcaaagaagacctcagaag
atgggaacatctcccatgcttgtggattagtagtattaataggaaaatat
ggctatcttaccaaaagcaacatacagactcgatgcaatccccatcaaaa
ctccaacacaattcttcacagacatgagaagagtaactctcaacttcata
tggaaaaacaaacaaacaaacaaaaaaccaaaaaaaccaagatagcagaa
atacttctaaacaataacagaacttctgggcgaatcaccatctctgacct
caagctgtactacagagcaataatgataacaactgcatggtattggtata
gagatagacaggacaatcagtggcatgaaaccgaagacctagaaataaac
ccatatacttatggacacttgatctttgccaaagaaaccaaagccataca
atgaaaaaaaaaaaaaaaaaaacgaaagaaagcatcttcaacaaatggtg
ctgggtctaactggttgtctgcatgtagaagattgtgtattgaactgtat
ttatctccttgtacaaagctcagtcaagtggacaaaggtcctttcacata
aaacagaatacactcatctaagagagagaaagttaggaaccggactcaac
acatgcacagaagcattttctgaaccgaacaccaatggctagctgtagac
catatgacatgactcatgaactgaaaagcttctcg
gaattcttgtcctctggaagaacagcaagtactcttaacttctgaacaat
ccctctagtgccagaccacttcttaaaatcacatttcacttatgaggaaa
atctaaaagaaatgatcagattcccggggttatgtgaataccaaatttaa
acaaaaccaatataaaaaaattcaaacagatctataacaatcattgctat
taaaacatcaattcaaatccccaccaaactgcaacatcaacaacaaaaaa
tgatcagaccttgtttaacacattatagatagaatgcatcagaccttaaa
aatgctgttcaaattatttcatagaaaaggaaagactatttctgaacaca
ttctacaaagcctatattatactgataccaaaaccagttaaaggaacaaa
aaaaattaaatgtatatctcattaattaacatagaatcaaaggttctcat
aaaatactttgggaaacatggttcagtgatcaagagcagttgctgctcct
gcagaagacccatgttttgtttctgggacctgaatgtcatcatcatacaa
ccttctttaactccagatgcaagggttttccacccccttctggcttccaa
aggtaccacatccacagtgtactcagatgtatgcaggcaacgcactcata
tacataaaatgaaaataaataaatcctccaaagcaaagcattaagccacg
attgtgtcatactttgctaatatcagaatccagactcctcagtattctaa
attggactgaagacctgttgatcttcaggaatcttctaggccttcatcat
cagacaggtatggtgtagttccaacaccatgtctatagaataagcaacta
ctgggttccagtttctccaccatccagatgtctattgtcaaactacttag
ctggagttgtataagtcaatccactcagtcccctttgtaatatatatatt
cactctatccattcagttcctctagagaactctgactagtacaggaaatg
aacagagtgtttcttcaagaggaaatattaaacagccagtaaacacttag
aagcactcagcatcttttacttgttcaggagatgccaaattacactactt
tggatattttctattcttctcactccaggtcatagtgacatcattcaagg
aaacctagtaacaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_33628673_33629829
seq2: B6Ng01-321C18.g_67_1230

seq1  GAATTCTTGTCCTCTGGAAGAACAGCAAGTACTCTTAACTTCTGAACAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTCCTCTGGAAGAACAGCAAGTACTCTTAACTTCTGAACAAT  50

seq1  CCCTCTAGTGCCAGACCACTTCTTAAAATCACATTTCACTTATGAGGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTAGTGCCAGACCACTTCTTAAAATCACATTTCACTTATGAGGAAA  100

seq1  ATCTAAAAGAAATGATCAGATTCCCGGGGTTATGTGAATACCAAATTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAAAGAAATGATCAGATTCCCGGGGTTATGTGAATACCAAATTTAA  150

seq1  ACAAAACCAATATAAAAAAATTCAAACAGATCTATAACAATCATTGCTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACCAATATAAAAAAATTCAAACAGATCTATAACAATCATTGCTAT  200

seq1  TAAAACATCAATTCAAATCCCCACCAAACTGCAACATCAACAACAAAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACATCAATTCAAATCCCCACCAAACTGCAACATCAACAACAAAAAA  250

seq1  TGATCAGACCTTGTTTAACACATTATAGATAGAATGCATCAGACCTTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCAGACCTTGTTTAACACATTATAGATAGAATGCATCAGACCTTAAA  300

