BAC Information

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BAC

Clone NameB6Ng01-321F02
Chromosome8 (Build37)
Map Location 105,042,385 - 105,043,359
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneCdh11, EG667618, LOC100041368, 1600027J07Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-321F02.bB6Ng01-321F02.g
ACCGA110458GA110459
length971932
definitionB6Ng01-321F02.b B6Ng01-321F02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacaaattattcaaaacttctcaaggaagtaatttatcatctcag
tggaggcagagtagtgggctttcaatgatagaacatttatggaagtgggt
ctatcagtgtcttttaattatgagaaaataatgttctcgagaaggtaagt
gatgtccataatcctataacaaaattagcagaatcaaccagtattatttt
gtgattctagtttatcatgggcgctttactgctattttagatgatatctg
atttaatgaattatttgaaattaaagacattttcattttggttttgtttc
aaaatctttcttcagtttggctgtctctagagactttcagaaccaacatg
attagatgtatttgaaagtatgcttgggggagaaaagaatcaactggtct
ctatggaatgagtccctcctctcttatgataagattaaagaaataaggaa
gtttagtactatttttatggttgatttgagaaagtggatgagatagggac
aattgttatgtatcttataagaagaagcagcgcagaagacggatgttgaa
gacttgaagaagaatctttttctttataacagagagagggaaaaaacaca
aggaatattataggtcccagtaaaatgtttctaacatctgcacagttgcc
tgttttatgatatactgaagaaagagggttggtgcaattaggagcagttc
tatattaactcttgcataattcttctctgcctttacatcccatagagggt
gattaatatggtaatgacagtcttcatgtgctcttgagttaaccaccagt
atgattgggaaagacacttgtggaagtgttaagcaagaggttttgcccaa
cataggttctgttagatgagcttatgtatttgtccaggatcccttgggcc
cattacaaatgctattgatttgtgtgtaatctgattgctgctttaacaat
aatgcttaattcctttggctt
gaattcctgatctttctaagtcttttatcatgaatccatgttggattttc
tcaaatgctttctcagcatctaacaagatgatcatgtggtttttgtattt
gagtttgtttatatactggattacgttgatagatttccatatattaaacc
atccctgcatccctggaataaaatctacttggtcaggatggatgattgtt
tgatgtgttcttggatttgtttagtgagaacttttttagggatttttaca
ttgatattcataagggaaattgggcttaagttctctatctttgttgggtc
tttctgtggtttaggtatcagagtaattgtggcttcatagaaagagctgg
gtagagtaccttctgcttctattttgtggaatagtttgtgaagaactggg
attagaccttctttaaaggtctgatagaactctacactaaacccatctgg
tcctggtatattattggttgggagactattaatgactgcttctatttctt
taggggatataggagtgtttagatcattcacctgatcatgatttcacttt
ggtaccaaggatttatctttaaagctggatttttccccgctaattgacaa
ttcttgagtatcatccaggatcagaacagaaaccatgtgtacttaagtct
ttcatcatttactctttgagctaaaaatacccactctaagatgttttctt
ctctctgattaagaattcctatggggagaatgagtaaaaggcaaattact
aaggtgcattcaagccttggatccaacaacccacatgagcatcctgaaat
ctcttttctaccagagccagttcttgctcggcctcaactgataattttct
tgactattcaagttcttatcaccttgtaaggcttgaagtacttactaacc
tttggagaagttaaaaacaattgaagccatag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_105042385_105043359
seq2: B6Ng01-321F02.b_45_1015 (reverse)

seq1  AAGCCAAAGGAATAAAGCATTTATTGTTAAAGCAAGCAATCAGATTACAC  50
      ||||||||||||| ||||| ||||||||||||| ||||||||||||||||
seq2  AAGCCAAAGGAATTAAGCA-TTATTGTTAAAGC-AGCAATCAGATTACAC  48

seq1  ACAAATCAAATAGCATTTGTTATGGGCCCAAGGGATCCCTGGAACAAATA  100
      ||||||| |||||||||||| ||||||||||||||| ||||| |||||||
seq2  ACAAATC-AATAGCATTTGTAATGGGCCCAAGGGAT-CCTGG-ACAAATA  95