seq1  AATGCTGTTCAAATTATTTCATAGAAAAGGAAAGACTATTTCTGAACACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTGTTCAAATTATTTCATAGAAAAGGAAAGACTATTTCTGAACACA  350

seq1  TTCTACAAAGCCTATATTATACTGATACCAAAACCAGTTAAAGGAACAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACAAAGCCTATATTATACTGATACCAAAACCAGTTAAAGGAACAAA  400

seq1  AAAAATTAAATGTATATCTCATTAATTAACATAGAATCAAAGGTTCTCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTAAATGTATATCTCATTAATTAACATAGAATCAAAGGTTCTCAT  450

seq1  AAAATACTTTGGGAAACATGGTTCAGTGATCAAGAGCAGTTGCTGCTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACTTTGGGAAACATGGTTCAGTGATCAAGAGCAGTTGCTGCTCCT  500

seq1  GCAGAAGACCCATGTTTTGTTTCTGGGACCTGAATGTCATCATCATACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAGACCCATGTTTTGTTTCTGGGACCTGAATGTCATCATCATACAA  550

seq1  CCTTCTTTAACTCCAGATGCAAGGGTTTTCCACCCCCTTCTGGCTTCCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTTTAACTCCAGATGCAAGGGTTTTCCACCCCCTTCTGGCTTCCAA  600

seq1  AGGTACCACATCCACAGTGTACTCAGATGTATGCAGGCAACGCACTCATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACCACATCCACAGTGTACTCAGATGTATGCAGGCAACGCACTCATA  650

seq1  TACATAAAATGAAAATAAATAAATCCTCCAAAGCAAAGCATTAAGCCACG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAAAATGAAAATAAATAAATCCTCCAAAGCAAAGCATTAAGCCACG  700

seq1  ATTGTGTCATACTTTGCTAATATCAGAATCCAGACTCCTCAGTATTCTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGTCATACTTTGCTAATATCAGAATCCAGACTCCTCAGTATTCTAA  750

seq1  ATTGGACTGAAGACCTGTTGATCTTCAGGAATCTTCTAGGCCTTCATCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGACTGAAGACCTGTTGATCTTCAGGAATCTTCTAGGCCTTCATCAT  800

seq1  CAGACAGGTATGGTGTAGTTCCAACACCATGTCTATAGAATAAGCAACTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAGGTATGGTGTAGTTCCAACACCATGTCTATAGAATAAGCAACTA  850

seq1  CTGGGTTCCAGTTTCTCCACCATCCAGATGTCTATTGTCAAACTACTTAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTTCCAGTTTCTCCACCATCCAGATGTCTATTGTCAAACTACTTAG  900

seq1  CTGGAGTTGTATAAGTCAATCCACTCAGTCCCCTTTGTAATATATATATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGTTGTATAAGTCAATCCACTCAGTCCCCTTTGTAATATATATATT  950

seq1  CACTCTATCCATTCAGTTCCTCTAGAGAACTCTGACTAGTACAGGAAATG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTATCCATTCAGTTCCTCTAGAGAACTCTGACTAGTACAGGAAATG  1000

seq1  AACAGAGTG-TTCTTCAAGAAGAAATA-TAAACAGCCAGTAAACACTTTA  1048
      ||||||||| |||||||||| |||||| |||||||||||||||||| |||
seq2  AACAGAGTGTTTCTTCAAGAGGAAATATTAAACAGCCAGTAAACAC-TTA  1049

seq1  GAAAGCACTCAGCATCTTTAACT--GTCAGGAAGATG-CAAATTACAACT  1095
      | ||||||||||||||||| |||   ||||| ||||| |||||||| |||
seq2  G-AAGCACTCAGCATCTTTTACTTGTTCAGG-AGATGCCAAATTAC-ACT  1096

seq1  ACTTTG---ATATTCTA----TCTCACTCCA-GTCATAGTGACCATCA-T  1136
      ||||||   || |||||    |||||||||| |||||||||| ||||| |
seq2  ACTTTGGATATTTTCTATTCTTCTCACTCCAGGTCATAGTGA-CATCATT  1145

seq1  CAAGGAAACTAAAGGTAACAA  1157
      |||||||||  |  |||||||
seq2  CAAGGAAACCTA--GTAACAA  1164