seq1  CATAAGCTCATCTAACAG-ACCTATGTTGGGCAAAACCTCTTGCTTAACA  149
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CATAAGCTCATCTAACAGAACCTATGTTGGGCAAAACCTCTTGCTTAACA  145

seq1  CTTCCACAAGTGTCTTTCCCAATCATACTGGTGGTTAACTCAAGAGCACA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCACAAGTGTCTTTCCCAATCATACTGGTGGTTAACTCAAGAGCACA  195

seq1  TGAAGACTGTCATTACCATATTAATCACCCTCTATGGGATGTAAAGGCAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGACTGTCATTACCATATTAATCACCCTCTATGGGATGTAAAGGCAG  245

seq1  AGAAGAATTATGCAAGAGTTAATATAGAACTGCTCCTAATTGCACCAACC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAATTATGCAAGAGTTAATATAGAACTGCTCCTAATTGCACCAACC  295

seq1  CTCTTTCTTCAGTATATCATAAAACAGGCAACTGTGCAGATGTTAGAAAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTCTTCAGTATATCATAAAACAGGCAACTGTGCAGATGTTAGAAAC  345

seq1  ATTTTACTGGGACCTATAATATTCCTTGTGTTTTTTCCCTCTCTCTGTTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTACTGGGACCTATAATATTCCTTGTGTTTTTTCCCTCTCTCTGTTA  395

seq1  TAAAGAAAAAGATTCTTCTTCAAGTCTTCAACATCCGTCTTCTGCGCTGC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAAAAAGATTCTTCTTCAAGTCTTCAACATCCGTCTTCTGCGCTGC  445

seq1  TTCTTCTTATAAGATACATAACAATTGTCCCTATCTCATCCACTTTCTCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTTATAAGATACATAACAATTGTCCCTATCTCATCCACTTTCTCA  495

seq1  AATCAACCATAAAAATAGTACTAAACTTCCTTATTTCTTTAATCTTATCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAACCATAAAAATAGTACTAAACTTCCTTATTTCTTTAATCTTATCA  545

seq1  TAAGAGAGGAGGGACTCATTCCATAGAGACCAGTTGATTCTTTTCTCCCC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGAGGAGGGACTCATTCCATAGAGACCAGTTGATTCTTTTCTCCCC  595

seq1  CAAGCATACTTTCAAATACATCTAATCATGTTGGTTCTGAAAGTCTCTAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCATACTTTCAAATACATCTAATCATGTTGGTTCTGAAAGTCTCTAG  645

seq1  AGACAGCCAAACTGAAGAAAGATTTTGAAACAAAACCAAAATGAAAATGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGCCAAACTGAAGAAAGATTTTGAAACAAAACCAAAATGAAAATGT  695

seq1  CTTTAATTTCAAATAATTCATTAAATCAGATATCATCTAAAATAGCAGTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAATTTCAAATAATTCATTAAATCAGATATCATCTAAAATAGCAGTA  745

seq1  AAGCGCCCATGATAAACTAGAATCACAAAATAATACTGGTTGATTCTGCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCGCCCATGATAAACTAGAATCACAAAATAATACTGGTTGATTCTGCT  795

seq1  AATTTTGTTATAGGATTATGGACATCACTTACCTTCTCGAGAACATTATT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTGTTATAGGATTATGGACATCACTTACCTTCTCGAGAACATTATT  845

seq1  TTCTCATAATTAAAAGACACTGATAGACCCACTTCCATAAATGTTCTATC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCATAATTAAAAGACACTGATAGACCCACTTCCATAAATGTTCTATC  895

seq1  ATTGAAAGCCCACTACTCTGCCTCCACTGAGATGATAAATTACTTCCTTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAAGCCCACTACTCTGCCTCCACTGAGATGATAAATTACTTCCTTG  945

seq1  AGAAGTTTTGAATAATTTGTGAATTC  975
      ||||||||||||||||||||||||||
seq2  AGAAGTTTTGAATAATTTGTGAATTC  971